Literature DB >> 28111072

Structural Titration of Slo2.2, a Na+-Dependent K+ Channel.

Richard K Hite1, Roderick MacKinnon2.   

Abstract

The stable structural conformations that occur along the complete reaction coordinate for ion channel opening have never been observed. In this study, we describe the equilibrium ensemble of structures of Slo2.2, a neuronal Na+-activated K+ channel, as a function of the Na+ concentration. We find that Slo2.2 exists in multiple closed conformations whose relative occupancies are independent of Na+ concentration. An open conformation emerges from an ensemble of closed conformations in a highly Na+-dependent manner, without evidence of Na+-dependent intermediates. In other words, channel opening is a highly concerted, switch-like process. The midpoint of the structural titration matches that of the functional titration. A maximum open conformation probability approaching 1.0 and maximum functional open probability approaching 0.7 imply that, within the class of open channels, there is a subclass that is not permeable to ions.
Copyright © 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  K(+) channel; Slo2 channel; channel gating mechanism; cryo-electron microscopy; high conductance K(+) channel; ion channel gating; ligand-gated ion channel; molecular structure

Mesh:

Substances:

Year:  2017        PMID: 28111072      PMCID: PMC5382815          DOI: 10.1016/j.cell.2016.12.030

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  52 in total

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2.  High probability opening of NMDA receptor channels by L-glutamate.

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Journal:  Science       Date:  1992-01-24       Impact factor: 47.728

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Authors:  Sarah E Heron; Katherine R Smith; Melanie Bahlo; Lino Nobili; Esther Kahana; Laura Licchetta; Karen L Oliver; Aziz Mazarib; Zaid Afawi; Amos Korczyn; Giuseppe Plazzi; Steven Petrou; Samuel F Berkovic; Ingrid E Scheffer; Leanne M Dibbens
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Authors:  Y Jiang; A Pico; M Cadene; B T Chait; R MacKinnon
Journal:  Neuron       Date:  2001-03       Impact factor: 17.173

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

7.  Coupling between voltage sensor activation, Ca2+ binding and channel opening in large conductance (BK) potassium channels.

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Journal:  J Struct Biol       Date:  2012-09-19       Impact factor: 2.867

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