Literature DB >> 28083126

Crystal structures of (E)-4-[1-(2-carbamo-thio-yl-hydrazinyl-idene)eth-yl]phenyl acetate and (E)-4-[1-(2-carbamo-thio-ylhydrazinyl-idene)eth-yl]phenyl benzoate.

Vijayan Viswanathan1, Mani Karthik Ananth2, S Narasimhan2, Devadasan Velmurugan1.   

Abstract

In the title compounds, C11H13N3O2S, (I), and C16H15N3O2S, (II), the thio-semicarbazone group adopts an extended conformation. The acetate ester (I) crystallizes with two independent mol-ecules in the asymmetric unit. In the benzoate ester (II), the planes of the two aryl rings are inclined to one another by 46.70 (7)°. In both compounds, there is a short intra-molecular N-H⋯N contact present, forming an S(5) ring motif. In the crystals of both compounds, mol-ecules are linked via pairs of N-H⋯S hydrogen bonds, forming dimers with R22(8) ring motifs. The dimers are linked by N-H⋯S and N-H⋯O hydrogen bonds, forming slabs parallel to (01-1). In (I), there are N-H⋯π and C-H⋯π inter-actions present within the slabs, while in (II), there are only N-H⋯π inter-actions present.

Entities:  

Keywords:  N—H⋯S and N—H⋯O hydrogen bonds; N—H⋯π and C—H⋯π inter­actions; carbamo­thio­ylhydrazono; crystal structure; hydrogen bonding; thio­semicarbazone

Year:  2017        PMID: 28083126      PMCID: PMC5209762          DOI: 10.1107/S2056989016018983

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Chemical context

Thio­semicarbazones are potent inter­mediates for the synthesis of pharmaceutical and bioactive materials and they are used extensively in the field of medicinal chemistry. The biological activity of these ligands is related to their ability to coordinate to metal centres in enzymes (Seena et al., 2006 ▸). These derivatives possess an additional functional group that is not coordinated to their ‘primary’ metal ion, thereby suggesting that the biological activity may also depend on the non-coordinating groups (Venkatesh et al., 2016 ▸). Thio­semicarbazones in their neutral or deprotonated form behave as N,N,S-thio­dentate chelates towards metal ions. They display anti­proliferative activity on different tumors cell lines and have been a common feature of all compounds with carcinogenic potency. A strong correlation has been found between tumor growth rate and the ribonucleoside diphos­phate reductase (RDR) enzyme (Arora et al., 2014 ▸). Thio­semicarbazone derivatives have found applications in drug development for the treatment of central nervous system disorders and bacterial infection as well as being analgesic and anti-allergic agents. They are inhibitors of DNA replication and also of many proteases. This inhibitory activity explains the level of inter­est given to them in the fight against microbial and parasitic diseases (Mani et al., 2015 ▸). Thio­semicarbazones have many biological activities such as anti­viral, anti­bacterial, anti­tumor, anti African trypanosome (Fatondji et al., 2013 ▸), anti­microbial, sodium channel blocker, anti­cancer, anti­tubercular, anti­viral (Venkatesh et al., 2016 ▸), anti­fungal, locomotor activity (Singh et al., 2011 ▸), anti­malarial, anti­cancer and they are used as a cure for leprosy, rheumatism and trypanosomiasis (Parul et al., 2012 ▸). As part of our studies in this area, we now describe the syntheses and structures of the title compounds (I) and (II).

Structural commentary

The mol­ecular structure of compounds (I) and (II) are shown in Figs. 1 ▸ and 2 ▸, respectively. Compound (I) crystallizes with two independent mol­ecules in the asymmetric unit. In both the compounds, there is a short N—H⋯N contact, forming an S(5) ring motif (Figs. 1 ▸ and 2 ▸, and Tables 1 ▸ and 2 ▸). In both compounds, the thio­semicarbazone group adopts an extended conformation, as can be seen from the torsion angle S1—C11—N2—N1 [−173.1 (1)° in mol­ecule A and −174.9 (1)° in mol­ecule B of compound (I)] and S1—C16—N2—N1 [172.2 (1)° in compound (II)]. In compound (I), the acetate group adopts an extended conformation, which is evidenced by the torsion angle C1—C2—O2—C3 [−173.2 (2) and 179.9 (2)° in mol­ecules A and B, respectively]. The bond lengths C11A—S1A [1.692 (2) Å] and C11B—S1B [1.680 (2) Å] in (I) and C16—S1 [1.679 (1) Å] in (II) are comparable with the values reported in the literature (CSD; Groom et al., 2016 ▸). In compound (II), the benzoate and aceto­phenone thio­semicarbozone groups lie in a plane [C6—C7—O2—C8 = 175.9 (1)°]. The carbonyl group is oriented syn-periplanar to C5 [C5—C6—C7—O1 = −15.8 (2) °] and anti-periplanar to C1 [C1—C6—C7—O1 = 160.7 (1) °]. The dihedral angle between the benzene rings in compound (II) is 46.70 (7)°.
Figure 1

The mol­ecular structure of the compound (I), showing the atom labelling and displacement ellipsoids drawn at the 30% probability level. The short intra­molecular N—H⋯N contact is shown as a dashed line (see Table 1 ▸).

Figure 2

The mol­ecular structure of the compound (II), showing the atom labelling and displacement ellipsoids drawn at the 40% probability level. The short intra­molecular N—H⋯N contact is shown as a dashed line (see Table 2 ▸).

Table 1

Hydrogen-bond geometry (Å, °) for (I)

Cg1 and Cg2 are the centroids of the C3A–C8A and C3B–C8B rings, respectively.

