Literature DB >> 28115382

Development of oriC-Based Plasmids for Mesoplasma florum.

Dominick Matteau1, Marie-Eve Pepin1, Vincent Baby1, Samuel Gauthier1, Mélissa Arango Giraldo1, Thomas F Knight2, Sébastien Rodrigue3.   

Abstract

The near-minimal bacterium Mesoplasma florum constitutes an attractive model for systems biology and for the development of a simplified cell chassis in synthetic biology. However, the lack of genetic engineering tools for this microorganism has limited our capacity to understand its basic biology and modify its genome. To address this issue, we have evaluated the susceptibility of M. florum to common antibiotics and developed the first generation of artificial plasmids able to replicate in this bacterium. Selected regions of the predicted M. florum chromosomal origin of replication (oriC) were used to create different plasmid versions that were tested for their transformation frequency and stability. Using polyethylene glycol-mediated transformation, we observed that plasmids harboring both rpmH-dnaA and dnaA-dnaN intergenic regions, interspaced or not with a copy of the dnaA gene, resulted in a frequency of ∼4.1 × 10-6 transformants per viable cell and were stably maintained throughout multiple generations. In contrast, plasmids containing only one M. florumoriC intergenic region or the heterologous oriC region of Mycoplasma capricolum, Mycoplasma mycoides, or Spiroplasma citri failed to produce any detectable transformants. We also developed alternative transformation procedures based on electroporation and conjugation from Escherichia coli, reaching frequencies up to 7.87 × 10-6 and 8.44 × 10-7 transformants per viable cell, respectively. Finally, we demonstrated the functionality of antibiotic resistance genes active against tetracycline, puromycin, and spectinomycin/streptomycin in M. florum Taken together, these valuable genetic tools will facilitate efforts toward building an M. florum-based near-minimal cellular chassis for synthetic biology.IMPORTANCEMesoplasma florum constitutes an attractive model for systems biology and for the development of a simplified cell chassis in synthetic biology. M. florum is closely related to the mycoides cluster of mycoplasmas, which has become a model for whole-genome cloning, genome transplantation, and genome minimization. However, M. florum shows higher growth rates than other Mollicutes, has no known pathogenic potential, and possesses a significantly smaller genome that positions this species among some of the simplest free-living organisms. So far, the lack of genetic engineering tools has limited our capacity to understand the basic biology of M. florum in order to modify its genome. To address this issue, we have evaluated the susceptibility of M. florum to common antibiotics and developed the first artificial plasmids and transformation methods for this bacterium. This represents a strong basis for ongoing genome engineering efforts using this near-minimal microorganism.
Copyright © 2017 American Society for Microbiology.

Entities:  

Keywords:  Mesoplasma; antibiotic markers; chromosomal origin of replication; plasmids; synthetic biology; transformation methods

Mesh:

Substances:

Year:  2017        PMID: 28115382      PMCID: PMC5359490          DOI: 10.1128/AEM.03374-16

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  61 in total

1.  Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis.

Authors:  J Castresana
Journal:  Mol Biol Evol       Date:  2000-04       Impact factor: 16.240

2.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.

Authors:  K J Livak; T D Schmittgen
Journal:  Methods       Date:  2001-12       Impact factor: 3.608

3.  New plasmid vectors for specific gene targeting in Spiroplasma citri.

Authors:  Carole Lartigue; Sybille Duret; Monique Garnier; Joël Renaudin
Journal:  Plasmid       Date:  2002-09       Impact factor: 3.466

Review 4.  Molecular biology of mycoplasmas.

Authors:  K Dybvig; L L Voelker
Journal:  Annu Rev Microbiol       Date:  1996       Impact factor: 15.500

5.  A new family of mobilizable suicide plasmids based on broad host range R388 plasmid (IncW) and RP4 plasmid (IncPalpha) conjugative machineries and their cognate Escherichia coli host strains.

Authors:  Gaëlle Demarre; Anne-Marie Guérout; Chiho Matsumoto-Mashimo; Dean A Rowe-Magnus; Philippe Marlière; Didier Mazel
Journal:  Res Microbiol       Date:  2005-03       Impact factor: 3.992

6.  Specific gene targeting in Spiroplasma citri: improved vectors and production of unmarked mutations using site-specific recombination.

Authors:  Sybille Duret; Aurélie André; Joël Renaudin
Journal:  Microbiology       Date:  2005-08       Impact factor: 2.777

7.  Taxonomic descriptions of eight new non-sterol-requiring mollicutes assigned to the genus Mesoplasma.

Authors:  J G Tully; R F Whitcomb; K J Hackett; D L Rose; R B Henegar; J M Bové; P Carle; D L Williamson; T B Clark
Journal:  Int J Syst Bacteriol       Date:  1994-10

8.  Identification of the origin of replication of the Mycoplasma pulmonis chromosome and its use in oriC replicative plasmids.

Authors:  Caio M M Cordova; Carole Lartigue; Pascal Sirand-Pugnet; Joël Renaudin; Regina A F Cunha; A Blanchard
Journal:  J Bacteriol       Date:  2002-10       Impact factor: 3.490

9.  TreeDyn: towards dynamic graphics and annotations for analyses of trees.

Authors:  François Chevenet; Christine Brun; Anne-Laure Bañuls; Bernard Jacq; Richard Christen
Journal:  BMC Bioinformatics       Date:  2006-10-10       Impact factor: 3.169

10.  Being pathogenic, plastic, and sexual while living with a nearly minimal bacterial genome.

Authors:  Pascal Sirand-Pugnet; Carole Lartigue; Marc Marenda; Daniel Jacob; Aurélien Barré; Valérie Barbe; Chantal Schenowitz; Sophie Mangenot; Arnaud Couloux; Beatrice Segurens; Antoine de Daruvar; Alain Blanchard; Christine Citti
Journal:  PLoS Genet       Date:  2007-05-18       Impact factor: 5.917

View more
  4 in total

1.  Transformation of the Drosophila Sex-Manipulative Endosymbiont Spiroplasma poulsonii and Persisting Hurdles for Functional Genetic Studies.

Authors:  Florent Masson; Fanny Schüpfer; Chloé Jollivet; Bruno Lemaitre
Journal:  Appl Environ Microbiol       Date:  2020-07-02       Impact factor: 4.792

2.  Entry Exclusion of Conjugative Plasmids of the IncA, IncC, and Related Untyped Incompatibility Groups.

Authors:  Malika Humbert; Kévin T Huguet; Frédéric Coulombe; Vincent Burrus
Journal:  J Bacteriol       Date:  2019-04-24       Impact factor: 3.490

3.  Inferring the Minimal Genome of Mesoplasma florum by Comparative Genomics and Transposon Mutagenesis.

Authors:  Vincent Baby; Jean-Christophe Lachance; Jules Gagnon; Jean-François Lucier; Dominick Matteau; Tom Knight; Sébastien Rodrigue
Journal:  mSystems       Date:  2018-04-10       Impact factor: 6.496

4.  Genome-scale metabolic modeling reveals key features of a minimal gene set.

Authors:  Jean-Christophe Lachance; Dominick Matteau; Joëlle Brodeur; Colton J Lloyd; Nathan Mih; Zachary A King; Thomas F Knight; Adam M Feist; Jonathan M Monk; Bernhard O Palsson; Pierre-Étienne Jacques; Sébastien Rodrigue
Journal:  Mol Syst Biol       Date:  2021-07       Impact factor: 11.429

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.