Literature DB >> 28120712

DNA Damage-inducing Compounds: Unraveling their Pleiotropic Effects Using High Throughput Sequencing.

Sebastian Müller1.   

Abstract

Compounds causing DNA damage have been used widely in molecular biology and some are used as therapeutic agents in cancer therapy. In most cases, their cellular response is pleiotropic, making it challenging to develop these agents efficiently for potential therapeutic use. Furthermore, this means that such compounds can also affect healthy tissues, which is a major drawback for the use in therapy. Thus, dissecting and understanding not only their molecular mode of action, but also identifying all their cellular targets is critical. With the advent of high throughput DNA sequencing technologies our understanding of the genomic targets of such compounds has increased significantly over recent years. This review gives an overview of some well-studied DNA-damaging agents and dissects what is known about their molecular mode of action, their cellular response and use in clinical settings. It then describes how high throughput-sequencing approaches can be used (a) to study DNAdamaging compounds and (b) to gain insight into their biological activity in vivo. Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.org.

Entities:  

Keywords:  DDR; DNA damage; chemical biology; drug; next generation sequencing; sequencing; small molecule

Mesh:

Substances:

Year:  2017        PMID: 28120712     DOI: 10.2174/0929867324666170124143710

Source DB:  PubMed          Journal:  Curr Med Chem        ISSN: 0929-8673            Impact factor:   4.530


  3 in total

1.  Clonogenic Assays to Detect Cell Fate in Mitotic Catastrophe.

Authors:  José Manuel Bravo-San Pedro; Oliver Kepp; Allan Sauvat; Santiago Rello-Varona; Guido Kroemer; Laura Senovilla
Journal:  Methods Mol Biol       Date:  2021

2.  Biolayer interferometry provides a robust method for detecting DNA binding small molecules in microbial extracts.

Authors:  Ross D Overacker; Birte Plitzko; Sandra Loesgen
Journal:  Anal Bioanal Chem       Date:  2020-11-25       Impact factor: 4.142

3.  Small Molecule Regulators of Ferroptosis.

Authors:  Sylvain Debieu; Stéphanie Solier; Ludovic Colombeau; Antoine Versini; Fabien Sindikubwabo; Alison Forrester; Sebastian Müller; Tatiana Cañeque; Raphaël Rodriguez
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

  3 in total

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