| Literature DB >> 28099923 |
Xin-Ya Du1, Yuan-Yuan Hu2, Chun Xie1, Chun-Yan Deng3, Cai-Yun Liu2, Zhi-Guo Luo4, Yu-Ming Niu2,5, Ming Shen6,7.
Abstract
Association between let-7-KRAS rs712 polymorphism and cancer risk was inconsistent. We therefore conducted this meta-analysis to clarify the association between let-7-KRAS rs712 polymorphism and cancer risk with STATA 14.0 software. A systemic literature search in online databases (PubMed, Embase, CNKI and Wanfang database) was preformed to obtain relevant articles. A total of 13 case-control studies involving 3,453 patients and 4,470 controls were identified up to May 16, 2015. The pooled results indicated that significantly increased risk were observed in Chinese population in T vs. G (OR = 1.21, 95% CI = 1.03-1.42) and TT vs. GG + GT genetic models (OR = 1.69, 95% CI = 1.17-2.42). Sensitivity analysis was conducted and the result without heterogeneity showed significant associations in all five genetic models. Subgroup analyses of cancer type indicated a similar result in digestive cancer (for T vs. G: OR = 1.41, 95% CI = 1.26-1.57; GT vs. GG: OR = 1.24, 95% CI = 1.07-1.43; TT vs. GG: OR = 2.53, 95% CI = 1.86-3.44; GT + TT vs. GG: OR = 1.36, 95% CI = 1.19-1.56; TT vs. GG + GT: OR = 2.35, 95% CI = 1.73-3.19). In summary, these evidences demonstrate that let-7-KRAS rs712 G > T polymorphism might be associated with digestive system cancer risk in the Chinese population.Entities:
Keywords: KRAS; cancer; let-7; polymorphism
Mesh:
Substances:
Year: 2017 PMID: 28099923 PMCID: PMC5355145 DOI: 10.18632/oncotarget.14672
Source DB: PubMed Journal: Oncotarget ISSN: 1949-2553
Figure 1Flow diagram of the study selection process
Characteristics of case-control studies on Let-7-KRAS rs712 G > T polymorphism and cancer risk included in the meta-analysis
| First author | Year | Genotype method | Control design | Case | Control | Genotype distribution | P for | MAF | Location | NOS | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Case | Control | ||||||||||||||||
| GG | GT | TT | GG | GT | TT | Case | Control | ||||||||||
| Peng | 2010 | PCR-RFLP | HB | 83 | 80 | 49 | 31 | 3 | 51 | 25 | 4 | 0.68 | 0.22 | 0.21 | Lung | 7 | |
| Li | 2013 | PCR-RFLP | HB | 181 | 674 | 105 | 60 | 16 | 442 | 211 | 21 | 0.49 | 0.25 | 0.19 | Gastric | 8 | |
| Yan | 2013 | PCR-RFLP | HB | 153 | 204 | 83 | 56 | 14 | 137 | 61 | 6 | 0.80 | 0.27 | 0.18 | Glioma | 6 | |
| Pan1 | 2014 | PCR-RFLP | HB | 339 | 313 | 188 | 125 | 26 | 203 | 100 | 10 | 0.58 | 0.26 | 0.19 | Colorectal | 8 | |
| Pan2 | 2014 | PCR-RFLP | HB | 188 | 356 | 112 | 64 | 12 | 201 | 138 | 17 | 0.34 | 0.23 | 0.24 | Nasopharyngeal | 7 | |
| Jin | 2014 | PCR-RFLP | HB | 252 | 290 | 154 | 84 | 14 | 183 | 92 | 15 | 0.44 | 0.22 | 0.21 | Thyroid | 7 | |
| Ni | 2015 | PCR-RFLP | HB | 204 | 218 | 112 | 73 | 19 | 145 | 67 | 6 | 0.60 | 0.27 | 0.18 | Cervical | 6 | |
| Liang | 2015 | PCR-RFLP | HB | 415 | 504 | 257 | 144 | 14 | 327 | 163 | 14 | 0.23 | 0.21 | 0.19 | Cervical | 8 | |
| Hu | 2015 | Real-time PCR | HB | 132 | 422 | 22 | 38 | 72 | 12 | 132 | 278 | 0.43 | 0.69 | 0.82 | Lung | 7 | |
| Dai | 2015 | iMLDR | HB | 430 | 430 | 253 | 145 | 32 | 283 | 130 | 17 | 0.67 | 0.24 | 0.19 | Colorectal | 8 | |
| Xiong | 2015 | PCR-RFLP | PB | 262 | 252 | 150 | 92 | 20 | 162 | 79 | 11 | 0.73 | 0.25 | 0.20 | Hepatocellular | 9 | |
| Jiang | 2015 | PCR-RFLP | HB | 586 | 476 | 372 | 176 | 38 | 331 | 133 | 12 | 0.75 | 0.22 | 0.16 | Colorectal | 8 | |
| Huang | 2015 | PCR-RFLP | HB | 228 | 251 | 155 | 65 | 8 | 173 | 71 | 7 | 0.93 | 0.18 | 0.17 | Breast | 7 | |
aHWE in control
Abbreviation: MAF: Minor allele frequency in control group.
