Literature DB >> 28111270

Fast preparation of a long chimeric armored RNA as controls for external quality assessment for molecular detection of Zika virus.

Guigao Lin1, Kuo Zhang2, Dong Zhang3, Yanxi Han4, Jiehong Xie5, Jinming Li6.   

Abstract

BACKGROUND: The emergence of Zika virus demands accurate laboratory diagnostics. Nucleic acid testing is currently the definitive method for diagnosis of Zika infection. In 2016, an external quality assurance (EQA) for assessing the quality of molecular testing of Zika virus was carried out in China.
METHODS: A single armored RNA encapsulating a 4942-nucleotides (nt) long specific RNA sequence of Zika virus was prepared and used as positive samples. A pre-tested EQA panel, consisting of 4 negative and 6 positive samples with different concentrations of armored RNA, was distributed to 38 laboratories that perform molecular detection of Zika virus.
RESULTS: A total of 39 data sets (1 laboratory used two test kits in parallel), produced by using commercial (n=38) or laboratory developed (n=1) quantitative reverse-transcriptase PCR (qRT-PCR) kits, were received. Of these, 35 (89.7%) had correct results for all 10 samples, and 4 (10.3%) reported at least 1 error (11 in total). The testing errors were all false-negatives, highlighting the need of improvements in detecting sensitivity.
CONCLUSIONS: The EQA reveals that the majority of participating laboratories are proficient in molecular testing of Zika virus.
Copyright © 2017 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Armored RNA; External quality assessment; Molecular diagnosis; Zika virus

Mesh:

Substances:

Year:  2017        PMID: 28111270     DOI: 10.1016/j.cca.2017.01.023

Source DB:  PubMed          Journal:  Clin Chim Acta        ISSN: 0009-8981            Impact factor:   3.786


  2 in total

1.  One-plasmid double-expression His-tag system for rapid production and easy purification of MS2 phage-like particles.

Authors:  Pavel Mikel; Petra Vasickova; Petr Kralik
Journal:  Sci Rep       Date:  2017-12-13       Impact factor: 4.379

2.  Impact of SARS-CoV-2 Variants on the Analytical Sensitivity of rRT-PCR Assays.

Authors:  Yuqing Chen; Yanxi Han; Jing Yang; Yu Ma; Jinming Li; Rui Zhang
Journal:  J Clin Microbiol       Date:  2022-03-28       Impact factor: 11.677

  2 in total

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