Literature DB >> 28102667

Two Different Structures of the Oxygen-Evolving Complex in the Same Polypeptide Frameworks of Photosystem II.

Ayako Tanaka1, Yoshimasa Fukushima2, Nobuo Kamiya1,2.   

Abstract

The oxygen-evolving complex (OEC) forms the heart of photosystem II (PSII) in photosynthesis. The crystal structure of PSII from Thermosynechococcus vulcanus has been reported at a resolution of 1.9 Å and at an averaged X-ray dose of 0.43 MGy. The OEC structure is suggested to be partially reduced to Mn(II) by EXAFS and DFT computational studies. Recently, the "radiation-damage-free" structures have been published at 1.95 Å resolution using XFEL, but reports continued to appear that the OEC is reduced to the S0-state of the Kok cycle. To elucidate much more precise structure of the OEC, in this study two structures were determined at extremely low X-ray doses of 0.03 and 0.12 MGy using conventional synchrotron radiation source. The results indicated that the X-ray reduction effects on the OEC were very small in the low dose region below 0.12 MGy, that is, a threshold existed for the OEC structural changes caused by X-ray exposure. The OEC structures of the two identical monomers in the crystal were clearly different under the threshold of the radiation dose, although the surrounding polypeptide frameworks of PSII were the same. The assumption that the OECs in the crystal were in the dark-stable S1-state of the Kok cycle should be re-evaluated.

Entities:  

Year:  2017        PMID: 28102667     DOI: 10.1021/jacs.6b09666

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  19 in total

1.  D1-Asn-298 in photosystem II is involved in a hydrogen-bond network near the redox-active tyrosine YZ for proton exit during water oxidation.

Authors:  Ryo Nagao; Hanayo Ueoka-Nakanishi; Takumi Noguchi
Journal:  J Biol Chem       Date:  2017-10-18       Impact factor: 5.157

2.  Chlorophyll a with a farnesyl tail in thermophilic cyanobacteria.

Authors:  Jessica M Wiwczar; Amy M LaFountain; Jimin Wang; Harry A Frank; Gary W Brudvig
Journal:  Photosynth Res       Date:  2017-07-24       Impact factor: 3.573

3.  Predicting the oxidation states of Mn ions in the oxygen-evolving complex of photosystem II using supervised and unsupervised machine learning.

Authors:  Muhamed Amin
Journal:  Photosynth Res       Date:  2022-07-27       Impact factor: 3.429

4.  Hydroxyectoine protects Mn-depleted photosystem II against photoinhibition acting as a source of electrons.

Authors:  D V Yanykin; M Malferrari; S Rapino; G Venturoli; A Yu Semenov; M D Mamedov
Journal:  Photosynth Res       Date:  2019-01-30       Impact factor: 3.573

5.  The study of conformational changes in photosystem II during a charge separation.

Authors:  Natalia Kulik; Michal Kutý; David Řeha
Journal:  J Mol Model       Date:  2020-03-09       Impact factor: 1.810

6.  Optimizing Crystal Size of Photosystem II by Macroseeding: Toward Neutron Protein Crystallography.

Authors:  Rana Hussein; Mohamed Ibrahim; Ruchira Chatterjee; Leighton Coates; Frank Müh; Vittal K Yachandra; Junko Yano; Jan Kern; Holger Dobbek; Athina Zouni
Journal:  Cryst Growth Des       Date:  2017-11-13       Impact factor: 4.076

7.  Glycerol binding at the narrow channel of photosystem II stabilizes the low-spin S2 state of the oxygen-evolving complex.

Authors:  David A Flesher; Jinchan Liu; Jessica M Wiwczar; Krystle Reiss; Ke R Yang; Jimin Wang; Mikhail Askerka; Christopher J Gisriel; Victor S Batista; Gary W Brudvig
Journal:  Photosynth Res       Date:  2022-03-23       Impact factor: 3.429

8.  Structural insights into the light-driven auto-assembly process of the water-oxidizing Mn4CaO5-cluster in photosystem II.

Authors:  Miao Zhang; Martin Bommer; Ruchira Chatterjee; Rana Hussein; Junko Yano; Holger Dau; Jan Kern; Holger Dobbek; Athina Zouni
Journal:  Elife       Date:  2017-07-18       Impact factor: 8.140

9.  Understanding Two Different Structures in the Dark Stable State of the Oxygen-Evolving Complex of Photosystem II: Applicability of the Jahn-Teller Deformation Formula.

Authors:  Mitsuo Shoji; Hiroshi Isobe; Ayako Tanaka; Yoshimasa Fukushima; Keisuke Kawakami; Yasufumi Umena; Nobuo Kamiya; Takahito Nakajima; Kizashi Yamaguchi
Journal:  ChemPhotoChem       Date:  2017-12-27

10.  Crystallographic Data Support the Carousel Mechanism of Water Supply to the Oxygen-Evolving Complex of Photosystem II.

Authors:  Jimin Wang; Mikhail Askerka; Gary W Brudvig; Victor S Batista
Journal:  ACS Energy Lett       Date:  2017-09-07       Impact factor: 23.101

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