D—H⋯A D—HH⋯A DA D—H⋯A
N3A—H3A1⋯N1A 0.862.262.617 (2)105
N3B—H3B1⋯N1B 0.862.282.633 (2)105
N2A—H2A⋯S1B 0.862.633.4724 (15)167
N2B—H2B⋯S1A 0.862.713.4228 (16)141
N3A—H3A1⋯O1B i 0.862.443.164 (2)142
N3B—H3B2⋯S1A ii 0.862.573.4262 (17)176
N3A—H3A2⋯Cg2iii 0.862.623.4763 (19)130
C1B—H1B3⋯Cg1iv 0.962.733.691 (3)154

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

Table 2

Hydrogen-bond geometry (Å, °) for (II)

Cg2 is the centroid of the C8–C13 ring.

D—H⋯A D—HH⋯A DA D—H⋯A
N3—H3A⋯N10.862.242.5953 (18)105
N2—H2A⋯S1i 0.862.683.4697 (12)153
N3—H3A⋯O1ii 0.862.273.0653 (15)153
C15—H15B⋯O1iii 0.962.553.454 (2)156
N3—H3BCg2ii 0.862.473.3385 (15)122

Symmetry codes: (i) ; (ii) ; (iii) .

Supra­molecular features

In the crystal of (I), the two mol­ecules are linked by a pair of N—H⋯S hydrogen bonds forming A–B dimers with an (8) ring motif. The dimers are linked by N—H⋯S and N—H⋯O hydrogen bonds, forming slabs lying parallel to (01), as shown in Table 1 ▸ and Fig. 3 ▸. Within the slabs there are N—H⋯π and C—H⋯π inter­actions present (Table 1 ▸).
Figure 3

A view along the b axis of the crystal packing of compound (I). Hydrogen bonds are shown as dashed lines (see Table 1 ▸) and H atoms not involved in hydrogen bonds have been excluded for clarity.

In the crystal of (II), mol­ecules are linked by pairs of N—H⋯S hydrogen bonds, forming inversion dimers with an (8) ring motif (Table 2 ▸ and Fig. 4 ▸). As in the crystal of compound (I), the dimers are linked by N—H⋯S and N—H⋯O hydrogen bonds, forming slabs lying parallel to plane (01); see Table 2 ▸ and Fig. 4 ▸. Within the slabs, there are only N—H⋯π inter­actions present (Table 2 ▸).
Figure 4

A view along the b axis of the crystal packing of compound (II). Hydrogen bonds are shown as dashed lines (see Table 2 ▸) and H atoms not involved in hydrogen bonds have been excluded for clarity.

Database survey

A search of the Cambridge Structural Database (CSD, Version 5.37, last update May 2016; Groom et al., 2016 ▸) for the substructure 2-(1-phenyl­ethyl­idene)hydrazine-1-carbo­thio­amide yielded 100 hits. One of the compounds, (E)-4-(N-carbamo­thioyl­ethane­hydrazono­yl)phenyl 4-methyl­benzoate (NOVFOV; Mani et al., 2015 ▸) is the 4-methyl­benzoate analogue of compound (II). Like compound (I), it crystallizes with two independent mol­ecules in the asymmetric unit. The two mol­ecules differ essentially in the orientation of the hydrazinecarbo­thio­amide unit with respect to the central benzene ring. This dihedral angle is 5.95 (8)° in the first mol­ecule and 42.56 (9)° in the second. The benzoate groups are relatively planar and are inclined to the central benzene ring by 72.23 (7) and 53.10 (9)°, respectively, in the first and second mol­ecules. Hence, the conformation of the second mol­ecule resembles that of compound (II).

Synthesis and crystallization

Compounds (I): Thio­semicarbazide (0.91g, 0.01 mol) was added to 50 ml of an ethano­lic solution of the 4-acetyl phenyl acetate (0.01 mol) for (I), and to an ethano­lic solution of the 4-acetyl­phenyl benzoate (0.01 mol) for (II), with continuous stirring for 4–5 h. The resulting mixtures were refluxed at 333 K and the purity of the products as well as composition of the reaction mixtures was monitored by TLC using ethyl acetate: hexane (3:7). The reaction mixtures were cooled to room temperature and the separated products were filtered, dried and finally recrystallized from chloro­form, solution, yielding block-like yellow crystals of (I) and pale-yellow crystals of (II).

Refinement

Crystal data, data collection and structure refinement details are summarized in Table 3 ▸. Hydrogen atoms were placed in calculated positions and refined as riding atoms: C—H = 0.93–0.96 Å and N—H = 0.86 Å, with U iso(H) = 1.5U eq(C-meth­yl) and 1.2U eq(C,N) for other H atoms.
Table 3

Experimental details

 (I)(II)
Crystal data
Chemical formulaC11H13N3O2SC16H15N3O2S
M r 251.30313.37
Crystal system, space groupTriclinic, P Triclinic, P
Temperature (K)293293
a, b, c (Å)7.8783 (2), 8.9254 (3), 18.7372 (5)7.8145 (4), 9.7538 (5), 10.9050 (7)
α, β, γ (°)77.243 (2), 82.423 (2), 78.856 (2)78.855 (4), 69.031 (2), 84.200 (3)
V3)1255.30 (6)761.05 (8)
Z 42
Radiation typeMo KαMo Kα
μ (mm−1)0.250.22
Crystal size (mm)0.20 × 0.15 × 0.100.25 × 0.18 × 0.14
 
