Literature DB >> 28076816

Mutation G1629E Increases von Willebrand Factor Cleavage via a Cooperative Destabilization Mechanism.

Camilo Aponte-Santamaría1, Svenja Lippok2, Judith J Mittag2, Tobias Obser3, Reinhard Schneppenheim3, Carsten Baldauf4, Frauke Gräter5, Ulrich Budde6, Joachim O Rädler2.   

Abstract

The large multimeric glycoprotein von Willebrand Factor (VWF) plays a pivotal adhesive role during primary hemostasis. VWF is cleaved by the protease ADAMTS13 as a down-regulatory mechanism to prevent excessive VWF-mediated platelet aggregation. For each VWF monomer, the ADAMTS13 cleavage site is located deeply buried inside the VWF A2 domain. External forces in vivo or denaturants in vitro trigger the unfolding of this domain, thereby leaving the cleavage site solvent-exposed and ready for cleavage. Mutations in the VWF A2 domain, facilitating the cleavage process, cause a distinct form of von Willebrand disease (VWD), VWD type 2A. In particular, the VWD type 2A Gly1629Glu mutation drastically accelerates the proteolytic cleavage activity, even in the absence of forces or denaturants. However, the effect of this mutation has not yet been quantified, in terms of kinetics or thermodynamics, nor has the underlying molecular mechanism been revealed. In this study, we addressed these questions by using fluorescence correlation spectroscopy, molecular dynamics simulations, and free energy calculations. The measured enzyme kinetics revealed a 20-fold increase in the cleavage rate for the Gly1629Glu mutant compared with the wild-type VWF. Cleavage was found cooperative with a cooperativity coefficient n = 2.3, suggesting that the mutant VWF gives access to multiple cleavage sites of the VWF multimer at the same time. According to our simulations and free energy calculations, the Gly1629Glu mutation causes structural perturbation in the A2 domain and thereby destabilizes the domain by ∼10 kJ/mol, promoting its unfolding. Taken together, the enhanced proteolytic activity of Gly1629Glu can be readily explained by an increased availability of the ADAMTS13 cleavage site through A2-domain-fold thermodynamic destabilization. Our study puts forward the Gly1629Glu mutant as a very efficient enzyme substrate for ADAMTS13 activity assays.
Copyright © 2017 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2017        PMID: 28076816      PMCID: PMC5232862          DOI: 10.1016/j.bpj.2016.11.3202

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  43 in total

1.  Equilibrium free energies from nonequilibrium measurements using maximum-likelihood methods.

Authors:  Michael R Shirts; Eric Bair; Giles Hooker; Vijay S Pande
Journal:  Phys Rev Lett       Date:  2003-10-02       Impact factor: 9.161

2.  New Soft-Core Potential Function for Molecular Dynamics Based Alchemical Free Energy Calculations.

Authors:  Vytautas Gapsys; Daniel Seeliger; Bert L de Groot
Journal:  J Chem Theory Comput       Date:  2012-06-06       Impact factor: 6.006

3.  Shear-Induced Unfolding and Enzymatic Cleavage of Full-Length VWF Multimers.

Authors:  Svenja Lippok; Matthias Radtke; Tobias Obser; Lars Kleemeier; Reinhard Schneppenheim; Ulrich Budde; Roland R Netz; Joachim O Rädler
Journal:  Biophys J       Date:  2016-02-02       Impact factor: 4.033

4.  Comparison of multiple Amber force fields and development of improved protein backbone parameters.

Authors:  Viktor Hornak; Robert Abel; Asim Okur; Bentley Strockbine; Adrian Roitberg; Carlos Simmerling
Journal:  Proteins       Date:  2006-11-15

5.  GROMACS 4.5: a high-throughput and highly parallel open source molecular simulation toolkit.

Authors:  Sander Pronk; Szilárd Páll; Roland Schulz; Per Larsson; Pär Bjelkmar; Rossen Apostolov; Michael R Shirts; Jeremy C Smith; Peter M Kasson; David van der Spoel; Berk Hess; Erik Lindahl
Journal:  Bioinformatics       Date:  2013-02-13       Impact factor: 6.937

6.  Fluid shear induces conformation change in human blood protein von Willebrand factor in solution.

Authors:  Indrajeet Singh; Efrosyni Themistou; Lionel Porcar; Sriram Neelamegham
Journal:  Biophys J       Date:  2009-03-18       Impact factor: 4.033

7.  Von Willebrand factor-cleaving protease (ADAMTS13) in thrombocytopenic disorders: a severely deficient activity is specific for thrombotic thrombocytopenic purpura.

Authors:  Valentina Bianchi; Rodolfo Robles; Lorenzo Alberio; Miha Furlan; Bernhard Lämmle
Journal:  Blood       Date:  2002-07-15       Impact factor: 22.113

Review 8.  von Willebrand disease: a database of point mutations, insertions, and deletions. For the Consortium on von Willebrand Factor Mutations and Polymorphisms, and the Subcommittee on von Willebrand Factor of the Scientific and Standardization Committee of the International Society on Thrombosis and Haemostasis.

Authors:  D Ginsburg; J E Sadler
Journal:  Thromb Haemost       Date:  1993-02-01       Impact factor: 5.249

9.  Shear-induced unfolding activates von Willebrand factor A2 domain for proteolysis.

Authors:  C Baldauf; R Schneppenheim; W Stacklies; T Obser; A Pieconka; S Schneppenheim; U Budde; J Zhou; F Gräter
Journal:  J Thromb Haemost       Date:  2009-10-08       Impact factor: 5.824

10.  Improved side-chain torsion potentials for the Amber ff99SB protein force field.

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Journal:  Proteins       Date:  2010-06
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  5 in total

1.  Shear-Induced Extensional Response Behaviors of Tethered von Willebrand Factor.

Authors:  Yi Wang; Michael Morabito; X Frank Zhang; Edmund Webb; Alparslan Oztekin; Xuanhong Cheng
Journal:  Biophys J       Date:  2019-04-30       Impact factor: 4.033

2.  Role of calcium in regulating the intra- and extracellular cleavage of von Willebrand factor by the protease ADAMTS13.

Authors:  Shobhit Gogia; Anju Kelkar; Changjie Zhang; Kannayakanahalli M Dayananda; Sriram Neelamegham
Journal:  Blood Adv       Date:  2017-10-20

3.  Internal Tensile Force and A2 Domain Unfolding of von Willebrand Factor Multimers in Shear Flow.

Authors:  Michael Morabito; Chuqiao Dong; Wei Wei; Xuanhong Cheng; Xiaohui F Zhang; Alparslan Oztekin; Edmund Webb
Journal:  Biophys J       Date:  2018-09-13       Impact factor: 4.033

4.  A common mechanism by which type 2A von Willebrand disease mutations enhance ADAMTS13 proteolysis revealed with a von Willebrand factor A2 domain FRET construct.

Authors:  Christopher J Lynch; Adam D Cawte; Carolyn M Millar; David Rueda; David A Lane
Journal:  PLoS One       Date:  2017-11-29       Impact factor: 3.240

5.  Prediction of Sub-Monomer A2 Domain Dynamics of the von Willebrand Factor by Machine Learning Algorithm and Coarse-Grained Molecular Dynamics Simulation.

Authors:  Michael J Morabito; Mustafa Usta; Xuanhong Cheng; Xiaohui F Zhang; Alparslan Oztekin; Edmund B Webb
Journal:  Sci Rep       Date:  2019-06-21       Impact factor: 4.379

  5 in total

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