Literature DB >> 28096404

TORC1-dependent sumoylation of Rpc82 promotes RNA polymerase III assembly and activity.

Pierre Chymkowitch1,2,3, Aurélie Nguéa P4,2,3, Håvard Aanes3, Joseph Robertson4,2,3, Arne Klungland3,5, Jorrit M Enserink1,2.   

Abstract

Maintaining cellular homeostasis under changing nutrient conditions is essential for the growth and development of all organisms. The mechanisms that maintain homeostasis upon loss of nutrient supply are not well understood. By mapping the SUMO proteome in Saccharomyces cerevisiae, we discovered a specific set of differentially sumoylated proteins mainly involved in transcription. RNA polymerase III (RNAPIII) components, including Rpc53, Rpc82, and Ret1, are particularly prominent nutrient-dependent SUMO targets. Nitrogen starvation, as well as direct inhibition of the master nutrient response regulator target of rapamycin complex 1 (TORC1), results in rapid desumoylation of these proteins, which is reflected by loss of SUMO at tRNA genes. TORC1-dependent sumoylation of Rpc82 in particular is required for robust tRNA transcription. Mechanistically, sumoylation of Rpc82 is important for assembly of the RNAPIII holoenzyme and recruitment of Rpc82 to tRNA genes. In conclusion, our data show that TORC1-dependent sumoylation of Rpc82 bolsters the transcriptional capacity of RNAPIII under optimal growth conditions.

Entities:  

Keywords:  RNA polymerase III; Sumo; TORC1; tRNA; transcription

Mesh:

Substances:

Year:  2017        PMID: 28096404      PMCID: PMC5293095          DOI: 10.1073/pnas.1615093114

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

1.  Molecular basis of RNA polymerase III transcription repression by Maf1.

Authors:  Alessandro Vannini; Rieke Ringel; Anselm G Kusser; Otto Berninghausen; George A Kassavetis; Patrick Cramer
Journal:  Cell       Date:  2010-10-01       Impact factor: 41.582

2.  Two steps in Maf1-dependent repression of transcription by RNA polymerase III.

Authors:  Neelam Desai; Jaehoon Lee; Rajendra Upadhya; Yaya Chu; Robyn D Moir; Ian M Willis
Journal:  J Biol Chem       Date:  2004-12-08       Impact factor: 5.157

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Authors:  Brian K Kennedy; Dudley W Lamming
Journal:  Cell Metab       Date:  2016-06-14       Impact factor: 27.287

Review 4.  Regulation of pol III transcription by nutrient and stress signaling pathways.

Authors:  Robyn D Moir; Ian M Willis
Journal:  Biochim Biophys Acta       Date:  2012-11-16

5.  Cdc28 kinase activity regulates the basal transcription machinery at a subset of genes.

Authors:  Pierre Chymkowitch; Vegard Eldholm; Susanne Lorenz; Christine Zimmermann; Jessica M Lindvall; Magnar Bjørås; Leonardo A Meza-Zepeda; Jorrit M Enserink
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-11       Impact factor: 11.205

6.  Protein kinase A regulates RNA polymerase III transcription through the nuclear localization of Maf1.

Authors:  Robyn D Moir; JaeHoon Lee; Rebecca A Haeusler; Neelam Desai; David R Engelke; Ian M Willis
Journal:  Proc Natl Acad Sci U S A       Date:  2006-09-27       Impact factor: 11.205

7.  Enrichment map: a network-based method for gene-set enrichment visualization and interpretation.

Authors:  Daniele Merico; Ruth Isserlin; Oliver Stueker; Andrew Emili; Gary D Bader
Journal:  PLoS One       Date:  2010-11-15       Impact factor: 3.240

8.  A yeast Ubc9 mutant protein with temperature-sensitive in vivo function is subject to conditional proteolysis by a ubiquitin- and proteasome-dependent pathway.