Data collection
DiffractometerBruker SMART APEXII area-detectorBruker SMART APEXII area-detector
Absorption correctionMulti-scan (SADABS; Bruker, 2008)Multi-scan (SADABS; Bruker, 2008)
T min, T max 0.785, 0.8540.745, 0.865
No. of measured, independent and observed [I > 2σ(I)] reflections18970, 5128, 410411596, 3154, 2857
R int 0.0230.027
(sin θ/λ)max−1)0.6250.628
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.038, 0.109, 1.030.034, 0.099, 1.05
No. of reflections51283154
No. of parameters311201
H-atom treatmentH-atom parameters constrainedH-atom parameters constrained
Δρmax, Δρmin (e Å−3)0.25, −0.310.26, −0.29

Computer programs: APEX2 and SAINT (Bruker, 2008 ▸), SHELXS97 (Sheldrick, 2008 ▸), SHELXL2014 (Sheldrick, 2015 ▸), ORTEP-3 for Windows (Farrugia, 2012 ▸), Mercury (Macrae et al., 2008 ▸) and PLATON (Spek, 2009 ▸).

Crystal structure: contains datablock(s) global, I, II. DOI: 10.1107/S2056989016018983/su5323sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989016018983/su5323Isup2.hkl Structure factors: contains datablock(s) II. DOI: 10.1107/S2056989016018983/su5323IIsup3.hkl CCDC references: 1519492, 1519491 Additional supporting information: crystallographic information; 3D view; checkCIF report
C11H13N3O2SZ = 4
Mr = 251.30F(000) = 528
Triclinic, P1Dx = 1.330 Mg m3
a = 7.8783 (2) ÅMo Kα radiation, λ = 0.71073 Å
b = 8.9254 (3) ÅCell parameters from 5128 reflections
c = 18.7372 (5) Åθ = 1.1–26.4°
α = 77.243 (2)°µ = 0.25 mm1
β = 82.423 (2)°T = 293 K
γ = 78.856 (2)°Block, yellow
V = 1255.30 (6) Å30.20 × 0.15 × 0.10 mm
Bruker SMART APEXII area-detector diffractometer4104 reflections with I > 2σ(I)
ω and φ scansRint = 0.023
Absorption correction: multi-scan (SADABS; Bruker, 2008)θmax = 26.4°, θmin = 1.1°
Tmin = 0.785, Tmax = 0.854h = −9→9
18970 measured reflectionsk = −11→11
5128 independent reflectionsl = −23→23
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.038Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.109H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0498P)2 + 0.3822P] where P = (Fo2 + 2Fc2)/3
5128 reflections(Δ/σ)max = 0.001
311 parametersΔρmax = 0.25 e Å3
0 restraintsΔρmin = −0.31 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/Ueq
C10B0.2271 (3)0.1728 (3)0.52308 (11)0.0616 (5)
H10A0.13350.24490.50010.092*
H10B0.22630.18580.57260.092*
H10C0.21290.06810.52350.092*
C1A0.0183 (3)0.8835 (3)1.22191 (11)0.0706 (6)
H1A10.04360.98071.22790.106*
H1A20.06300.80151.26070.106*
H1A3−0.10510.88991.22360.106*
C1B0.5549 (3)0.0841 (3)0.07427 (10)0.0632 (5)
H1B10.47210.12830.03880.095*
H1B20.5685−0.02750.08350.095*
H1B30.66460.11580.05560.095*
C2A0.1010 (3)0.8500 (2)1.15003 (10)0.0506 (4)
C2B0.4920 (3)0.1395 (2)0.14379 (9)0.0515 (4)
C3A0.0618 (2)0.7263 (2)1.05471 (9)0.0438 (4)
C3B0.5256 (3)0.0862 (2)0.27010 (9)0.0501 (4)
C4A−0.0202 (2)0.7922 (2)0.99205 (10)0.0497 (4)
H4A−0.10860.87810.99160.060*
C4B0.6282 (3)0.1679 (2)0.29458 (10)0.0564 (5)
H4B0.72530.19820.26520.068*
C5A0.0297 (2)0.7298 (2)0.92993 (9)0.0476 (4)
H5A−0.02660.77380.88770.057*
C5B0.5867 (3)0.2050 (2)0.36322 (9)0.0533 (5)
H5B0.65660.26030.38000.064*
