Literature DB >> 28096516

Newborn Sequencing in Genomic Medicine and Public Health.

Jonathan S Berg1, Pankaj B Agrawal2,3, Donald B Bailey4, Alan H Beggs3, Steven E Brenner5, Amy M Brower6, Julie A Cakici7, Ozge Ceyhan-Birsoy8, Kee Chan9, Flavia Chen10, Robert J Currier11, Dmitry Dukhovny12, Robert C Green13, Julie Harris-Wai10,14, Ingrid A Holm3, Brenda Iglesias15, Galen Joseph16, Stephen F Kingsmore7, Barbara A Koenig14, Pui-Yan Kwok10,17, John Lantos18, Steven J Leeder18, Megan A Lewis4, Amy L McGuire19, Laura V Milko20, Sean D Mooney21, Richard B Parad22, Stacey Pereira19, Joshua Petrikin18, Bradford C Powell20, Cynthia M Powell23, Jennifer M Puck24, Heidi L Rehm8, Neil Risch10, Myra Roche23, Joseph T Shieh10,25, Narayanan Veeraraghavan7, Michael S Watson6, Laurel Willig18, Timothy W Yu3, Tiina Urv26, Anastasia L Wise15.   

Abstract

The rapid development of genomic sequencing technologies has decreased the cost of genetic analysis to the extent that it seems plausible that genome-scale sequencing could have widespread availability in pediatric care. Genomic sequencing provides a powerful diagnostic modality for patients who manifest symptoms of monogenic disease and an opportunity to detect health conditions before their development. However, many technical, clinical, ethical, and societal challenges should be addressed before such technology is widely deployed in pediatric practice. This article provides an overview of the Newborn Sequencing in Genomic Medicine and Public Health Consortium, which is investigating the application of genome-scale sequencing in newborns for both diagnosis and screening.
Copyright © 2017 by the American Academy of Pediatrics.

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Year:  2017        PMID: 28096516      PMCID: PMC5260149          DOI: 10.1542/peds.2016-2252

Source DB:  PubMed          Journal:  Pediatrics        ISSN: 0031-4005            Impact factor:   7.124


  60 in total

Review 1.  Potential Uses and Inherent Challenges of Using Genome-Scale Sequencing to Augment Current Newborn Screening.

Authors:  Jonathan S Berg; Cynthia M Powell
Journal:  Cold Spring Harb Perspect Med       Date:  2015-10-05       Impact factor: 6.915

2.  State newborn screening in the tandem mass spectrometry era: more tests, more false-positive results.

Authors:  Beth A Tarini; Dimitri A Christakis; H Gilbert Welch
Journal:  Pediatrics       Date:  2006-08       Impact factor: 7.124

Review 3.  Diagnostic clinical genome and exome sequencing.

Authors:  Leslie G Biesecker; Robert C Green
Journal:  N Engl J Med       Date:  2014-06-19       Impact factor: 91.245

4.  Reduced activity of 11β-hydroxylase accounts for elevated 17α-hydroxyprogesterone in preterms.

Authors:  Clemens Kamrath; Michaela F Hartmann; Claudia Boettcher; Stefan A Wudy
Journal:  J Pediatr       Date:  2014-05-23       Impact factor: 4.406

5.  Effectiveness of exome and genome sequencing guided by acuity of illness for diagnosis of neurodevelopmental disorders.

