Literature DB >> 28120227

High Resolution X-ray Diffraction Dataset for Bacillus licheniformis Gamma Glutamyl Transpeptidase-acivicin complex: SUMO-Tag Renders High Expression and Solubility.

Shobha Kumari1, Ravi Kant Pal2, Rani Gupta3, Manisha Goel4.   

Abstract

Gamma glutamyl transpeptidase, (GGT) is a ubiquitous protein which plays a central role in glutathione metabolism and has myriad clinical implications. It has been shown to be a virulence factor for pathogenic bacteria, inhibition of which results in reduced colonization potential. However, existing inhibitors are effective but toxic and therefore search is on for novel inhibitors, which makes it imperative to understand the interactions of various inhibitors with the protein in substantial detail. High resolution structures of protein bound to different inhibitors can serve this purpose. Gamma glutamyl transpeptidase from Bacillus licheniformis is one of the model systems that have been used to understand the structure-function correlation of the protein. The structures of the native protein (PDB code 4OTT), of its complex with glutamate (PDB code 4OTU) and that of its precursor mimic (PDB code 4Y23) are available, although at moderate/low resolution. In the present study, we are reporting the preliminary analysis of, high resolution X-ray diffraction data collected for the co-crystals of B. licheniformis, Gamma glutamyl transpeptidase, with its inhibitor, Acivicin. Crystals belong to the orthorhombic space group P212121 and diffract X-ray to 1.45 Å resolution. This is the highest resolution data reported for all GGT structures available till now. The use of SUMO fused expression system enhanced yield of the target protein in the soluble fraction, facilitating recovery of protein with high purity. The preliminary analysis of this data set shows clear density for the inhibitor, acivicin, in the protein active site.

Entities:  

Keywords:  Acivicin; Bacillus licheniformis; Gamma glutamyl transpeptidase; High resolution X-ray diffraction data; Inhibitor binding; SUMO-Tag expression system

Mesh:

Substances:

Year:  2017        PMID: 28120227     DOI: 10.1007/s10930-017-9693-2

Source DB:  PubMed          Journal:  Protein J        ISSN: 1572-3887            Impact factor:   2.371


  40 in total

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2.  Characterization and functional analysis of the cis-autoproteolysis active center of glycosylasparaginase.

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3.  Production of bioactive γ-glutamyl transpeptidase in Escherichia coli using SUMO fusion partner and application of the recombinant enzyme to L-theanine synthesis.

Authors:  Qi Wang; Cui Min; Fenfen Zhu; Yinqiang Xin; Shuangquan Zhang; Lan Luo; Zhimin Yin
Journal:  Curr Microbiol       Date:  2011-02-17       Impact factor: 2.188

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Authors:  Simon S Terzyan; Anthony W G Burgett; Annie Heroux; Clyde A Smith; Blaine H M Mooers; Marie H Hanigan
Journal:  J Biol Chem       Date:  2015-05-26       Impact factor: 5.157

5.  Crystal structure of the halotolerant gamma-glutamyltranspeptidase from Bacillus subtilis in complex with glutamate reveals a unique architecture of the solvent-exposed catalytic pocket.

Authors:  Kei Wada; Machiko Irie; Hideyuki Suzuki; Keiichi Fukuyama
Journal:  FEBS J       Date:  2010-01-20       Impact factor: 5.542

6.  Heterogeneous nucleation helps the search for initial crystallization conditions of γ-glutamyl transpeptidase from Bacillus licheniformis.

Authors:  Long Liu Lin; Antonello Merlino
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-05-25

7.  The maturation mechanism of γ-glutamyl transpeptidases: Insights from the crystal structure of a precursor mimic of the enzyme from Bacillus licheniformis and from site-directed mutagenesis studies.

Authors:  Andrea Pica; Meng-Chun Chi; Yi-Yu Chen; Marco d'Ischia; Long-Liu Lin; Antonello Merlino
Journal:  Biochim Biophys Acta       Date:  2015-10-30

8.  Crystal structure of acivicin-inhibited gamma-glutamyltranspeptidase reveals critical roles for its C-terminus in autoprocessing and catalysis.

Authors:  Kristin Williams; Sierra Cullati; Aaron Sand; Ekaterina I Biterova; Joseph J Barycki
Journal:  Biochemistry       Date:  2009-03-24       Impact factor: 3.162

9.  "Phylogenetic and evolutionary analysis of functional divergence among Gamma glutamyl transpeptidase (GGT) subfamilies".

Authors:  Ved Vrat Verma; Rani Gupta; Manisha Goel
Journal:  Biol Direct       Date:  2015-09-14       Impact factor: 4.540

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  1 in total

1.  Generation of Native, Untagged Huntingtin Exon1 Monomer and Fibrils Using a SUMO Fusion Strategy.

Authors:  Andreas Reif; Anass Chiki; Jonathan Ricci; Hilal A Lashuel
Journal:  J Vis Exp       Date:  2018-06-27       Impact factor: 1.355

  1 in total

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