| Literature DB >> 28101093 |
Evgenii Komyshev1, Mikhail Genaev2, Dmitry Afonnikov3.
Abstract
Grain morphometry in cereals is an important step in selecting new high-yielding plants. Manual assessment of parameters such as the number of grains per ear and grain size is laborious. One solution to this problem is image-based analysis that can be performed using a desktop PC. Furthermore, the effectiveness of analysis performed in the field can be improved through the use of mobile devices. In this paper, we propose a method for the automated evaluation of phenotypic parameters of grains using mobile devices running the Android operational system. The experimental results show that this approach is efficient and sufficiently accurate for the large-scale analysis of phenotypic characteristics in wheat grains. Evaluation of our application under six different lighting conditions and three mobile devices demonstrated that the lighting of the paper has significant influence on the accuracy of our method, unlike the smartphone type.Entities:
Keywords: Android; computer image analysis; mobile devices; phenotyping; wheat grain
Year: 2017 PMID: 28101093 PMCID: PMC5209368 DOI: 10.3389/fpls.2016.01990
Source DB: PubMed Journal: Front Plant Sci ISSN: 1664-462X Impact factor: 5.753
Light conditions for measuring the accuracy of the wheat grain morphometry.
| Number | Lighting facilities | Luminous flux (lux) | Light temperature |
|---|---|---|---|
| L1 | 11-W daylight lamp | 900 lm | 4000K |
| L2 | 11-W daylight lamp, 2 × 5-W daylight lamps | 1700 lm | 4000K |
| L3 | 11-W daylight lamp, 4 × 5-W daylight lamps | 2500 lm | 4000K |
| L4 | 11-W daylight lamp, 4 × 5-W daylight lamps, 35-W halogen lamp | 2690 lm | 4000 and 2700K |
| L5 | Daylight, cloudy day, indoors | (1280 lux) | – |
| L6 | Daylight, sunny day, outdoors | (656000 lux) | – |
Evaluation of the accuracy of wheat grain counting using the SeedCounter mobile application.
| Experiment ID | MAEa (mm) | MAPEa (%) | |
|---|---|---|---|
| Sam_L1 | 1.425 | 0.035 | 0.996 |
| Sam_L2 | 1.375 | 0.036 | 0.994 |
| Sam_L3 | 0.65 | 0.015 | 0.998 |
| Sam_L4 | 0.975 | 0.024 | 0.997 |
| Sam_L5 | 1.15 | 0.029 | 0.992 |
| Sam_L6 | 0.55 | 0.017 | 0.998 |
| Sony_L1 | 1 | 0.024 | 0.995 |
| Sony_L2 | 0.8 | 0.019 | 0.995 |
| Sony_L3 | 0.675 | 0.017 | 0.996 |
| Sony_L4 | 0.775 | 0.020 | 0.997 |
| Sony_L5 | 0.75 | 0.018 | 0.996 |
| Sony_L6 | 0.775 | 0.018 | 0.996 |
| DNS_L1 | 1.2 | 0.031 | 0.997 |
| DNS_L2 | 0.5 | 0.012 | 0.997 |
| DNS_L3 | 0.125 | 0.003 | 0.999 |
| DNS_L4 | 0.725 | 0.017 | 0.998 |
| DNS_L5 | 1.175 | 0.030 | 0.996 |
| DNS_L6 | 0.775 | 0.020 | 0.997 |
The accuracy of estimates of the length and width of wheat grains by SeedCounter mobile application and SmartGrain.
| Experiment ID | MAEa (mm) | MAPEa (%) | ||
|---|---|---|---|---|
| Sam_L1 | 0.284 | 7.453 | 0.936 | 0.816 |
| Sam_L2 | 0.296 | 7.576 | 0.928 | 0.824 |
| Sam_L3 | 0.283 | 7.339 | 0.932 | 0.822 |
| Sam_L4 | 0.327 | 8.306 | 0.923 | 0.811 |
| Sam_L5 | 0.398 | 9.081 | 0.797 | 0.770 |
| Sam_L6 | 0.349 | 8.437 | 0.875 | 0.769 |
| Sony_L1 | 0.313 | 8.277 | 0.933 | 0.765 |
| Sony_L2 | 0.310 | 8.121 | 0.931 | 0.767 |
| Sony_L3 | 0.298 | 7.787 | 0.937 | 0.777 |
| Sony_L4 | 0.327 | 8.418 | 0.920 | 0.755 |
| Sony_L5 | 0.301 | 7.727 | 0.913 | 0.749 |
| Sony_L6 | 0.338 | 8.546 | 0.899 | 0.730 |
| DNS_L1 | 0.295 | 7.852 | 0.943 | 0.774 |
| DNS_L2 | 0.296 | 7.688 | 0.935 | 0.777 |
| DNS_L3 | 0.287 | 7.730 | 0.950 | 0.779 |
| DNS_L4 | 0.311 | 8.229 | 0.940 | 0.780 |
| DNS_L5 | 0.351 | 8.798 | 0.890 | 0.672 |
| DNS_L6 | 0.346 | 8.264 | 0.890 | 0.787 |
| SmartGrain | 0.305 | 6.973 | 0.948 | 0.886 |
Significance of the influence of the mobile device type and lighting on errors in estimating grain number and dimensions.
| Error type | Lighting conditions | Device type |
|---|---|---|
| Grain counting, MAE | 0.365 | |
| Grain counting, MAPE | 0.306 | |
| Grain dimensions, MAE | 0.771 | |
| Grain dimensions, MAPE | 0.094 | 0.890 |