Authors:  Sarah E Soden; Carol J Saunders; Laurel K Willig; Emily G Farrow; Laurie D Smith; Josh E Petrikin; Jean-Baptiste LePichon; Neil A Miller; Isabelle Thiffault; Darrell L Dinwiddie; Greyson Twist; Aaron Noll; Bryce A Heese; Lee Zellmer; Andrea M Atherton; Ahmed T Abdelmoity; Nicole Safina; Sarah S Nyp; Britton Zuccarelli; Ingrid A Larson; Ann Modrcin; Suzanne Herd; Mitchell Creed; Zhaohui Ye; Xuan Yuan; Robert A Brodsky; Stephen F Kingsmore
Journal:  Sci Transl Med       Date:  2014-12-03       Impact factor: 17.956

6.  Rapid whole-genome sequencing for genetic disease diagnosis in neonatal intensive care units.

Authors:  Carol Jean Saunders; Neil Andrew Miller; Sarah Elizabeth Soden; Darrell Lee Dinwiddie; Aaron Noll; Noor Abu Alnadi; Nevene Andraws; Melanie LeAnn Patterson; Lisa Ann Krivohlavek; Joel Fellis; Sean Humphray; Peter Saffrey; Zoya Kingsbury; Jacqueline Claire Weir; Jason Betley; Russell James Grocock; Elliott Harrison Margulies; Emily Gwendolyn Farrow; Michael Artman; Nicole Pauline Safina; Joshua Erin Petrikin; Kevin Peter Hall; Stephen Francis Kingsmore
Journal:  Sci Transl Med       Date:  2012-10-03       Impact factor: 17.956

7.  Impact of inborn errors of metabolism on admission in a neonatal intensive care unit: a 4-year report.

Authors:  Meng Meng; Yu-Ping Zhang
Journal:  J Pediatr Endocrinol Metab       Date:  2013       Impact factor: 1.634

8.  A prospective evaluation of whole-exome sequencing as a first-tier molecular test in infants with suspected monogenic disorders.

Authors:  Zornitza Stark; Tiong Y Tan; Belinda Chong; Gemma R Brett; Patrick Yap; Maie Walsh; Alison Yeung; Heidi Peters; Dylan Mordaunt; Shannon Cowie; David J Amor; Ravi Savarirayan; George McGillivray; Lilian Downie; Paul G Ekert; Christiane Theda; Paul A James; Joy Yaplito-Lee; Monique M Ryan; Richard J Leventer; Emma Creed; Ivan Macciocca; Katrina M Bell; Alicia Oshlack; Simon Sadedin; Peter Georgeson; Charlotte Anderson; Natalie Thorne; Clara Gaff; Susan M White
Journal:  Genet Med       Date:  2016-03-03       Impact factor: 8.822

9.  A 26-hour system of highly sensitive whole genome sequencing for emergency management of genetic diseases.

Authors:  Neil A Miller; Emily G Farrow; Margaret Gibson; Laurel K Willig; Greyson Twist; Byunggil Yoo; Tyler Marrs; Shane Corder; Lisa Krivohlavek; Adam Walter; Josh E Petrikin; Carol J Saunders; Isabelle Thiffault; Sarah E Soden; Laurie D Smith; Darrell L Dinwiddie; Suzanne Herd; Julie A Cakici; Severine Catreux; Mike Ruehle; Stephen F Kingsmore
Journal:  Genome Med       Date:  2015-09-30       Impact factor: 11.117

10.  Postanalytical tools improve performance of newborn screening by tandem mass spectrometry.

Authors:  Patricia L Hall; Gregg Marquardt; David M S McHugh; Robert J Currier; Hao Tang; Stephanie D Stoway; Piero Rinaldo
Journal:  Genet Med       Date:  2014-05-29       Impact factor: 8.822

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  60 in total

1.  RAPIDOMICS: rapid genome-wide sequencing in a neonatal intensive care unit-successes and challenges.

Authors:  Alison M Elliott; Christèle du Souich; Anna Lehman; Ilaria Guella; Daniel M Evans; Tara Candido; Leah Tooman; Linlea Armstrong; Lorne Clarke; William Gibson; Harinder Gill; Pascal M Lavoie; Suzanne Lewis; Margaret L McKinnon; Sarah M Nikkel; Millan Patel; Alfonso Solimano; Anne Synnes; Joseph Ting; Margot van Allen; Jan Christilaw; Matthew J Farrer; Jan M Friedman; Horacio Osiovich
Journal:  Eur J Pediatr       Date:  2019-06-07       Impact factor: 3.183