Authors:  J Betting; W Seufert
Journal:  J Biol Chem       Date:  1996-10-18       Impact factor: 5.157

9.  GPS-SUMO: a tool for the prediction of sumoylation sites and SUMO-interaction motifs.

Authors:  Qi Zhao; Yubin Xie; Yueyuan Zheng; Shuai Jiang; Wenzhong Liu; Weiping Mu; Zexian Liu; Yong Zhao; Yu Xue; Jian Ren
Journal:  Nucleic Acids Res       Date:  2014-05-31       Impact factor: 16.971

10.  Sumoylation of Rap1 mediates the recruitment of TFIID to promote transcription of ribosomal protein genes.

Authors:  Pierre Chymkowitch; Aurélie P Nguéa; Håvard Aanes; Christian J Koehler; Bernd Thiede; Susanne Lorenz; Leonardo A Meza-Zepeda; Arne Klungland; Jorrit M Enserink
Journal:  Genome Res       Date:  2015-03-23       Impact factor: 9.043

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  20 in total

1.  Anabolic transcription: Secrets of the sumo diet.

Authors:  Jorrit Enserink; Aurélie Nguéa P; Pierre Chymkowitch
Journal:  Cell Cycle       Date:  2017-02-14       Impact factor: 4.534

2.  SUMOylation down-regulates rDNA transcription by repressing expression of upstream-binding factor and proto-oncogene c-Myc.

Authors:  Yu Peng; Zhenxing Wang; Zhiqiang Wang; Fang Yu; Jiwen Li; Jiemin Wong
Journal:  J Biol Chem       Date:  2019-11-06       Impact factor: 5.157

Review 3.  Signaling to and from the RNA Polymerase III Transcription and Processing Machinery.

Authors:  Ian M Willis; Robyn D Moir
Journal:  Annu Rev Biochem       Date:  2018-01-12       Impact factor: 23.643

4.  Microarray screening reveals two non-conventional SUMO-binding modules linked to DNA repair by non-homologous end-joining.

Authors:  Maria Jose Cabello-Lobato; Matthew Jenner; Metztli Cisneros-Aguirre; Kira Brüninghoff; Zac Sandy; Isabelle C da Costa; Thomas A Jowitt; Christian M Loch; Stephen P Jackson; Qian Wu; Henning D Mootz; Jeremy M Stark; Matthew J Cliff; Christine K Schmidt
Journal:  Nucleic Acids Res       Date:  2022-05-06       Impact factor: 19.160

5.  Desumoylation of RNA polymerase III lies at the core of the Sumo stress response in yeast.

Authors:  Aurélie Nguéa P; Joseph Robertson; Maria Carmen Herrera; Pierre Chymkowitch; Jorrit M Enserink
Journal:  J Biol Chem       Date:  2019-11-01       Impact factor: 5.157

6.  Waves of sumoylation support transcription dynamics during adipocyte differentiation.

Authors:  Xu Zhao; Ivo A Hendriks; Stéphanie Le Gras; Tao Ye; Lucía Ramos-Alonso; Aurélie Nguéa P; Guro Flor Lien; Fatemeh Ghasemi; Arne Klungland; Bernard Jost; Jorrit M Enserink; Michael L Nielsen; Pierre Chymkowitch
Journal:  Nucleic Acids Res       Date:  2022-02-22       Impact factor: 16.971

Review 7.  Novel layers of RNA polymerase III control affecting tRNA gene transcription in eukaryotes.

Authors:  Ewa Leśniewska; Magdalena Boguta
Journal:  Open Biol       Date:  2017-02       Impact factor: 6.411

8.  The yeast Ty1 retrotransposon requires components of the nuclear pore complex for transcription and genomic integration.

Authors:  Savrina Manhas; Lina Ma; Vivien Measday
Journal:  Nucleic Acids Res       Date:  2018-04-20       Impact factor: 16.971

9.  The TFIIE-related Rpc82 subunit of RNA polymerase III interacts with the TFIIB-related transcription factor Brf1 and the polymerase cleft for transcription initiation.

Authors:  Seok-Kooi Khoo; Chih-Chien Wu; Yu-Chun Lin; Hung-Ta Chen
Journal:  Nucleic Acids Res       Date:  2018-02-16       Impact factor: 16.971

10.  Defective RNA polymerase III is negatively regulated by the SUMO-Ubiquitin-Cdc48 pathway.

Authors:  Zheng Wang; Catherine Wu; Aaron Aslanian; John R Yates; Tony Hunter
Journal:  Elife       Date:  2018-09-07       Impact factor: 8.140

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