C6A0.1629 (2)0.60209 (19)0.92929 (8)0.0396 (4)
C6B0.4412 (2)0.16043 (19)0.40777 (9)0.0438 (4)
C7A0.2445 (2)0.5402 (2)0.99344 (9)0.0459 (4)
H7A0.33510.45590.99420.055*
C7B0.3427 (3)0.0750 (2)0.38147 (10)0.0548 (5)
H7B0.24640.04230.41060.066*
C8A0.1934 (2)0.6015 (2)1.05617 (9)0.0481 (4)
H8A0.24820.55811.09880.058*
C8B0.3850 (3)0.0372 (2)0.31264 (10)0.0588 (5)
H8B0.3182−0.02070.29580.071*
C9A0.2116 (2)0.5324 (2)0.86296 (8)0.0412 (4)
C9B0.3961 (2)0.20310 (19)0.48111 (9)0.0427 (4)
C10A0.3766 (3)0.4199 (3)0.85640 (11)0.0705 (6)
H10D0.46460.47360.82730.106*
H10E0.35810.33950.83320.106*
H10F0.41320.37430.90450.106*
C11A0.0194 (2)0.5408 (2)0.70414 (9)0.0428 (4)
C11B0.6013 (2)0.3524 (2)0.59815 (9)0.0448 (4)
N1A0.10302 (18)0.57512 (17)0.81405 (7)0.0423 (3)
N1B0.50947 (19)0.26330 (17)0.50292 (7)0.0460 (3)
N2A0.14402 (18)0.52010 (17)0.74940 (7)0.0444 (3)
H2A0.24730.47360.73840.053*
N2B0.47614 (19)0.30636 (18)0.57038 (7)0.0483 (4)
H2B0.37560.30370.59450.058*
N3A−0.1399 (2)0.5972 (2)0.72772 (8)0.0602 (4)
H3A1−0.16090.61930.77080.072*
H3A2−0.22290.61200.70010.072*
N3B0.7503 (2)0.3608 (2)0.55723 (9)0.0641 (5)
H3B10.76420.33710.51450.077*
H3B20.83350.38980.57330.077*
O1A0.2381 (2)0.8767 (2)1.12093 (9)0.0800 (5)
O1B0.3862 (2)0.2510 (2)0.15026 (8)0.0863 (5)
O2A−0.00302 (17)0.78178 (16)1.11913 (7)0.0555 (3)
O2B0.57246 (19)0.04701 (15)0.20057 (7)0.0607 (4)
S1A0.07063 (6)0.49355 (7)0.62043 (2)0.05713 (16)
S1B0.56754 (6)0.39051 (7)0.68325 (2)0.05582 (15)
U11U22U33U12U13U23
C10B0.0553 (12)0.0813 (14)0.0553 (11)−0.0165 (11)0.0010 (9)−0.0283 (10)
C1A0.0818 (15)0.0834 (15)0.0541 (11)−0.0020 (12)−0.0163 (11)−0.0344 (11)
C1B0.0750 (14)0.0799 (14)0.0428 (10)−0.0222 (11)0.0034 (9)−0.0265 (9)
C2A0.0566 (12)0.0518 (10)0.0477 (10)−0.0062 (9)−0.0142 (9)−0.0161 (8)
C2B0.0558 (11)0.0610 (11)0.0406 (9)−0.0078 (10)−0.0053 (8)−0.0179 (8)
C3A0.0435 (9)0.0564 (10)0.0378 (8)−0.0175 (8)0.0009 (7)−0.0177 (7)
C3B0.0664 (12)0.0445 (9)0.0384 (9)0.0034 (9)−0.0108 (8)−0.0140 (7)
C4A0.0490 (10)0.0543 (10)0.0488 (10)−0.0039 (8)−0.0074 (8)−0.0192 (8)
C4B0.0699 (13)0.0590 (11)0.0427 (9)−0.0163 (10)0.0035 (9)−0.0158 (8)
C5A0.0514 (10)0.0539 (10)0.0396 (9)−0.0061 (8)−0.0110 (7)−0.0126 (7)
C5B0.0665 (12)0.0565 (10)0.0428 (9)−0.0181 (9)−0.0010 (8)−0.0181 (8)
C6A0.0379 (9)0.0493 (9)0.0352 (8)−0.0144 (7)−0.0021 (6)−0.0106 (7)
C6B0.0530 (10)0.0417 (9)0.0364 (8)−0.0031 (8)−0.0094 (7)−0.0086 (7)
C7A0.0440 (10)0.0544 (10)0.0394 (8)−0.0043 (8)−0.0064 (7)−0.0118 (7)
C7B0.0580 (12)0.0644 (11)0.0464 (10)−0.0153 (9)−0.0054 (8)−0.0157 (8)
C8A0.0500 (10)0.0623 (11)0.0340 (8)−0.0116 (9)−0.0081 (7)−0.0095 (7)
C8B0.0694 (13)0.0628 (12)0.0530 (11)−0.0124 (10)−0.0154 (10)−0.0235 (9)
C9A0.0368 (9)0.0536 (10)0.0352 (8)−0.0112 (7)−0.0013 (7)−0.0113 (7)
C9B0.0452 (9)0.0456 (9)0.0365 (8)−0.0022 (7)−0.0078 (7)−0.0093 (7)
C10A0.0578 (13)0.1042 (17)0.0488 (11)0.0159 (12)−0.0143 (9)−0.0341 (11)
C11A0.0387 (9)0.0554 (10)0.0362 (8)−0.0082 (8)−0.0039 (7)−0.0130 (7)
C11B0.0403 (9)0.0559 (10)0.0388 (8)−0.0021 (8)−0.0052 (7)−0.0153 (7)
N1A0.0410 (8)0.0560 (8)0.0335 (7)−0.0104 (6)−0.0013 (6)−0.0158 (6)
N1B0.0477 (8)0.0579 (9)0.0338 (7)−0.0041 (7)−0.0047 (6)−0.0156 (6)
