Literature DB >> 28117666

Novel adverse outcome pathways revealed by chemical genetics in a developing marine fish.

Elin Sørhus1,2, John P Incardona3, Tomasz Furmanek1, Giles W Goetz3, Nathaniel L Scholz3, Sonnich Meier1, Rolf B Edvardsen1, Sissel Jentoft2,4.   

Abstract

Crude <span class="Chemical">oil spills are a worldwide ocean conservation threat. Fish are particularly vulnerable to the oiling of spawning habitats, and crude oil causes severe abnormalities in embryos and larvae. However, the underlying mechanisms for these developmental defects are not well understood. Here, we explore the transcriptional basis for four discrete crude oil injury phenotypes in the early life stages of the commercially important Atlantic haddock (Melanogrammus aeglefinus). These include defects in (1) cardiac form and function, (2) craniofacial development, (3) ionoregulation and fluid balance, and (4) cholesterol synthesis and homeostasis. Our findings suggest a key role for intracellular calcium cycling and excitation-transcription coupling in the dysregulation of heart and jaw morphogenesis. Moreover, the disruption of ionoregulatory pathways sheds new light on buoyancy control in marine fish embryos. Overall, our chemical-genetic approach identifies initiating events for distinct adverse outcome pathways and novel roles for individual genes in fundamental developmental processes.

Entities:  

Keywords:  Atlantic haddock; cardiac abnormalities; chemical genetics; craniofacial abnormalities; crude oil; ecology; evolutionary biology; genomics; transcriptome

Mesh:

Substances:

Year:  2017        PMID: 28117666      PMCID: PMC5302885          DOI: 10.7554/eLife.20707

Source DB:  PubMed          Journal:  Elife        ISSN: 2050-084X            Impact factor:   8.140


  88 in total

Review 1.  Adverse outcome pathways: a conceptual framework to support ecotoxicology research and risk assessment.

Authors:  Gerald T Ankley; Richard S Bennett; Russell J Erickson; Dale J Hoff; Michael W Hornung; Rodney D Johnson; David R Mount; John W Nichols; Christine L Russom; Patricia K Schmieder; Jose A Serrrano; Joseph E Tietge; Daniel L Villeneuve
Journal:  Environ Toxicol Chem       Date:  2010-03       Impact factor: 3.742

2.  Normal function of Myf5 during gastrulation is required for pharyngeal arch cartilage development in zebrafish embryos.

Authors:  Cheng-Yung Lin; Hung-Chieh Lee; Hung-Chun Chen; Chi-Cheng Hsieh; Huai-Jen Tsai
Journal:  Zebrafish       Date:  2013-08-31       Impact factor: 1.985

3.  Differential expression in RNA-seq: a matter of depth.

Authors:  Sonia Tarazona; Fernando García-Alcalde; Joaquín Dopazo; Alberto Ferrer; Ana Conesa
Journal:  Genome Res       Date:  2011-09-08       Impact factor: 9.043

4.  Myosin heavy chain expression in cranial, pectoral fin, and tail muscle regions of zebrafish embryos.

Authors:  Mou-Yun Peng; Hui-Ju Wen; Li-Jane Shih; Ching-Ming Kuo; Sheng-Ping L Hwang
Journal:  Mol Reprod Dev       Date:  2002-12       Impact factor: 2.609

5.  Cloning and expression analysis of Fgf5, 6 and 7 during early chick development.

Authors:  Megha Kumar; Susan C Chapman
Journal:  Gene Expr Patterns       Date:  2012-05-24       Impact factor: 1.224

6.  Defects in cardiac function precede morphological abnormalities in fish embryos exposed to polycyclic aromatic hydrocarbons.

Authors:  John P Incardona; Tracy K Collier; Nathaniel L Scholz
Journal:  Toxicol Appl Pharmacol       Date:  2004-04-15       Impact factor: 4.219

7.  Crude oil impairs cardiac excitation-contraction coupling in fish.

Authors:  Fabien Brette; Ben Machado; Caroline Cros; John P Incardona; Nathaniel L Scholz; Barbara A Block
Journal:  Science       Date:  2014-02-14       Impact factor: 47.728

8.  AhR-mediated changes in global gene expression in rat liver progenitor cells.

Authors:  Dagmar Faust; Jan Vondráček; Pavel Krčmář; Lenka Smerdová; Jiřina Procházková; Eva Hrubá; Petra Hulinková; Bernd Kaina; Cornelia Dietrich; Miroslav Machala
Journal:  Arch Toxicol       Date:  2012-11-30       Impact factor: 5.153

