| Literature DB >> 28068341 |
Abbas Kazerouni1, Lawrence M Wein2.
Abstract
Fecal microbiota transplantation is being assessed as a treatment for chronic microbiota-related diseases such as ulcerative colitis. Results from an initial randomized trial suggest that remission rates depend on unobservable features of the fecal donors and observable features of the patients. We use mathematical modeling to assess the efficacy of pooling stools from different donors during multiple rounds of treatment. In the model, there are two types of patients and two types of donors, where the patient type is observable and the donor type (effective or not effective) is not observable. In the model, clinical outcomes from earlier rounds of treatment are used to estimate the current likelihood that each donor is effective, and then each patient in each round is treated by a pool of donors that are currently deemed to be the most effective. Relative to the no-pooling case, pools of size two or three significantly increase the proportion of patients in remission during the first several rounds of treatment. Although based on data from a single randomized trial, our modeling suggests that pooling of stools - via daily cycling of encapsulated stool from several different donors - may be beneficial in fecal microbiota transplantation for chronic microbiota-related diseases.Entities:
Mesh:
Year: 2017 PMID: 28068341 PMCID: PMC5221766 DOI: 10.1371/journal.pone.0163956
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1A graphical depiction of Eq (12).
The model’s parameters, along with their descriptions and values.
| Parameter | Description | Value |
|---|---|---|
| number of type 1 (UC < 1 yr) patients | 10 | |
| number of type 2 (UC > 1 yr) patients | 90 | |
| number of treatment rounds | 5 | |
| initial number of fecal donors | 5, 10, 20 | |
| proportion of donors that are of type 1 (effective) | 0.2 | |
| remission probability for a type 0 donor and type 1 patient | 0.713 | |
| remission probability for a type 0 donor and type 2 patient | 0.138 | |
| remission probability for a type 1 donor and type 1 patient | 0.9 | |
| remission probability for a type 1 donor and type 2 patient | 0.329 | |
| pool size | 1, 2, 3, 4, 5 | |
|
| minimum sample size before adding a new donor | 15 |
Fig 2Results for the independence version of the problem with D1 = 5 initial donors.
Fig 3Results for the dependence version of the problem with D1 = 5 initial donors.