N2A0.0355 (7)0.0657 (9)0.0349 (7)−0.0049 (7)−0.0024 (6)−0.0202 (6)
N2B0.0397 (8)0.0720 (10)0.0371 (7)−0.0072 (7)−0.0011 (6)−0.0228 (7)
N3A0.0410 (9)0.0971 (13)0.0450 (8)0.0060 (8)−0.0084 (7)−0.0322 (8)
N3B0.0451 (9)0.1090 (14)0.0489 (9)−0.0192 (9)0.0046 (7)−0.0384 (9)
O1A0.0727 (11)0.1024 (12)0.0834 (11)−0.0401 (10)0.0012 (8)−0.0408 (9)
O1B0.1032 (13)0.0907 (11)0.0507 (8)0.0349 (10)−0.0177 (8)−0.0223 (8)
O2A0.0525 (8)0.0791 (9)0.0448 (7)−0.0190 (7)0.0029 (6)−0.0311 (6)
O2B0.0776 (9)0.0599 (8)0.0442 (7)0.0098 (7)−0.0114 (6)−0.0246 (6)
S1A0.0422 (3)0.0971 (4)0.0381 (2)−0.0090 (2)−0.00201 (18)−0.0298 (2)
S1B0.0444 (3)0.0874 (4)0.0418 (2)−0.0056 (2)−0.00359 (19)−0.0310 (2)
C10B—C9B1.494 (3)C6A—C7A1.392 (2)
C10B—H10A0.9600C6A—C9A1.484 (2)
C10B—H10B0.9600C6B—C7B1.387 (2)
C10B—H10C0.9600C6B—C9B1.487 (2)
C1A—C2A1.483 (3)C7A—C8A1.385 (2)
C1A—H1A10.9600C7A—H7A0.9300
C1A—H1A20.9600C7B—C8B1.387 (2)
C1A—H1A30.9600C7B—H7B0.9300
C1B—C2B1.485 (2)C8A—H8A0.9300
C1B—H1B10.9600C8B—H8B0.9300
C1B—H1B20.9600C9A—N1A1.282 (2)
C1B—H1B30.9600C9A—C10A1.490 (3)
C2A—O1A1.186 (2)C9B—N1B1.278 (2)
C2A—O2A1.361 (2)C10A—H10D0.9600
C2B—O1B1.186 (2)C10A—H10E0.9600
C2B—O2B1.343 (2)C10A—H10F0.9600
C3A—C8A1.366 (3)C11A—N3A1.315 (2)
C3A—C4A1.375 (2)C11A—N2A1.341 (2)
C3A—O2A1.4023 (19)C11A—S1A1.6915 (16)
C3B—C8B1.361 (3)C11B—N3B1.320 (2)
C3B—C4B1.367 (3)C11B—N2B1.341 (2)
C3B—O2B1.4074 (19)C11B—S1B1.6799 (16)
C4A—C5A1.379 (2)N1A—N2A1.3825 (17)
C4A—H4A0.9300N1B—N2B1.3792 (18)
C4B—C5B1.381 (2)N2A—H2A0.8600
C4B—H4B0.9300N2B—H2B0.8600
C5A—C6A1.394 (2)N3A—H3A10.8600
C5A—H5A0.9300N3A—H3A20.8600
C5B—C6B1.395 (3)N3B—H3B10.8600
C5B—H5B0.9300N3B—H3B20.8600
C9B—C10B—H10A109.5C5B—C6B—C9B120.40 (15)
C9B—C10B—H10B109.5C8A—C7A—C6A121.27 (17)
H10A—C10B—H10B109.5C8A—C7A—H7A119.4
C9B—C10B—H10C109.5C6A—C7A—H7A119.4
H10A—C10B—H10C109.5C8B—C7B—C6B121.33 (18)
H10B—C10B—H10C109.5C8B—C7B—H7B119.3
C2A—C1A—H1A1109.5C6B—C7B—H7B119.3
C2A—C1A—H1A2109.5C3A—C8A—C7A119.29 (16)
H1A1—C1A—H1A2109.5C3A—C8A—H8A120.4
C2A—C1A—H1A3109.5C7A—C8A—H8A120.4
H1A1—C1A—H1A3109.5C3B—C8B—C7B119.06 (17)
H1A2—C1A—H1A3109.5C3B—C8B—H8B120.5
C2B—C1B—H1B1109.5C7B—C8B—H8B120.5
C2B—C1B—H1B2109.5N1A—C9A—C6A115.51 (15)
H1B1—C1B—H1B2109.5N1A—C9A—C10A124.10 (15)
C2B—C1B—H1B3109.5C6A—C9A—C10A120.39 (14)
H1B1—C1B—H1B3109.5N1B—C9B—C6B115.48 (15)
H1B2—C1B—H1B3109.5N1B—C9B—C10B125.51 (15)
O1A—C2A—O2A122.19 (17)C6B—C9B—C10B119.01 (15)
O1A—C2A—C1A127.08 (18)C9A—C10A—H10D109.5
O2A—C2A—C1A110.72 (17)C9A—C10A—H10E109.5
O1B—C2B—O2B122.74 (16)H10D—C10A—H10E109.5
O1B—C2B—C1B126.04 (18)C9A—C10A—H10F109.5
O2B—C2B—C1B111.22 (17)H10D—C10A—H10F109.5
C8A—C3A—C4A121.15 (15)H10E—C10A—H10F109.5
C8A—C3A—O2A120.42 (15)N3A—C11A—N2A117.60 (14)
C4A—C3A—O2A118.20 (16)N3A—C11A—S1A122.72 (13)
C8B—C3B—C4B121.45 (16)N2A—C11A—S1A119.68 (12)
C8B—C3B—O2B119.99 (17)N3B—C11B—N2B117.47 (15)
C4B—C3B—O2B118.50 (17)N3B—C11B—S1B122.55 (13)
C3A—C4A—C5A119.40 (17)N2B—C11B—S1B119.94 (13)
C3A—C4A—H4A120.3C9A—N1A—N2A118.53 (14)
C5A—C4A—H4A120.3C9B—N1B—N2B118.72 (14)
C3B—C4B—C5B119.52 (18)C11A—N2A—N1A118.60 (13)
C3B—C4B—H4B120.2C11A—N2A—H2A120.7
C5B—C4B—H4B120.2N1A—N2A—H2A120.7
