Literature DB >> 28068059

Subcellular Redox Targeting: Bridging in Vitro and in Vivo Chemical Biology.

Marcus J C Long1, Jesse R Poganik1, Souradyuti Ghosh1, Yimon Aye1,2.   

Abstract

Networks of redox sensor proteins within discrete microdomains regulate the flow of redox signaling. Yet, the inherent reactivity of redox signals complicates the study of specific redox events and pathways by traditional methods. Herein, we review designer chemistries capable of measuring flux and/or mimicking subcellular redox signaling at the cellular and organismal level. Such efforts have begun to decipher the logic underlying organelle-, site-, and target-specific redox signaling in vitro and in vivo. These data highlight chemical biology as a perfect gateway to interrogate how nature choreographs subcellular redox chemistry to drive precision redox biology.

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Year:  2017        PMID: 28068059      PMCID: PMC5592730          DOI: 10.1021/acschembio.6b01148

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   5.100


  169 in total

Review 1.  NF-κB, the first quarter-century: remarkable progress and outstanding questions.

Authors:  Matthew S Hayden; Sankar Ghosh
Journal:  Genes Dev       Date:  2012-02-01       Impact factor: 11.361

2.  Boronate oxidation as a bioorthogonal reaction approach for studying the chemistry of hydrogen peroxide in living systems.

Authors:  Alexander R Lippert; Genevieve C Van de Bittner; Christopher J Chang
Journal:  Acc Chem Res       Date:  2011-08-11       Impact factor: 22.384

3.  Rational design of reversible and irreversible cysteine sulfenic acid-targeted linear C-nucleophiles.

Authors:  Vinayak Gupta; Kate S Carroll
Journal:  Chem Commun (Camb)       Date:  2016-02-25       Impact factor: 6.222

4.  Protein carbonyl groups as biomarkers of oxidative stress.

Authors:  Isabella Dalle-Donne; Ranieri Rossi; Daniela Giustarini; Aldo Milzani; Roberto Colombo
Journal:  Clin Chim Acta       Date:  2003-03       Impact factor: 3.786

5.  Oxidative protein folding by an endoplasmic reticulum-localized peroxiredoxin.

Authors:  Ester Zito; Eduardo Pinho Melo; Yun Yang; Åsa Wahlander; Thomas A Neubert; David Ron
Journal:  Mol Cell       Date:  2010-12-10       Impact factor: 17.970

6.  Interaction of electrophilic lipid oxidation products with mitochondria in endothelial cells and formation of reactive oxygen species.

Authors:  Aimee Landar; Jaroslaw W Zmijewski; Dale A Dickinson; Claire Le Goffe; Michelle S Johnson; Ginger L Milne; Giuseppe Zanoni; Giovanni Vidari; Jason D Morrow; Victor M Darley-Usmar
Journal:  Am J Physiol Heart Circ Physiol       Date:  2005-12-30       Impact factor: 4.733

7.  Spatial, temporal, and quantitative manipulation of intracellular hydrogen peroxide in cultured cells.

Authors:  Ishraq Alim; Renee E Haskew-Layton; Hossein Aleyasin; Hengchang Guo; Rajiv R Ratan
Journal:  Methods Enzymol       Date:  2014       Impact factor: 1.600

8.  Structural basis for the phototoxicity of the fluorescent protein KillerRed.

Authors:  Philippe Carpentier; Sebastien Violot; Laurent Blanchoin; Dominique Bourgeois
Journal:  FEBS Lett       Date:  2009-07-30       Impact factor: 4.124

9.  Quantitative chemoproteomics for site-specific analysis of protein alkylation by 4-hydroxy-2-nonenal in cells.

Authors:  Jing Yang; Keri A Tallman; Ned A Porter; Daniel C Liebler
Journal:  Anal Chem       Date:  2015-02-09       Impact factor: 6.986

10.  A chemoproteomic platform to quantitatively map targets of lipid-derived electrophiles.

Authors:  Chu Wang; Eranthie Weerapana; Megan M Blewett; Benjamin F Cravatt
Journal:  Nat Methods       Date:  2013-12-01       Impact factor: 28.547

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  11 in total

1.  β-TrCP1 Is a Vacillatory Regulator of Wnt Signaling.

Authors:  Marcus John Long; Hong-Yu Lin; Saba Parvez; Yi Zhao; Jesse Richard Poganik; Paul Huang; Yimon Aye
Journal:  Cell Chem Biol       Date:  2017-07-20       Impact factor: 8.116

Review 2.  Proteomics and Beyond: Cell Decision-Making Shaped by Reactive Electrophiles.

Authors:  Xuyu Liu; Marcus J C Long; Yimon Aye
Journal:  Trends Biochem Sci       Date:  2018-10-13       Impact factor: 13.807

Review 3.  Redox Signaling by Reactive Electrophiles and Oxidants.

Authors:  Saba Parvez; Marcus J C Long; Jesse R Poganik; Yimon Aye
Journal:  Chem Rev       Date:  2018-08-27       Impact factor: 60.622

4.  Single-Protein-Specific Redox Targeting in Live Mammalian Cells and C. elegans.

Authors:  Alexandra Van Hall-Beauvais; Yi Zhao; Daniel A Urul; Marcus J C Long; Yimon Aye
Journal:  Curr Protoc Chem Biol       Date:  2018-08-07

Review 5.  Privileged Electrophile Sensors: A Resource for Covalent Drug Development.

Authors:  Marcus John Curtis Long; Yimon Aye
Journal:  Cell Chem Biol       Date:  2017-06-22       Impact factor: 8.116

Review 6.  Direct 1O2 optical excitation: A tool for redox biology.

Authors:  Alfonso Blázquez-Castro
Journal:  Redox Biol       Date:  2017-05-25       Impact factor: 11.799

7.  Ube2V2 Is a Rosetta Stone Bridging Redox and Ubiquitin Codes, Coordinating DNA Damage Responses.

Authors:  Yi Zhao; Marcus J C Long; Yiran Wang; Sheng Zhang; Yimon Aye
Journal:  ACS Cent Sci       Date:  2018-01-17       Impact factor: 14.553

Review 8.  Nanoparticle-Cell Interactions: Relevance for Public Health.

Authors:  Sabiha Runa; Michael Hussey; Christine K Payne
Journal:  J Phys Chem B       Date:  2017-11-21       Impact factor: 2.991

Review 9.  Getting the Message? Native Reactive Electrophiles Pass Two Out of Three Thresholds to be Bona Fide Signaling Mediators.

Authors:  Jesse R Poganik; Marcus J C Long; Yimon Aye
Journal:  Bioessays       Date:  2018-03-30       Impact factor: 4.345

10.  Precision Electrophile Tagging in Caenorhabditis elegans.

Authors:  Marcus J C Long; Daniel A Urul; Shivansh Chawla; Hong-Yu Lin; Yi Zhao; Joseph A Haegele; Yiran Wang; Yimon Aye
Journal:  Biochemistry       Date:  2017-09-12       Impact factor: 3.162

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