Literature DB >> 28088083

Specificity and stability of transient protein-protein interactions.

Sneha Vishwanath1, Anshul Sukhwal2, Ramanathan Sowdhamini3, Narayanaswamy Srinivasan4.   

Abstract

Remarkable features that are achieved in a protein-protein complex to precise levels are stability and specificity. Deviation from the normal levels of specificity and stability, which is often caused by mutations, could result in disease conditions. Chemical nature, 3-D arrangement and dynamics of interface residues code for both specificity and stability. This article reviews roles of interfacial residues in transient protein-protein complexes. It is proposed that aside from hotspot residues conferring stability to the complex, a small set of 'rigid' residues at the interface that maintain conformation between complexed and uncomplexed forms, play a major role in conferring specificity. Exceptionally, 'super hotspot' residues, which confer both stability and specificity, are attractive sites for interaction with small molecule inhibitors.
Copyright © 2017 Elsevier Ltd. All rights reserved.

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Year:  2017        PMID: 28088083     DOI: 10.1016/j.sbi.2016.12.010

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  6 in total

1.  Mathematical model identifies effective P53 accumulation with target gene binding affinity in DNA damage response for cell fate decision.

Authors:  Tingzhe Sun; Dan Mu; Jun Cui
Journal:  Cell Cycle       Date:  2018-12-10       Impact factor: 4.534

2.  Are transient protein-protein interactions more dispensable?

Authors:  Mohamed Ali Ghadie; Yu Xia
Journal:  PLoS Comput Biol       Date:  2022-04-11       Impact factor: 4.475

3.  Tight Complex Formation of the Fumarate Sensing DcuS-DcuR Two-Component System at the Membrane and Target Promoter Search by Free DcuR Diffusion.

Authors:  Stefaniya Gencheva; Simon Dersch; Kristin Surmann; Mathias Wernet; Luis Antelo; Elke Hammer; Peter L Graumann; Nadja Hellmann; Gottfried Unden
Journal:  mSphere       Date:  2022-07-07       Impact factor: 5.029

4.  Interface residues of transient protein-protein complexes have extensive intra-protein interactions apart from inter-protein interactions.

Authors:  Srinivasan Jayashree; Pavalam Murugavel; Ramanathan Sowdhamini; Narayanaswamy Srinivasan
Journal:  Biol Direct       Date:  2019-01-15       Impact factor: 4.540

5.  Molecular and Structural Basis of Cross-Reactivity in M. tuberculosis Toxin-Antitoxin Systems.

Authors:  Himani Tandon; Akhila Melarkode Vattekatte; Narayanaswamy Srinivasan; Sankaran Sandhya
Journal:  Toxins (Basel)       Date:  2020-07-29       Impact factor: 4.546

Review 6.  Modeling the Dynamics of Protein-Protein Interfaces, How and Why?

Authors:  Ezgi Karaca; Chantal Prévost; Sophie Sacquin-Mora
Journal:  Molecules       Date:  2022-03-11       Impact factor: 4.411

  6 in total

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