Literature DB >> 28075225

Plants contain small families of UPF0016 proteins including the PHOTOSYNTHESIS AFFECTED MUTANT71 transporter.

Natalie Hoecker1, Dario Leister1, Anja Schneider1.   

Abstract

PHOTOSYNTHESIS AFFECTED MUTANT71 (PAM71) is an integral thylakoid membrane protein that functions in manganese uptake into the lumen. Manganese is needed in the thylakoid lumen to build up the inorganic Mn4CaO5 cluster, the catalytic center for water oxidation, and is hence indispensable for oxygen evolution. A recent study revealed that PAM71 is well conserved in plants and shares homology to GCR1 DEPENDENT TRANSLATION FACTOR1 (GDT1) and TRANSMEMBRANE PROTEIN 165 (TMEM165) in Saccharomyces cerevisiae and Homo sapiens, respectively. In most eukaryotes only single members of this family, designated "Uncharacterized Protein Family 0016" (UPF0016), are present; however, plant genomes contain genes for several UPF0016 proteins. In Arabidopsis thaliana, this protein family comprises 5 members, which mainly differ in their N-terminal regions. PAM71 and its closest homolog PAM71-HL possess chloroplast transit peptides at their N-terminus. Two of the remaining 3 members are derived from a segmental chromosomal duplication event and lack an N-terminal extension. Thus, plants have evolved UPF0016 members residing in various compartments of the cell, whereas in non-plant eukaryotes just a Golgi localization occurs. The identification of PAM71 as a candidate Mn2+ transporter opens the question on the function of the remaining plant members. Here we resume briefly our current knowledge of UPF0016 members in Arabidopsis in comparison to their yeast and human UPF0016 members.

Entities:  

Keywords:  Arabidopsis; GDT1; PAM71; TMEM165; UPF0016 family; integral membrane protein; manganese transport; thylakoid membrane

Mesh:

Substances:

Year:  2017        PMID: 28075225      PMCID: PMC5351731          DOI: 10.1080/15592324.2016.1278101

Source DB:  PubMed          Journal:  Plant Signal Behav        ISSN: 1559-2316


  30 in total

1.  Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes.

Authors:  A Krogh; B Larsson; G von Heijne; E L Sonnhammer
Journal:  J Mol Biol       Date:  2001-01-19       Impact factor: 5.469

2.  Bone Dysplasia as a Key Feature in Three Patients with a Novel Congenital Disorder of Glycosylation (CDG) Type II Due to a Deep Intronic Splice Mutation in TMEM165.

Authors:  R Zeevaert; F de Zegher; L Sturiale; D Garozzo; M Smet; M Moens; G Matthijs; J Jaeken
Journal:  JIMD Rep       Date:  2012-08-22

3.  Building phylogenetic trees from molecular data with MEGA.

Authors:  Barry G Hall
Journal:  Mol Biol Evol       Date:  2013-03-13       Impact factor: 16.240

4.  A Putative Chloroplast-Localized Ca(2+)/H(+) Antiporter CCHA1 Is Involved in Calcium and pH Homeostasis and Required for PSII Function in Arabidopsis.

Authors:  Chao Wang; Weitao Xu; Honglei Jin; Taijie Zhang; Jianbin Lai; Xuan Zhou; Shengchun Zhang; Shengjie Liu; Xuewu Duan; Hongbin Wang; Changlian Peng; Chengwei Yang
Journal:  Mol Plant       Date:  2016-06-11       Impact factor: 13.164

5.  Predicting subcellular localization of proteins based on their N-terminal amino acid sequence.

Authors:  O Emanuelsson; H Nielsen; S Brunak; G von Heijne
Journal:  J Mol Biol       Date:  2000-07-21       Impact factor: 5.469

6.  Abnormal cartilage development and altered N-glycosylation in Tmem165-deficient zebrafish mirrors the phenotypes associated with TMEM165-CDG.

Authors:  Riet Bammens; Nickita Mehta; Valérie Race; François Foulquier; Jaak Jaeken; Michael Tiemeyer; Richard Steet; Gert Matthijs; Heather Flanagan-Steet
Journal:  Glycobiology       Date:  2015-01-21       Impact factor: 4.313

7.  The Evolutionarily Conserved Protein PHOTOSYNTHESIS AFFECTED MUTANT71 Is Required for Efficient Manganese Uptake at the Thylakoid Membrane in Arabidopsis.

Authors:  Anja Schneider; Iris Steinberger; Andrei Herdean; Chiara Gandini; Marion Eisenhut; Samantha Kurz; Anna Morper; Natalie Hoecker; Thilo Rühle; Mathias Labs; Ulf-Ingo Flügge; Stefan Geimer; Sidsel Birkelund Schmidt; Søren Husted; Andreas P M Weber; Cornelia Spetea; Dario Leister
Journal:  Plant Cell       Date:  2016-03-28       Impact factor: 11.277

8.  The Ca(2+)/H(+) antiporter TMEM165 expression, localization in the developing, lactating and involuting mammary gland parallels the secretory pathway Ca(2+) ATPase (SPCA1).

Authors:  Timothy A Reinhardt; John D Lippolis; Randy E Sacco
Journal:  Biochem Biophys Res Commun       Date:  2014-02-12       Impact factor: 3.575

9.  ARAMEMNON, a novel database for Arabidopsis integral membrane proteins.

Authors:  Rainer Schwacke; Anja Schneider; Eric van der Graaff; Karsten Fischer; Elisabetta Catoni; Marcelo Desimone; Wolf B Frommer; Ulf-Ingo Flügge; Reinhard Kunze
Journal:  Plant Physiol       Date:  2003-01       Impact factor: 8.340

10.  Molecular evolution of a novel family of putative calcium transporters.

Authors:  Didier Demaegd; Anne-Sophie Colinet; Antoine Deschamps; Pierre Morsomme
Journal:  PLoS One       Date:  2014-06-23       Impact factor: 3.240

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  3 in total

1.  Bacillus subtilis TerC Family Proteins Help Prevent Manganese Intoxication.

Authors:  Srinand Paruthiyil; Azul Pinochet-Barros; Xiaojuan Huang; John D Helmann
Journal:  J Bacteriol       Date:  2020-01-02       Impact factor: 3.490

2.  Bruchid beetle ovipositioning mediated defense responses in black gram pods.

Authors:  Debajit Das; Indrani K Baruah; Debashis Panda; Ricky Raj Paswan; Sumita Acharjee; Bidyut Kumar Sarmah
Journal:  BMC Plant Biol       Date:  2021-01-11       Impact factor: 4.215

Review 3.  Towards understanding the extensive diversity of protein N-glycan structures in eukaryotes.

Authors:  Charlotte Toustou; Marie-Laure Walet-Balieu; Marie-Christine Kiefer-Meyer; Marine Houdou; Patrice Lerouge; François Foulquier; Muriel Bardor
Journal:  Biol Rev Camb Philos Soc       Date:  2021-12-06
  3 in total

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