Literature DB >> 28113886

A Deep Matrix Factorization Method for Learning Attribute Representations.

George Trigeorgis1, Konstantinos Bousmalis2, Stefanos Zafeiriou1, Bjorn W Schuller1.   

Abstract

Semi-Non-negative Matrix Factorization is a technique that learns a low-dimensional representation of a dataset that lends itself to a clustering interpretation. It is possible that the mapping between this new representation and our original data matrix contains rather complex hierarchical information with implicit lower-level hidden attributes, that classical one level clustering methodologies cannot interpret. In this work we propose a novel model, Deep Semi-NMF, that is able to learn such hidden representations that allow themselves to an interpretation of clustering according to different, unknown attributes of a given dataset. We also present a semi-supervised version of the algorithm, named Deep WSF, that allows the use of (partial) prior information for each of the known attributes of a dataset, that allows the model to be used on datasets with mixed attribute knowledge. Finally, we show that our models are able to learn low-dimensional representations that are better suited for clustering, but also classification, outperforming Semi-Non-negative Matrix Factorization, but also other state-of-the-art methodologies variants.

Year:  2016        PMID: 28113886     DOI: 10.1109/TPAMI.2016.2554555

Source DB:  PubMed          Journal:  IEEE Trans Pattern Anal Mach Intell        ISSN: 0098-5589            Impact factor:   6.226


  8 in total

1.  A Sparse Non-Negative Matrix Factorization Framework for Identifying Functional Units of Tongue Behavior From MRI.

Authors:  Jerry L Prince; Maureen Stone; Arnold D Gomez; Jordan R Green; Christopher J Hartnick; Thomas J Brady; Timothy G Reese; Van J Wedeen; Georges El Fakhri
Journal:  IEEE Trans Med Imaging       Date:  2018-09-18       Impact factor: 10.048

2.  A benchmark for comparing precision medicine methods in thyroid cancer diagnosis using tissue microarrays.

Authors:  Ching-Wei Wang; Yu-Ching Lee; Evelyne Calista; Fan Zhou; Hongtu Zhu; Ryohei Suzuki; Daisuke Komura; Shumpei Ishikawa; Shih-Ping Cheng
Journal:  Bioinformatics       Date:  2018-05-15       Impact factor: 6.937

3.  Assessing Methods for Evaluating the Number of Components in Non-Negative Matrix Factorization.

Authors:  José M Maisog; Andrew T DeMarco; Karthik Devarajan; S Stanley Young; Paul Fogel; George Luta
Journal:  Mathematics (Basel)       Date:  2021-11-09

4.  Identification of Multi-scale Hierarchical Brain Functional Networks Using Deep Matrix Factorization.

Authors:  Hongming Li; Xiaofeng Zhu; Yong Fan
Journal:  Med Image Comput Comput Assist Interv       Date:  2018-09-13

5.  Exploring generative deep learning for omics data using log-linear models.

Authors:  Moritz Hess; Maren Hackenberg; Harald Binder
Journal:  Bioinformatics       Date:  2020-12-22       Impact factor: 6.937

6.  Dissecting cascade computational components in spiking neural networks.

Authors:  Shanshan Jia; Dajun Xing; Zhaofei Yu; Jian K Liu
Journal:  PLoS Comput Biol       Date:  2021-11-29       Impact factor: 4.475

7.  Multi-radial LBP Features as a Tool for Rapid Glomerular Detection and Assessment in Whole Slide Histopathology Images.

Authors:  Olivier Simon; Rabi Yacoub; Sanjay Jain; John E Tomaszewski; Pinaki Sarder
Journal:  Sci Rep       Date:  2018-02-01       Impact factor: 4.379

8.  PCA via joint graph Laplacian and sparse constraint: Identification of differentially expressed genes and sample clustering on gene expression data.

Authors:  Chun-Mei Feng; Yong Xu; Mi-Xiao Hou; Ling-Yun Dai; Jun-Liang Shang
Journal:  BMC Bioinformatics       Date:  2019-12-30       Impact factor: 3.169

  8 in total

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