2.  Integrating Genomics into Healthcare: A Global Responsibility.

Authors:  Zornitza Stark; Lena Dolman; Teri A Manolio; Brad Ozenberger; Sue L Hill; Mark J Caulfied; Yves Levy; David Glazer; Julia Wilson; Mark Lawler; Tiffany Boughtwood; Jeffrey Braithwaite; Peter Goodhand; Ewan Birney; Kathryn N North
Journal:  Am J Hum Genet       Date:  2019-01-03       Impact factor: 11.025

3.  A Randomized, Controlled Trial of the Analytic and Diagnostic Performance of Singleton and Trio, Rapid Genome and Exome Sequencing in Ill Infants.

Authors:  Stephen F Kingsmore; Julie A Cakici; Michelle M Clark; Mary Gaughran; Michele Feddock; Sergey Batalov; Matthew N Bainbridge; Jeanne Carroll; Sara A Caylor; Christina Clarke; Yan Ding; Katarzyna Ellsworth; Lauge Farnaes; Amber Hildreth; Charlotte Hobbs; Kiely James; Cyrielle I Kint; Jerica Lenberg; Shareef Nahas; Lance Prince; Iris Reyes; Lisa Salz; Erica Sanford; Peter Schols; Nathaly Sweeney; Mari Tokita; Narayanan Veeraraghavan; Kelly Watkins; Kristen Wigby; Terence Wong; Shimul Chowdhury; Meredith S Wright; David Dimmock
Journal:  Am J Hum Genet       Date:  2019-09-26       Impact factor: 11.025

4.  Potential Role of Genomic Sequencing in the Early Diagnosis of Treatable Genetic Conditions.

Authors:  Hengameh Zahed; Teresa N Sparks; Ben Li; Adnan Alsadah; Joseph T C Shieh
Journal:  J Pediatr       Date:  2017-10       Impact factor: 4.406

Review 5.  Genetic modifiers of Duchenne and facioscapulohumeral muscular dystrophies.

Authors:  Rylie M Hightower; Matthew S Alexander
Journal:  Muscle Nerve       Date:  2017-09-22       Impact factor: 3.217

Review 6.  Paediatric genomics: diagnosing rare disease in children.

Authors:  Caroline F Wright; David R FitzPatrick; Helen V Firth
Journal:  Nat Rev Genet       Date:  2018-02-05       Impact factor: 53.242

7.  Genomic Sequencing Expansion and Incomplete Penetrance.

Authors:  Joseph T C Shieh
Journal:  Pediatrics       Date:  2019-01       Impact factor: 7.124

8.  Returning a Genomic Result for an Adult-Onset Condition to the Parents of a Newborn: Insights From the BabySeq Project.

Authors:  Ingrid A Holm; Amy McGuire; Stacey Pereira; Heidi Rehm; Robert C Green; Alan H Beggs
Journal:  Pediatrics       Date:  2019-01       Impact factor: 7.124

Review 9.  Challenging the Current Recommendations for Carrier Testing in Children.

Authors:  Grace E VanNoy; Casie A Genetti; Amy L McGuire; Robert C Green; Alan H Beggs; Ingrid A Holm
Journal:  Pediatrics       Date:  2019-01       Impact factor: 7.124

10.  Interpretation of Genomic Sequencing Results in Healthy and Ill Newborns: Results from the BabySeq Project.

Authors:  Ozge Ceyhan-Birsoy; Jaclyn B Murry; Kalotina Machini; Matthew S Lebo; Timothy W Yu; Shawn Fayer; Casie A Genetti; Talia S Schwartz; Pankaj B Agrawal; Richard B Parad; Ingrid A Holm; Amy L McGuire; Robert C Green; Heidi L Rehm; Alan H Beggs
Journal:  Am J Hum Genet       Date:  2019-01-03       Impact factor: 11.025

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