C4A—C5A—C6A121.19 (16)C11B—N2B—N1B119.63 (14)
C4A—C5A—H5A119.4C11B—N2B—H2B120.2
C6A—C5A—H5A119.4N1B—N2B—H2B120.2
C4B—C5B—C6B120.83 (17)C11A—N3A—H3A1120.0
C4B—C5B—H5B119.6C11A—N3A—H3A2120.0
C6B—C5B—H5B119.6H3A1—N3A—H3A2120.0
C7A—C6A—C5A117.68 (15)C11B—N3B—H3B1120.0
C7A—C6A—C9A121.51 (15)C11B—N3B—H3B2120.0
C5A—C6A—C9A120.79 (14)H3B1—N3B—H3B2120.0
C7B—C6B—C5B117.77 (16)C2A—O2A—C3A118.74 (14)
C7B—C6B—C9B121.82 (16)C2B—O2B—C3B117.30 (14)
C8A—C3A—C4A—C5A0.9 (3)C5A—C6A—C9A—C10A166.64 (18)
O2A—C3A—C4A—C5A−173.63 (15)C7B—C6B—C9B—N1B170.96 (17)
C8B—C3B—C4B—C5B−1.6 (3)C5B—C6B—C9B—N1B−8.5 (2)
O2B—C3B—C4B—C5B−178.73 (17)C7B—C6B—C9B—C10B−8.7 (3)
C3A—C4A—C5A—C6A−0.6 (3)C5B—C6B—C9B—C10B171.80 (17)
C3B—C4B—C5B—C6B−0.1 (3)C6A—C9A—N1A—N2A177.13 (13)
C4A—C5A—C6A—C7A−0.3 (3)C10A—C9A—N1A—N2A−3.3 (3)
C4A—C5A—C6A—C9A177.89 (16)C6B—C9B—N1B—N2B179.76 (14)
C4B—C5B—C6B—C7B1.4 (3)C10B—C9B—N1B—N2B−0.6 (3)
C4B—C5B—C6B—C9B−179.04 (17)N3A—C11A—N2A—N1A−7.3 (2)
C5A—C6A—C7A—C8A1.0 (2)S1A—C11A—N2A—N1A173.06 (12)
C9A—C6A—C7A—C8A−177.17 (15)C9A—N1A—N2A—C11A168.09 (16)
C5B—C6B—C7B—C8B−1.2 (3)N3B—C11B—N2B—N1B3.0 (3)
C9B—C6B—C7B—C8B179.30 (17)S1B—C11B—N2B—N1B−174.85 (12)
C4A—C3A—C8A—C7A−0.2 (3)C9B—N1B—N2B—C11B172.12 (16)
O2A—C3A—C8A—C7A174.20 (15)O1A—C2A—O2A—C3A7.0 (3)
C6A—C7A—C8A—C3A−0.8 (3)C1A—C2A—O2A—C3A−173.17 (16)
C4B—C3B—C8B—C7B1.8 (3)C8A—C3A—O2A—C2A67.9 (2)
O2B—C3B—C8B—C7B178.94 (17)C4A—C3A—O2A—C2A−117.52 (19)
C6B—C7B—C8B—C3B−0.4 (3)O1B—C2B—O2B—C3B0.6 (3)
C7A—C6A—C9A—N1A164.41 (16)C1B—C2B—O2B—C3B179.85 (16)
C5A—C6A—C9A—N1A−13.8 (2)C8B—C3B—O2B—C2B84.9 (2)
C7A—C6A—C9A—C10A−15.2 (3)C4B—C3B—O2B—C2B−97.9 (2)
D—H···AD—HH···AD···AD—H···A
N3A—H3A1···N1A0.862.262.617 (2)105
N3B—H3B1···N1B0.862.282.633 (2)105
N2A—H2A···S1B0.862.633.4724 (15)167
N2B—H2B···S1A0.862.713.4228 (16)141
N3A—H3A1···O1Bi0.862.443.164 (2)142
N3B—H3B2···S1Aii0.862.573.4262 (17)176
N3A—H3A2···Cg2iii0.862.623.4763 (19)130
C1B—H1B3···Cg1iv0.962.733.691 (3)154
C16H15N3O2SZ = 2
Mr = 313.37F(000) = 328
Triclinic, P1Dx = 1.367 Mg m3
a = 7.8145 (4) ÅMo Kα radiation, λ = 0.71073 Å
b = 9.7538 (5) ÅCell parameters from 3154 reflections
c = 10.9050 (7) Åθ = 2.0–26.5°
α = 78.855 (4)°µ = 0.22 mm1
β = 69.031 (2)°T = 293 K
γ = 84.200 (3)°Block, pale-yellow
V = 761.05 (8) Å30.25 × 0.18 × 0.14 mm
Bruker SMART APEXII area-detector diffractometer2857 reflections with I > 2σ(I)
ω and φ scansRint = 0.027
Absorption correction: multi-scan (SADABS; Bruker, 2008)θmax = 26.5°, θmin = 2.0°
Tmin = 0.745, Tmax = 0.865h = −8→9
11596 measured reflectionsk = −12→12
3154 independent reflectionsl = −13→13
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.034w = 1/[σ2(Fo2) + (0.0512P)2 + 0.1914P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.099(Δ/σ)max = 0.001
S = 1.05Δρmax = 0.26 e Å3
3154 reflectionsΔρmin = −0.29 e Å3
201 parametersExtinction correction: SHELXL2014 (Sheldrick, 2015), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
0 restraintsExtinction coefficient: 0.080 (6)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/Ueq
C1−0.0574 (2)0.60395 (15)0.12357 (14)0.0461 (3)
H10.05810.61650.12520.055*
C2−0.1286 (2)0.69706 (17)0.03984 (16)0.0562 (4)