9.  Aryl hydrocarbon receptor-independent toxicity of weathered crude oil during fish development.

Authors:  John P Incardona; Mark G Carls; Hiroki Teraoka; Catherine A Sloan; Tracy K Collier; Nathaniel L Scholz
Journal:  Environ Health Perspect       Date:  2005-12       Impact factor: 9.031

10.  Spiperone enhances intracellular calcium level and inhibits the Wnt signaling pathway.

Authors:  Desheng Lu; Dennis A Carson
Journal:  BMC Pharmacol       Date:  2009-11-30
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  8 in total

1.  Embryonic Crude Oil Exposure Impairs Growth and Lipid Allocation in a Keystone Arctic Forage Fish.

Authors:  Benjamin J Laurel; Louise A Copeman; Paul Iseri; Mara L Spencer; Greg Hutchinson; Trond Nordtug; Carey E Donald; Sonnich Meier; Sarah E Allan; Daryle T Boyd; Gina M Ylitalo; James R Cameron; Barbara L French; Tiffany L Linbo; Nathaniel L Scholz; John P Incardona
Journal:  iScience       Date:  2019-08-30

Review 2.  Polyaromatic hydrocarbons in pollution: a heart-breaking matter.

Authors:  C R Marris; S N Kompella; M R Miller; J P Incardona; F Brette; J C Hancox; E Sørhus; H A Shiels
Journal:  J Physiol       Date:  2020-01       Impact factor: 5.182

3.  Screening ToxCast™ for Chemicals That Affect Cholesterol Biosynthesis: Studies in Cell Culture and Human Induced Pluripotent Stem Cell-Derived Neuroprogenitors.

Authors:  Phillip A Wages; Piyush Joshi; Keri A Tallman; Hye-Young H Kim; Aaron B Bowman; Ned A Porter
Journal:  Environ Health Perspect       Date:  2020-01-27       Impact factor: 9.031

4.  Combined effects of crude oil exposure and warming on eggs and larvae of an arctic forage fish.

Authors:  Morgan Lizabeth Bender; Julia Giebichenstein; Ragnar N Teisrud; Jennifer Laurent; Marianne Frantzen; James P Meador; Lisbet Sørensen; Bjørn Henrik Hansen; Helena C Reinardy; Benjamin Laurel; Jasmine Nahrgang
Journal:  Sci Rep       Date:  2021-04-16       Impact factor: 4.379

5.  Brazilian silverside, Atherinella brasiliensis (Quoy & Gaimard,1825) embryos as a test-species for marine fish ecotoxicological tests.

Authors:  Natália Martins Feitosa; Emiliano Nicolas Calderon; Rhennã Nascimento da Silva; Sônia Lopes Rezende de Melo; Jackson Souza-Menezes; Rodrigo Nunes-da-Fonseca; Márcia Vieira Reynier
Journal:  PeerJ       Date:  2021-04-14       Impact factor: 2.984

6.  Oil droplet fouling and differential toxicokinetics of polycyclic aromatic hydrocarbons in embryos of Atlantic haddock and cod.

Authors:  Lisbet Sørensen; Elin Sørhus; Trond Nordtug; John P Incardona; Tiffany L Linbo; Laura Giovanetti; Ørjan Karlsen; Sonnich Meier
Journal:  PLoS One       Date:  2017-07-05       Impact factor: 3.240

7.  Genomic architecture of haddock (Melanogrammus aeglefinus) shows expansions of innate immune genes and short tandem repeats.

Authors:  Ole K Tørresen; Marine S O Brieuc; Monica H Solbakken; Elin Sørhus; Alexander J Nederbragt; Kjetill S Jakobsen; Sonnich Meier; Rolf B Edvardsen; Sissel Jentoft
Journal:  BMC Genomics       Date:  2018-04-10       Impact factor: 3.969

8.  Effects of Exposure to Low Concentrations of Oil on the Expression of Cytochrome P4501a and Routine Swimming Speed of Atlantic Haddock (Melanogrammus aeglefinus) Larvae In Situ.

Authors:  Alessandro Cresci; Claire B Paris; Howard I Browman; Anne Berit Skiftesvik; Steven Shema; Reidun Bjelland; Caroline M F Durif; Matthew Foretich; Camilla Di Persia; Veronica Lucchese; Frode B Vikebø; Elin Sørhus
Journal:  Environ Sci Technol       Date:  2020-10-20       Impact factor: 11.357

  8 in total

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