Literature DB >> 28101245

APOBEC3B expression in human leptomeninges and meningiomas.

Mahlon D Johnson1, Jay E Reeder2, Mary O'Connell1.   

Abstract

Nucleic acid-editing enzymes of the apolipoprotein B mRNA-editing enzyme (APOBEC) family have been associated with somatic mutation in cancer. However, the role of APOBEC catalytic subunit 3B (APOBEC3B) editing in the pathogenesis of base substitutions in meningiomas is unknown. In the present study, the expression of APOBEC3B was examined by reverse transcription-quantitative polymerase chain reaction (RT-qPCR) and western blot analyses in five fetal and one adult human leptomeninges and 38 meningiomas. Genomic DNA was sequenced using the Illumina Tru-Seq Cancer Panel. Three meningioma primary cultures were also established and treated with cerebrospinal fluid form patients without neurological disease or platelet-derived growth factor-BB (PDGF-BB), prior to evaluation of APOBEC3B expression. By western blotting, APOBEC3B was revealed to be present in 100% of the fetal leptomeninges, and in 88% of World Health Organization grade I, 100% of grade II and 83% of grade III meningiomas tested, but was not different between grades. RT-qPCR revealed no difference in the mRNA expression of APOBEC3B between grades. Sequencing revealed no elevated levels of the C>T mutations that are characteristic of APOBEC3B editing of genomic DNA. Treatment with cerebrospinal fluid and PDGF-BB had no effect on APOBEC3B protein expression in the leptomeningeal or meningioma cells. These findings suggest that the mutations associated with increased APOBEC3B expression may not be central to the pathogenesis of meningiomas.

Entities:  

Keywords:  APOBEC; arachnoid granulations; leptomeninges; meningioma

Year:  2016        PMID: 28101245      PMCID: PMC5228209          DOI: 10.3892/ol.2016.5377

Source DB:  PubMed          Journal:  Oncol Lett        ISSN: 1792-1074            Impact factor:   2.967


  17 in total

1.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.

Authors:  K J Livak; T D Schmittgen
Journal:  Methods       Date:  2001-12       Impact factor: 3.608

2.  Genomic profiling reveals alternative genetic pathways of meningioma malignant progression dependent on the underlying NF2 status.

Authors:  Stéphane Goutagny; Hong Wei Yang; Jessica Zucman-Rossi; Jennifer Chan; Jonathan M Dreyfuss; Peter J Park; Peter M Black; Marco Giovannini; Rona S Carroll; Michel Kalamarides
Journal:  Clin Cancer Res       Date:  2010-08-03       Impact factor: 12.531

3.  Excessive activity of apolipoprotein B mRNA editing enzyme catalytic polypeptide 2 (APOBEC2) contributes to liver and lung tumorigenesis.

Authors:  Shunsuke Okuyama; Hiroyuki Marusawa; Tomonori Matsumoto; Yoshihide Ueda; Yuko Matsumoto; Yoko Endo; Atsushi Takai; Tsutomu Chiba
Journal:  Int J Cancer       Date:  2011-05-30       Impact factor: 7.396

4.  Cerebrospinal fluid stimulates leptomeningeal and meningioma cell proliferation and activation of STAT3.

Authors:  Mahlon D Johnson; Mary O'Connell; Michael Facik; Paul Maurer; Babak Jahromi; Webster Pilcher
Journal:  J Neurooncol       Date:  2011-10-05       Impact factor: 4.130

5.  APOBEC3B is an enzymatic source of mutation in breast cancer.

Authors:  Michael B Burns; Lela Lackey; Michael A Carpenter; Anurag Rathore; Allison M Land; Brandon Leonard; Eric W Refsland; Delshanee Kotandeniya; Natalia Tretyakova; Jason B Nikas; Douglas Yee; Nuri A Temiz; Duncan E Donohue; Rebecca M McDougle; William L Brown; Emily K Law; Reuben S Harris
Journal:  Nature       Date:  2013-02-06       Impact factor: 49.962

6.  APOBEC3 signature mutations in chronic lymphocytic leukemia.

Authors:  S Rebhandl; M Huemer; F J Gassner; N Zaborsky; D Hebenstreit; K Catakovic; E M Grössinger; R Greil; R Geisberger
Journal:  Leukemia       Date:  2014-05-20       Impact factor: 11.528

7.  AID/APOBEC cytosine deaminase induces genome-wide kataegis.

Authors:  Artem G Lada; Alok Dhar; Robert J Boissy; Masayuki Hirano; Aleksandr A Rubel; Igor B Rogozin; Youri I Pavlov
Journal:  Biol Direct       Date:  2012-12-18       Impact factor: 4.540

8.  APOBEC3B can impair genomic stability by inducing base substitutions in genomic DNA in human cells.

Authors:  Masanobu Shinohara; Katsuhiro Io; Keisuke Shindo; Masashi Matsui; Takashi Sakamoto; Kohei Tada; Masayuki Kobayashi; Norimitsu Kadowaki; Akifumi Takaori-Kondo
Journal:  Sci Rep       Date:  2012-11-13       Impact factor: 4.379

9.  APOBEC3B gene overexpression in non-small-cell lung cancer.

Authors:  Hidefumi Sasaki; Ayumi Suzuki; Tsutomu Tatematsu; Masayuki Shitara; Yu Hikosaka; Katsuhiro Okuda; Satoru Moriyama; Motoki Yano; Yoshitaka Fujii
Journal:  Biomed Rep       Date:  2014-03-18

10.  Patterns and processes of somatic mutations in nine major cancers.

Authors:  Peilin Jia; William Pao; Zhongming Zhao
Journal:  BMC Med Genomics       Date:  2014-02-19       Impact factor: 3.063

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