Literature DB >> 28118540

Cloning, Stability, and Modification of Mycoplasma hominis Genome in Yeast.

Fabien Rideau1,2, Chloé Le Roy1,2, Elodie C T Descamps1,2, Hélène Renaudin1,2, Carole Lartigue3,4, Cécile Bébéar1,2.   

Abstract

Mycoplasma hominis is a minimal human pathogen that is responsible for genital and neonatal infections. Despite many attempts, there is no efficient genetic tool to manipulate this bacterium, limiting most investigations of its pathogenicity and its uncommon energy metabolism that relies on arginine. The recent cloning and subsequent engineering of other mycoplasma genomes in yeast opens new possibilities for studies of the genomes of genetically intractable organisms. Here, we report the successful one-step cloning of the M. hominis PG21 genome in yeast using the transformation-associated recombination (TAR) cloning method. At low passages, the M. hominis genome cloned into yeast displayed a conserved size. However, after ∼60 generations in selective media, this stability was affected, and large degradation events were detected, raising questions regarding the stability of large heterologous DNA molecules cloned in yeast and the need to minimize host propagation. Taking these results into account, we selected early passage yeast clones and successfully modified the M. hominis PG21 genome using the CRISPR/Cas9 editing tool, available in Saccharomyces cerevisiae. Complete M. hominis PG21 genomes lacking the adhesion-related vaa gene were efficiently obtained.

Entities:  

Keywords:  CRISPR/Cas9; Mycoplasma hominis; Vaa; genome stability; transformation-associated recombination (TAR) cloning; yeast centromeric plasmid

Mesh:

Year:  2017        PMID: 28118540     DOI: 10.1021/acssynbio.6b00379

Source DB:  PubMed          Journal:  ACS Synth Biol        ISSN: 2161-5063            Impact factor:   5.110


  5 in total

1.  Mycoplasma pneumoniae Genome Editing Based on Oligo Recombineering and Cas9-Mediated Counterselection.

Authors:  Carlos Piñero-Lambea; Eva Garcia-Ramallo; Sira Martinez; Javier Delgado; Luis Serrano; Maria Lluch-Senar
Journal:  ACS Synth Biol       Date:  2020-06-22       Impact factor: 5.110

2.  Generation of Mycoplasma hominis gene-targeted mutants by targeting-induced local lesions in genomes (TILLING).

Authors:  S Pereyre; C Bénard; C Brès; C Le Roy; J P Mauxion; F Rideau; P Sirand-Pugnet; B Henrich; C Bébéar
Journal:  BMC Genomics       Date:  2018-07-09       Impact factor: 3.969

3.  Random transposon insertion in the Mycoplasma hominis minimal genome.

Authors:  Fabien Rideau; Chloé Le Roy; Eveline Sagné; Hélène Renaudin; Sabine Pereyre; Birgit Henrich; Emilie Dordet-Frisoni; Christine Citti; Carole Lartigue; Cécile Bébéar
Journal:  Sci Rep       Date:  2019-09-19       Impact factor: 4.379

Review 4.  Synthetic Genomics From a Yeast Perspective.

Authors:  Charlotte C Koster; Eline D Postma; Ewout Knibbe; Céline Cleij; Pascale Daran-Lapujade
Journal:  Front Bioeng Biotechnol       Date:  2022-03-21

Review 5.  Budding yeast as a factory to engineer partial and complete microbial genomes.

Authors:  Sanjay Vashee; Yonathan Arfi; Carole Lartigue
Journal:  Curr Opin Syst Biol       Date:  2020-09-21
  5 in total

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