HB: Hospital-based; PB: Population-based.
Figure 2Sensitivity analysis through deleting each study to reflect the influence of the individual dataset to the pooled ORs in GT+TT vs. GG model of rs712 G > T polymorphism
Figure 3OR and 95% CIs of the associations between rs712 G > T polymorphism and cancer risk in GT + TT vs. GG model
Figure 4Cumulative meta-analyses according to publication year in GT + TT vs. GG model of rs712 G > T polymorphism
Summary ORs and 95% CI of Let-7-KRAS rs712 G > T polymorphisms and cancer risk
| N* | T vs. G | GT vs. GG | TT vs. GG | GT+TT vs. GG | TT vs. GG+GT | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Unadjusted | OR | 95% CI | P | I2(%) | OR | 95% CI | P | I2(%) | OR | 95% CI | P | I2(%) | OR | 95% CI | P | I2(%) | OR | 95% CI | P | I2(%) | |||||
| Total | 13 | 1.21 | 1.03-1.42 | 0.03 | 75.8 | 1.11 | 0.93-1.31 | 0.24 | 62.0 | 1.61 | 0.98-2.65 | 0.06 | 79.8 | 1.16 | 0.96-1.41 | 0.12 | 72.8 | 1.69 | 1.17-2.42 | 0.01 | 67.4 | ||||
| Sensitive analysis# | 12 | 1.30 | 1.20-1.41 | <0.01 | 33.7 | 1.18 | 1.07-1.31 | <0.01 | 0 | 2.07 | 1.65-2.59 | <0.01 | 24.8 | 1.27 | 1.15-1.41 | <0.01 | 3.2 | 1.96 | 1.57-2.44 | <0.01 | 14.8 | ||||
| Location | |||||||||||||||||||||||||
| Digestive system | 5 | 1.41 | 1.26-1.57 | <0.01 | 0 | 1.24 | 1.07-1.43 | <0.01 | 0 | 2.53 | 1.86-3.44 | <0.01 | 0 | 1.36 | 1.19-1.56 | <0.01 | 0 | 2.35 | 1.73-3.19 | <0.01 | 0 | ||||
| Head and neck | 3 | 1.20 | 0.86-1.67 | 0.29 | 70.6 | 1.09 | 0.79-1.50 | 0.61 | 49.8 | 1.65 | 0.82-3.32 | 0.16 | 52.7 | 1.16 | 0.81-1.67 | 0.42 | 64.2 | 1.58 | 0.86-2.92 | 0.14 | 40.1 | ||||
| Lung | 2 | 0.72 | 0.34-1.56 | 0.41 | 84.1 | 0.46 | 0.06-3.59 | 0.46 | 93. | 0.29 | 0.06-1.52 | 0.14 | 73.9 | 0.43 | 0.05-3.41 | 0.42 | 94.6 | 0.63 | 0.43-0.92 | 0.02 | 0 | ||||
| Cervical | 2 | 1.35 | 0.90-2.02 | 0.14 | 75.5 | 1.21 | 0.96-1.52 | 0.11 | 0 | 2.20 | 0.70-6.94 | 0.18 | 72.0 | 1.32 | 0.93-1.88 | 0.12 | 54.8 | 2.03 | 0.70-5.90 | 0.19 | 68.4 | ||||
| Breast | 1 | 1.06 | 0.76-1.48 | 0.73 | NA | 1.02 | 0.68-1.52 | 0.92 | NA | 1.28 | 0.45-3.60 | 0.65 | NA | 1.04 | 0.71-1.54 | 0.83 | NA | 1.27 | 0.45-3.55 | 0.65 | NA | ||||
| Design | |||||||||||||||||||||||||
| HB | 12 | 1.20 | 1.00-1.43 | 0.05 | 77.6 | 1.09 | 0.91-1.31 | 0.34 | 65.0 | 1.58 | 0.92-2.72 | 0.10 | 81.4 | 1.15 | 0.93-1.41 | 0.20 | 74.9 | 1.68 | 1.14-2.49 | 0.01 | 69.9 | ||||
| PB | 1 | 1.33 | 0.99-1.78 | 0.06 | NA | 1.24 | 0.85-1.80 | 0.26 | NA | 1.94 | 0.90-4.18 | 0.09 | NA | 1.33 | 0.93-1.89 | 0.12 | NA | 1.80 | 0.84-3.83 | 0.13 | NA | ||||
| Genotype method | |||||||||||||||||||||||||
| PCR-RFLP | 11 | 1.29 | 1.18-1.41 | <0.01 | 39.0 | 1.17 | 1.05-1.31 | <0.01 | 0 | 2.06 | 1.62-2.63 | <0.01 | 31.6 | 1.26 | 1.14-1.40 | <0.01 | 10.5 | 1.96 | 1.54-2.49 | <0.01 | 22.5 | ||||
| Others | 2 | 0.83 | 0.31-2.21- | 0.71 | 96.0 | 0.46 | 0.06-3.49 | 0.45 | 95.7 | 0.55 | 0.04-7.79 | 0.66 | 96.7 | 0.46 | 0.05-4.01 | 0.48 | 96.7 | 1.08 | 0.35-3.31 | 0.90 | 89.6 | ||||
