Literature DB >> 28078191

Comparison of single nucleotide polymorphisms [SNP] at TNF-α promoter region with TNF receptor 2 (TNFR2) in susceptibility to pulmonary tuberculosis; using PCR-RFLP technique.

Ehsan Ghamari1, Poopak Farnia2, Shima Saif1, Mehran Marashian1, Jaladein Ghanavi1, Parissa Farnia1, Ali Akbar Velayati1.   

Abstract

Since apoptosis and survival of the immune cells are crucially important in prevention or predisposition of individual from/to infections, especially in intracellular ones, the current study was performed to assess the correlation of host genetic polymorphisms with susceptibility to TB. For this reason, we investigated the difference of the single nucleotide polymorphisms [SNPs] in tumor necrosis factors [TNF-α] genes at (-238, -308, -857 and -863 position) and tumor necrosis factors receptors two [TNFR2] at (T 587 G position) between patients [n=151] and control [n=83]. The genotyping was studied by using PCR-RFLP which had high sensitivity in detecting compared with other techniques. The results showed a strong correlation between two polymorphisms in different loci of TNF-α gene including TNF-α T-857 C and A 238 G. But no association were found in TNFR2 genes with susceptibility to TB. And we found no correlation between TNFR2 and TNF-α gene polymorphisms. Therefore, the TNF-α T 857 C and A 238 G SNPs could be promising marker for identifying risk populations.

Entities:  

Keywords:  Iran; PCR-RFLP; Pulmonary tuberculosis; TNF alpha; TNFR2; susceptibility

Year:  2016        PMID: 28078191      PMCID: PMC5218852     

Source DB:  PubMed          Journal:  Am J Clin Exp Immunol


  27 in total

1.  Role of tumor necrosis factor receptor 2 (TNFR2) in colonic epithelial hyperplasia and chronic intestinal inflammation in mice.

Authors:  Emiko Mizoguchi; Atsushi Mizoguchi; Hidetoshi Takedatsu; Elke Cario; Ype P de Jong; Choon Jin Ooi; Ramnik J Xavier; Cox Terhorst; Daniel K Podolsky; Atul K Bhan
Journal:  Gastroenterology       Date:  2002-01       Impact factor: 22.682

2.  Tumor necrosis factor receptor cross-talk.

Authors:  Petrus J W Naudé; Johan A den Boer; Paul G M Luiten; Ulrich L M Eisel
Journal:  FEBS J       Date:  2011-02-08       Impact factor: 5.542

Review 3.  Tuberculosis.

Authors:  Stephen D Lawn; Alimuddin I Zumla
Journal:  Lancet       Date:  2011-03-21       Impact factor: 79.321

4.  Association of tumor necrosis factor receptor type II polymorphism 196R with Systemic lupus erythematosus in the Japanese: molecular and functional analysis.

Authors:  C Morita; T Horiuchi; H Tsukamoto; N Hatta; Y Kikuchi; Y Arinobu; T Otsuka; T Sawabe; S Harashima; K Nagasawa; Y Niho
Journal:  Arthritis Rheum       Date:  2001-12

5.  Single-nucleotide polymorphisms in tumor necrosis factor receptor genes: definition of novel haplotypes and racial/ethnic differences.

Authors:  S Louis Bridges; Grace Jenq; Molly Moran; Tamara Kuffner; William C Whitworth; Janet McNicholl
Journal:  Arthritis Rheum       Date:  2002-08

Review 6.  Tumour necrosis factor antagonists: structure, function, and tuberculosis risks.

Authors:  Robert S Wallis
Journal:  Lancet Infect Dis       Date:  2008-10       Impact factor: 25.071

7.  Tumor necrosis factor alpha gene polymorphism contributes to pulmonary tuberculosis susceptibility: evidence from a meta-analysis.

Authors:  Yong-Xiang Yi; Jian-Bo Han; Liang Zhao; Yuan Fang; Yu-Feng Zhang; Guang-Yao Zhou
Journal:  Int J Clin Exp Med       Date:  2015-11-15

8.  Genetic contribution of tumor necrosis factor (TNF)-alpha gene promoter (-1031, -863 and -857) and TNF receptor 2 gene polymorphisms in endometriosis susceptibility.

Authors:  Mariko Teramoto; Jo Kitawaki; Hisato Koshiba; Yui Kitaoka; Hiroshi Obayashi; Goji Hasegawa; Naoto Nakamura; Toshikazu Yoshikawa; Masaki Matsushita; Etsuko Maruya; Hiroh Saji; Mitsuhiro Ohta; Hideo Honjo
Journal:  Am J Reprod Immunol       Date:  2004-05       Impact factor: 3.886

9.  Tumor necrosis factor alpha -308G>A, -863C>A, -857C>T gene polymorphisms and tuberculosis susceptibility: a meta-analysis.

Authors:  Hang Zhu; Zhijiao Zhang; Xun Lei; Jing Feng; Fan Zhang; Yang Wang
Journal:  Gene       Date:  2012-08-25       Impact factor: 3.688

10.  Evaluation of TNF-α, IL-10 and IL-6 Cytokine Production and Their Correlation with Genotype Variants amongst Tuberculosis Patients and Their Household Contacts.

Authors:  Lavanya Joshi; Meenakshi Ponnana; Ramya Sivangala; Lakshmi Kiran Chelluri; Prathiba Nallari; Sitaramaraju Penmetsa; Vijayalakshmi Valluri; Sumanlatha Gaddam
Journal:  PLoS One       Date:  2015-09-11       Impact factor: 3.240

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  2 in total

1.  Lack of Association between Cytokine Genetic Polymorphisms in Takayasu's Arteritis in Mexican Patients.

Authors:  María Elena Soto; Claudia Huesca-Gómez; Yazmín Torres-Paz; Giovanny Fuentevilla-Álvarez; Ricardo Gamboa
Journal:  Int J Environ Res Public Health       Date:  2019-12-03       Impact factor: 3.390

2.  Association of Tumor Necrosis Factor-α (TNF-α) -308G>A and -238G>A Polymorphisms with Recurrent Pregnancy Loss Risk: A Meta-Analysis.

Authors:  Fereshteh Aslebahar; Hossein Neamatzadeh; Bahare Meibodi; Mojgan Karimi-Zarchi; Razieh Sadat Tabatabaei; Mahmood Noori-Shadkam; Mahta Mazaheri; Reihaneh Dehghani-Mohammadabadi
Journal:  Int J Fertil Steril       Date:  2018-10-02
  2 in total

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