| Literature DB >> 28100079 |
Zeynep Alkan Alkaya1, Halil İlkimen2, Cengiz Yenikaya2, Yasemin Kaygısız3, Metin Bülbül3, Tuncay Tunç4, Musa Sarı5.
Abstract
A novel proton transfer compound (SMHABT)+(HDPC)- (1) obtained from 2-amino-6-sulfamoylbenzothiazole (SMABT) and 2,6-pyridinedicarboxylic acid (H2DPC) and its Fe(III), Co(II), Ni(II) complexes (2-4), and Fe(II) complex of SMABT (5) have been prepared and characterized by spectroscopic techniques. Additionally, single crystal X-ray diffraction techniques were applied to complexes (2-4). All complexes (2-4) have distorted octahedral conformations and the structure of 5 might be proposed as octahedral according to spectral and analytical results. All compounds, including acetazolamide (AAZ) as the control compound, were also evaluated for their in vitro inhibition effects on human hCA I and hCA II for their hydratase and esterase activities. The synthesized compounds have remarkable inhibitory activities on hCA I and hCA II. Especially, the inhibition potentials of the salt and the metal complexes (1-5) are comparable with AAZ. Inhibition data have been analyzed by using a one-way analysis of variance for multiple comparisons (p < .0001).Entities:
Keywords: 2,6-pyridinedicarboxylic acid; 2-amino-6-sulfamoylbenzothiazole; Carbonic anhydrase; metal complex; proton transfer; statistical analyses
Mesh:
Substances:
Year: 2017 PMID: 28100079 PMCID: PMC6009966 DOI: 10.1080/14756366.2016.1247058
Source DB: PubMed Journal: J Enzyme Inhib Med Chem ISSN: 1475-6366 Impact factor: 5.051
Figure 1.Syntheses of all compounds (a for SMABT and b for 1 and c for 2–4 and d for 5).
Crystal data and structure refinement details for compounds 2–4.
| Empirical formula | C21H22N5O14S2Fe | C28H32N8O17S4Co | C28H32N8O17S4Ni |
| Formula weight | 688.41 | 939.79 | 939.55 |
| T[K] | 296(2) | 296(2) | 296(2) |
| Wavelength (Å) | 0.71073 | 0.71073 | 0.71073 |
| Crystal system, space group | Monoclinic, P21/c | Triclinic, P | Triclinic, P |
| Unit cell dimensions (Å, °) | |||
| a | 13.287(3) | 9.2195(3) | 9.118(4) |
| b | 28.417(6) | 14.4582(4) | 14.428(5) |
| c | 7.5289(15) | 14.6132(4) | 14.614(5) |
| α | 98.6100(10) | 98.902(19) | |
| β | 102.199(4) | 106.4460(10) | 106.27(2) |
| γ | 91.2240(10) | 91.19(2) | |
| V (Å3) | 2778.6(10) | 1842.97(9) | 1819.1(11) |
| Z | 4 | 2 | 2 |
| Absorbtion coefficient (mm−1) | 0.772 | 0.780 | 0.852 |
| Dcalc (mg/m3) | 1.646 | 1.694 | 1.715 |
| F(000) | 1412 | 966 | 968 |
| Crystal dimensions (mm) | 0.32 × 0.11 × 0.064 | 0.70 × 0.29 × 0.29 | 0.36 × 0.22 × 0.18 |
| θ range for data collection (°) | 1.43–28.83 | 1.43–28.56 | 1.43–28.46 |
| Index ranges | −18≤ h ≤15 | −12≤ h ≤12 | −12≤ h ≤12 |
| Reflections collected | 7755 | 40682 | 36415 |
| Independent reflections | 7265 | 9410 | 9189 |
| Data/parameters | 5418/428 | 7932/579 | 6014/579 |
| Max. and min. transmission | 0.955, 0.903 | 0.798, 0.762 | 0.858, 0.799 |
| Final R indices [I ≥ 2σ(I)] | R1 = 0.0583 | R1 = 0.0374 | R1 = 0.0606 |
| R indices (all data) | R1 = 0.1251 | R1 = 0.0448 | R1 = 0.1022 |
| Goodness-of-fit on F2 | 1.203 | 1.077 | 0.997 |
| Largest difference in peak and hole (e Å−3) | 0.713, −0.544 | 0.539, −0.402 | 0.633, −0.568 |
Selected bond distances [Å] and angles [°] of compounds 2–4.