| Total | 12 | 1.32 | 1.18-1.79 | <0.01 | 45.6 | 1.20 | 1.08-1.34 | <0.01 | 0 | 1.58 | 0.93-2.70 | 0.09 | 82.0 | 1.12 | 0.73-1.70 | 0.61 | 87.0 | 1.94 | 1.26-3.00 | <0.01 | 16.6 | ||||
| Sensitive analysis# | 10 | 1.32 | 1.18-1.79 | <0.01 | 45.6 | 1.20 | 1.08-1.34 | <0.01 | 0 | 1.99 | 1.49-2.66 | <0.01 | 32.4 | 1.39 | 1.21-1.61 | <0.01 | 21.8 | 1.94 | 1.26-3.00 | <0.01 | 16.6 | ||||
| Location | |||||||||||||||||||||||||
| Digestive system | 5 | 1.41 | 1.27-1.55 | <0.01 | 0 | 1.30 | 1.12-1.51 | <0.01 | 0 | 2.42 | 1.76-3.33 | <0.01 | 0 | 1.44 | 1.16-1.79 | <0.01 | 14.0 | 2.45 | 1.44-4.15 | <0.01 | 0 | ||||
| Head and neck | 3 | 1.20 | 0.86-1.67 | 0.29 | 71.2 | 1.09 | 0.79-1.51 | 0.60 | 50.4 | 1.65 | 0.82-3.33 | 0.16 | 52.7 | 1.73 | 1.12-2.67 | 0.01 | NA | NA | NA | NA | NA | ||||
| Lung | 1 | NA | NA | NA | NA | NA | NA | NA | NA | 0.14 | 0.07-0.29 | <0.01 | NA | 0.15 | 0.07-0.32 | <0.01 | NA | NA | NA | NA | NA | ||||
| Cervical | 2 | 1.69 | 1.22-2.34 | <0.01 | NA | 1.20 | 0.96-1.51 | 0.12 | 0 | 2.19 | 0.69-6.96 | 0.18 | 72.3 | 1.32 | 0.92-1.88 | 0.13 | 55.6 | 1.22 | 0.57-2.60 | <0.01 | NA | ||||
| Breast | 1 | 0.94 | 0.65-1.35 | 0.74 | NA | 0.98 | 0.66-1.46 | 0.92 | NA | 0.78 | 0.28-2.19 | 0.64 | NA | NA | NA | NA | NA | NA | NA | NA | NA | ||||
| Design | |||||||||||||||||||||||||
| HB | 11 | 1.32 | 1.16-1.50 | <0.01 | 51.6 | 1.18 | 1.05-1.31 | <0.01 | 0 | 1.52 | 0.86-2.69 | 0.15 | 83.3 | 1.01 | 0.62-1.65 | 0.97 | 88.9 | 1.85 | 0.85-4.01 | 0.12 | 57.7 | ||||
| PB | 1 | 1.35 | 1.02-1.79 | 0.04 | NA | 1.64 | 1.08-2.50 | 0.02 | NA | 12.56 | 1.05-6.25 | 0.04 | NA | 1.75 | 1.16-2.65 | <0.01 | NA | 2.08 | 0.87-4.96 | 0.10 | NA | ||||
| Genotype method | |||||||||||||||||||||||||
| PCR-RFLP | 10 | 1.31 | 1.14-1.50 | <0.01 | 49.3 | 1.19 | 1.06-1.33 | <0.01 | 3.7 | 2.00 | 1.55-2.59 | <0.01 | 39.1 | 1.39 | 1.21-1.61 | <0.01 | 21.8 | 1.94 | 1.26-3.00 | <0.01 | 16.6 | ||||
| Others | 2 | 1.42 | 1.21-1.66 | <0.01 | NA | 1.31 | 0.93-1.84 | 0.12 | NA | 0.52 | 0.04-6.70 | 0.62 | 96.6 | 0.15 | 0.07-0.32 | <0.01 | NA | NA | NA | NA | NA | ||||
* Numbers of comparisons
a Test for heterogeneity
# Sensitive analysis without the report of Hu et al.
Figure 5Funnel plot analysis to detect publication bias for GT + TT vs. GG model of rs712 G > T polymorphism. Circles represent the weight of the studies
Scale for quality assessment
| Criteria | Score |
|---|---|
| Consecutive/randomly selected form case population with clearly defined sampling frame | 2 |
| Consecutive/randomly selected form case population without clearly defined sampling frame or with extensive | 1 |
| Not described | 0 |
| Population- or Healthy-based | 2 |
| Hospital-bases | 1 |
| Not described | 0 |
| Hardy-Weinberg equilibrium | 2 |
| Hardy-Weinberg disequilibrium | 1 |
| Genotyping done under “blinded” condition | 1 |
| Unblinded done or not mentioned | 0 |
| Assess association between genotypes and cancer with appropriate statistics and adjustment for confounders | 2 |
| Assess association between genotypes and cancer with appropriate statistics and without adjustment for confounders | 1 |
| Inappropriate statistics used | 0 |