H2−0.06160.7736−0.01380.067*
C3−0.2978 (3)0.67730 (18)0.03519 (16)0.0596 (4)
H3−0.34390.7398−0.02230.072*
C4−0.3993 (2)0.56519 (19)0.11541 (17)0.0579 (4)
H4−0.51340.55190.11170.069*
C5−0.3315 (2)0.47264 (16)0.20141 (15)0.0483 (3)
H5−0.40050.39770.25670.058*
C6−0.15975 (18)0.49176 (14)0.20510 (12)0.0384 (3)
C7−0.09783 (18)0.39381 (14)0.30353 (12)0.0392 (3)
C80.15463 (18)0.31751 (15)0.37198 (13)0.0400 (3)
C90.15816 (19)0.17391 (15)0.39018 (14)0.0442 (3)
H90.11590.12860.33950.053*
C100.22566 (19)0.09777 (14)0.48531 (14)0.0412 (3)
H100.22470.00060.50040.049*
C110.29489 (16)0.16457 (13)0.55862 (12)0.0346 (3)
C120.29666 (19)0.31025 (14)0.53336 (14)0.0406 (3)
H120.34660.35650.57900.049*
C130.22498 (19)0.38662 (14)0.44118 (14)0.0433 (3)
H130.22430.48380.42600.052*
C140.36348 (17)0.08555 (13)0.66391 (12)0.0353 (3)
C150.2849 (2)−0.05203 (16)0.73732 (16)0.0549 (4)
H15A0.3642−0.10190.78200.082*
H15B0.2737−0.10560.67550.082*
H15C0.1661−0.03730.80180.082*
C160.70223 (17)0.13075 (13)0.78932 (12)0.0358 (3)
N10.48733 (14)0.14652 (11)0.68311 (10)0.0361 (2)
N20.54777 (15)0.08471 (11)0.78611 (11)0.0374 (2)
H2A0.48830.01880.84640.045*
N30.79854 (16)0.21798 (13)0.68277 (11)0.0467 (3)
H3A0.76110.24230.61620.056*
H3B0.89840.25020.68030.056*
O1−0.19599 (15)0.31803 (12)0.39711 (10)0.0550 (3)
O20.08423 (13)0.40017 (11)0.27880 (9)0.0477 (3)
S10.77088 (5)0.07598 (4)0.92056 (4)0.05405 (15)
U11U22U33U12U13U23
C10.0487 (8)0.0491 (8)0.0399 (7)−0.0026 (6)−0.0165 (6)−0.0032 (6)
C20.0671 (10)0.0487 (8)0.0458 (8)0.0029 (7)−0.0183 (7)0.0033 (6)
C30.0728 (11)0.0613 (10)0.0465 (8)0.0207 (8)−0.0300 (8)−0.0070 (7)
C40.0528 (9)0.0721 (10)0.0583 (9)0.0112 (8)−0.0323 (8)−0.0149 (8)
C50.0451 (8)0.0555 (8)0.0467 (8)−0.0013 (6)−0.0206 (6)−0.0055 (6)
C60.0423 (7)0.0432 (7)0.0315 (6)0.0014 (5)−0.0157 (5)−0.0067 (5)
C70.0409 (7)0.0454 (7)0.0333 (6)−0.0030 (5)−0.0159 (5)−0.0048 (5)
C80.0341 (6)0.0523 (7)0.0320 (6)−0.0008 (5)−0.0134 (5)0.0004 (5)
C90.0457 (7)0.0526 (8)0.0419 (7)0.0009 (6)−0.0224 (6)−0.0131 (6)
C100.0426 (7)0.0409 (7)0.0447 (7)0.0023 (5)−0.0196 (6)−0.0112 (5)
C110.0308 (6)0.0398 (6)0.0328 (6)0.0008 (5)−0.0115 (5)−0.0055 (5)
C120.0425 (7)0.0419 (7)0.0429 (7)−0.0020 (5)−0.0211 (6)−0.0073 (5)
C130.0451 (7)0.0394 (7)0.0473 (7)−0.0026 (5)−0.0214 (6)−0.0006 (5)
C140.0332 (6)0.0384 (6)0.0345 (6)0.0000 (5)−0.0128 (5)−0.0054 (5)
C150.0616 (10)0.0520 (8)0.0568 (9)−0.0181 (7)−0.0328 (8)0.0094 (7)
C160.0333 (6)0.0364 (6)0.0365 (6)−0.0022 (5)−0.0130 (5)−0.0010 (5)
N10.0360 (5)0.0396 (5)0.0339 (5)−0.0005 (4)−0.0162 (4)−0.0013 (4)
N20.0365 (6)0.0404 (6)0.0354 (5)−0.0073 (4)−0.0166 (4)0.0047 (4)
N30.0427 (6)0.0574 (7)0.0394 (6)−0.0168 (5)−0.0187 (5)0.0098 (5)
O10.0480 (6)0.0675 (7)0.0456 (6)−0.0137 (5)−0.0208 (5)0.0146 (5)
O20.0404 (5)0.0622 (6)0.0387 (5)−0.0055 (4)−0.0193 (4)0.0083 (4)
S10.0454 (2)0.0720 (3)0.0464 (2)−0.01842 (18)−0.02749 (17)0.01713 (18)
C1—C21.381 (2)C10—C111.3923 (18)
C1—C61.3853 (19)C10—H100.9300
C1—H10.9300C11—C121.3947 (18)
C2—C31.375 (3)C11—C141.4881 (17)
C2—H20.9300C12—C131.3815 (18)
C3—C41.378 (3)C12—H120.9300
C3—H30.9300C13—H130.9300
C4—C51.381 (2)C14—N11.2820 (16)
C4—H40.9300C14—C151.4894 (18)