| Compound | |||||
| Fe1-N1 | 2.086(5) | Fe1-O1 | 2.034(5) | Fe1-O5 | 2.023(4) |
| Fe1-N2 | 2.068(5) | Fe1-O2 | 2.059(4) | Fe1-O6 | 2.004(5) |
| O1-Fe1-O2 | 150.62(18) | O1-Fe1-N2 | 115.50(19) | O2-Fe1-N1 | 74.96(17) |
| O1-Fe1-O5 | 90.02(19) | O5-Fe1-O2 | 94.58(19) | O2-Fe1-N2 | 93.71(17) |
| O1-Fe1-O6 | 95.6(2) | O6-Fe1-O2 | 94.14(19) | O5-Fe1-N1 | 103.62(18) |
| N1-Fe1-N2 | 168.6(2) | O1-Fe1-N1 | 75.76(18) | O5-Fe1-N2 | 75.68(18) |
| Compound | |||||
| Co1-N1 | 2.0239(14) | Co1-O1 | 2.1992(15) | Co1-O5 | 2.1251(14) |
| Co1-N2 | 2.0277(14) | Co1-O2 | 2.1148(14) | Co1-O6 | 2.1809(14) |
| N1-Co1-N2 | 178.57(6) | N2-Co1-O1 | 103.82(5) | O1-Co1-O5 | 92.53(6) |
| N1-Co1-O1 | 74.81(5) | N2-Co1-O2 | 104.12(6) | O1-Co1-O6 | 92.11(6) |
| N1-Co1-O2 | 77.21(6) | N2-Co1-O5 | 76.92(6) | O2-Co1-O5 | 98.43(6) |
| N1-Co1-O5 | 103.47(6) | N2-Co1-O6 | 75.10(5) | O2-Co1-O6 | 90.37(6) |
| N1-Co1-O6 | 104.45(5) | O1-Co1-O2 | 151.64(5) | O5-Co1-O6 | 151.94(5) |
| Compound | |||||
| Ni1-N1 | 1.973(3) | Ni1-O1 | 2.151(3) | Ni1-O5 | 2.094(3) |
| Ni1-N2 | 1.970(3) | Ni1-O2 | 2.089(3) | Ni1-O6 | 2.161(3) |
| N2-Ni1-N1 | 178.67(12) | O2-Ni1-O5 | 95.30(11) | N2-Ni1-O6 | 76.67(11) |
| N2-Ni1-O2 | 101.98(11) | N2-Ni1-O1 | 103.13(11) | N1-Ni1-O6 | 102.49(11) |
| N1-Ni1-O2 | 79.04(11) | N1-Ni1-O1 | 75.82(11) | O2-Ni1-O6 | 91.95(11) |
| N2-Ni1-O5 | 78.59(11) | O2-Ni1-O1 | 154.83(10) | O5-Ni1-O6 | 155.16(10) |
| N1-Ni1-O5 | 102.20(11) | O5-Ni1-O1 | 91.26(11) | O1-Ni1-O6 | 92.19(11) |
Intermolecular in the complexes, (2–4) hydrogen bonds play important roles in stabilizing the crystal structures. The ranges of the D-H…A angles and those of the H…A and D…A distances indicate the presence of strong and weak hydrogen bondings in the structures 2–4 (Table 3).
Hydrogen bonds for compounds 2–4 (Å, °).
| D-H···A | d(D-H) | d(H···A) | d(D···A) | <D-H···A |
|---|---|---|---|---|
| N3-H3B-O4W | 0.86 | 2.08 | 2.899(12) | 158.1 |
| O1W-H14-O1 | 1.00(16) | 2.17(16) | 3.129(8) | 161(12) |
| O1W-H14-O4 | 1.00(16) | 2.28(15) | 3.093(9) | 138(12) |
| O3W-H32-O2 | 0.72(9) | 2.21(10) | 2.919(9) | 166(10) |
| N4-H4’-O6 | 0.86 | 1.86 | 2.667(2) | 155.1 |
| O2w-H2A-O4 | 0.77(4) | 2.60(4) | 3.260(4) | 146(3) |
| N3-H31-O2W | 0.86 | 2.03 | 2.830(5) | 155.4 |
| N3-H32-O1W | 0.86 | 2.02 | 2.811(6) | 152.0 |
| N4-H4-O6 | 0.86 | 1.89 | 2.627(4) | 142.2 |
| O2W-H2B-O7 | 0.831(10) | 2.50(3) | 3.238(6) | 149(5) |
1H-NMR and 13C-NMR chemical shifts (ppm) with coupling constants and assignments for compound 1.