C5—C61.389 (2)C15—H15A0.9600
C5—H50.9300C15—H15B0.9600
C6—C71.4767 (17)C15—H15C0.9600
C7—O11.1995 (16)C16—N31.3273 (16)
C7—O21.3555 (16)C16—N21.3437 (16)
C8—C91.375 (2)C16—S11.6785 (13)
C8—C131.376 (2)N1—N21.3816 (14)
C8—O21.4067 (15)N2—H2A0.8600
C9—C101.3858 (19)N3—H3A0.8600
C9—H90.9300N3—H3B0.8600
C2—C1—C6119.40 (14)C10—C11—C12118.52 (12)
C2—C1—H1120.3C10—C11—C14122.07 (11)
C6—C1—H1120.3C12—C11—C14119.40 (11)
C3—C2—C1120.47 (15)C13—C12—C11120.66 (12)
C3—C2—H2119.8C13—C12—H12119.7
C1—C2—H2119.8C11—C12—H12119.7
C2—C3—C4120.27 (14)C8—C13—C12119.37 (13)
C2—C3—H3119.9C8—C13—H13120.3
C4—C3—H3119.9C12—C13—H13120.3
C3—C4—C5119.92 (16)N1—C14—C11114.67 (11)
C3—C4—H4120.0N1—C14—C15126.07 (12)
C5—C4—H4120.0C11—C14—C15119.26 (11)
C4—C5—C6119.80 (14)C14—C15—H15A109.5
C4—C5—H5120.1C14—C15—H15B109.5
C6—C5—H5120.1H15A—C15—H15B109.5
C1—C6—C5120.12 (13)C14—C15—H15C109.5
C1—C6—C7122.27 (12)H15A—C15—H15C109.5
C5—C6—C7117.51 (12)H15B—C15—H15C109.5
O1—C7—O2122.72 (12)N3—C16—N2116.66 (11)
O1—C7—C6124.71 (12)N3—C16—S1122.30 (10)
O2—C7—C6112.56 (11)N2—C16—S1121.02 (9)
C9—C8—C13121.44 (12)C14—N1—N2118.03 (10)
C9—C8—O2121.45 (12)C16—N2—N1117.98 (10)
C13—C8—O2117.08 (12)C16—N2—H2A121.0
C8—C9—C10118.95 (12)N1—N2—H2A121.0
C8—C9—H9120.5C16—N3—H3A120.0
C10—C9—H9120.5C16—N3—H3B120.0
C9—C10—C11120.96 (12)H3A—N3—H3B120.0
C9—C10—H10119.5C7—O2—C8116.96 (10)
C11—C10—H10119.5
C6—C1—C2—C3−1.3 (2)C14—C11—C12—C13−176.57 (12)
C1—C2—C3—C40.8 (3)C9—C8—C13—C12−1.6 (2)
C2—C3—C4—C50.4 (3)O2—C8—C13—C12−179.67 (12)
C3—C4—C5—C6−1.0 (2)C11—C12—C13—C8−1.3 (2)
C2—C1—C6—C50.7 (2)C10—C11—C14—N1152.10 (12)
C2—C1—C6—C7−175.72 (13)C12—C11—C14—N1−28.98 (17)
C4—C5—C6—C10.5 (2)C10—C11—C14—C15−28.60 (19)
C4—C5—C6—C7177.06 (13)C12—C11—C14—C15150.32 (14)
C1—C6—C7—O1160.66 (14)C11—C14—N1—N2175.16 (10)
C5—C6—C7—O1−15.8 (2)C15—C14—N1—N2−4.1 (2)
C1—C6—C7—O2−18.01 (18)N3—C16—N2—N1−9.43 (18)
C5—C6—C7—O2165.53 (12)S1—C16—N2—N1172.24 (9)
C13—C8—C9—C103.3 (2)C14—N1—N2—C16166.17 (12)
O2—C8—C9—C10−178.70 (12)O1—C7—O2—C8−2.8 (2)
C8—C9—C10—C11−2.2 (2)C6—C7—O2—C8175.91 (11)
C9—C10—C11—C12−0.6 (2)C9—C8—O2—C766.31 (17)
C9—C10—C11—C14178.29 (12)C13—C8—O2—C7−115.64 (14)
C10—C11—C12—C132.4 (2)
D—H···AD—HH···AD···AD—H···A
N3—H3A···N10.862.242.5953 (18)105
N2—H2A···S1i0.862.683.4697 (12)153
N3—H3A···O1ii0.862.273.0653 (15)153
C15—H15B···O1iii0.962.553.454 (2)156
N3—H3B···Cg2ii0.862.473.3385 (15)122
  5 in total

1.  2-Hydroxyacetophenone 4-phenylthiosemicarbazone.

Authors:  E B Seena; E Manoj; M R Prathapachandra Kurup
Journal:  Acta Crystallogr C       Date:  2006-07-22       Impact factor: 1.172

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Crystal structure refinement with SHELXL.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr C Struct Chem       Date:  2015-01-01       Impact factor: 1.172

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20

5.  The Cambridge Structural Database.

Authors:  Colin R Groom; Ian J Bruno; Matthew P Lightfoot; Suzanna C Ward
Journal:  Acta Crystallogr B Struct Sci Cryst Eng Mater       Date:  2016-04-01
  5 in total

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