| H3 | – | C2 | 148 ppm |
| H4 | 7.44 (1H, d) [3JH4-H5 = 8.46 Hz] | C4 | 119 ppm |
| H5 | 7.67 (1H, dxd) [3JH5-H4 = 8.46 Hz, 4JH5-H7 = 1.96 Hz] | C5 | 132 ppm |
| H7 | 8.12 (1H, d) [4JH7-H5 = 1.87 Hz] | C6 | 156 ppm |
| H11 | 7.88 (2H, s) | C7 | 124 ppm |
| H12 | 7.20 (2H, s) | C8 | 137 ppm |
| H13 | – | C9 | 140 ppm |
| H15 | 8.25 (2H, dxd) [3JH15-H16=7.67 Hz, 4JH15-H15’= 1.14 Hz] | C14, C14’ | 167 ppm |
| H16 | 8.18 (1H, d + d) [3JH16-H15/15’=7.70 Hz and 3JH16-H15’/15=7.69 Hz] | C15, C15’ | 128 ppm |
| C16 | 118 ppm | ||
| C17, C17’ | 170 ppm | ||
The inhibition data and Ki values of hCA I and hCA II isozymes for hydratase and esterase activity.
| Hydratase IC50 (μM) | Esterase IC50 (μM) | |||||
|---|---|---|---|---|---|---|
| Compound | hCA I | hCA II | hCA I | hCA II | hCA I | hCA II |
| 0.390 ± 0.008 | 0.200 ± 0.005 | 0.420 ± 0.004 | 0.310 ± 0.008 | 0.260 ± 0.003 | 0.140 ± 0.005 | |
| 30.44 ± 0.008 | 5.670 ± 0.003 | 28.14 ± 0.012 | 5.360 ± 0.005 | 26.32 ± 0.009 | 4.140 ± 0.011 | |
| 7.846 ± 0.005 | 4.334 ± 0.021 | 0.499 ± 0.010 | 0.234 ± 0.006 | 0.268 ± 0.007 | 0.114 ± 0.003 | |
| No inhibition | No inhibition | No inhibition | No inhibition | No inhibition | No inhibition | |
| No inhibition | No inhibition | No inhibition | No inhibition | No inhibition | No inhibition | |
| 6.348 ± 0.012 | 3.876 ± 0.014 | 0.567 ± 0.008 | 0.322 ± 0.006 | 0.306 ± 0.004 | 0.162 ± 0.010 | |
| 4.075 ± 0.018 | 1.998 ± 0.009 | 0.258 ± 0.017 | 0.133 ± 0.015 | 0.149 ± 0.017 | 0.085 ± 0.019 | |
| 2.533 ± 0.023 | 1.009 ± 0.013 | 0.409 ± 0.021 | 0.189 ± 0.005 | 0.192 ± 0.019 | 0.101 ± 0.005 | |
| 1.601 ± 0.008 | 0.703 ± 0.014 | 0.066 ± 0.004 | 0.041 ± 0.003 | 0.028 ± 0.002 | 0.013 ± 0.006 | |
| 0.397 ± 0.011 | 0.212 ± 0.006 | 0.136 ± 0.003 | 0.054 ± 0.001 | 0.043 ± 0.012 | 0.021 ± 0.004 | |
| 1.751 ± 0.013 | 0.887 ± 0.011 | 0.149 ± 0.008 | 0.067 ± 0.008 | 0.068 ± 0.014 | 0.035 ± 0.013 | |
AAZ was used as reference compound.
M = Fe(III), Co(II), and Ni(II).
Mean ± standard error, from three different assays.
p < 0.0001 for all analysis.