Literature DB >> 28063990

Efficient tuning of siRNA dose response by combining mixed polymer nanocarriers with simple kinetic modeling.

Chad T Greco1, Victoria G Muir1, Thomas H Epps2, Millicent O Sullivan3.   

Abstract

Two of the most prominent challenges that limit the clinical success of siRNA therapies are a lack of control over cargo release from the delivery vehicle and an incomplete understanding of the link between gene silencing dynamics and siRNA dosing. Herein, we address these challenges through the formulation of siRNA polyplexes containing light-respn>onsive n>an class="Chemical">polymer mixtures, whose varied compositions and triggered release behavior provide enhanced gene silencing and controlled dose responses that can be predicted by simple kinetic models. Through the straightforward mixing of two block copolymers, the level of gene knockdown was easily optimized to achieve the maximum level of GAPDH protein silencing in NIH/3T3 cells (~70%) using a single siRNA dose. The kinetic model was used to describe the dynamic changes in mRNA and protein concentrations in response to siRNA treatment. These predictions enabled the application of a second dose of siRNA to maximally suppress gene expression over multiple days, leading to a further 50% reduction in protein levels relative to those measured following a single dose. Furthermore, polyplexes remained dormant in cells until exposed to the photo-stimulus, demonstrating the complete control over siRNA activity as well as the stability of the nanocarriers. Thus, this work demonstrates that pairing advances in biomaterials design with simple kinetic modeling provides new insight into gene silencing dynamics and presents a powerful strategy to control gene expression through siRNA delivery. STATEMENT OF SIGNIFICANCE: Our manuscript describes two noteworthy impacts: (1) we designed mixed polymer formulations to enhance gene silencing, and (2) we simultaneously developed a simple kinetic model for determining optimal siRNA dose responses to maintain silencing over several days. These advances address critical challenges in siRNA delivery and provide new opportunities in therapeutics development. The structure-function relationships prevalent in these formulations were established to enable tuning and forecasting of nanocarrier efficiency a priori, leading to siRNA dosing regimens able to maximally suppress gene expression. Our advances are significant because the mixed polymer formulations provide a straightforward and scalable approach to tailor siRNA delivery regimens. Moreover, the implementation of accurate dosing frameworks addresses a major knowledge gap that has hindered clinical implementation of siRNA.
Copyright © 2017 Acta Materialia Inc. Published by Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Block copolymers; Gene silencing; Photo-responsive; Polyplexes; siRNA dosing

Mesh:

Substances:

Year:  2017        PMID: 28063990      PMCID: PMC5317101          DOI: 10.1016/j.actbio.2017.01.003

Source DB:  PubMed          Journal:  Acta Biomater        ISSN: 1742-7061            Impact factor:   8.947


  58 in total

1.  Polycation-siRNA nanoparticles can disassemble at the kidney glomerular basement membrane.

Authors:  Jonathan E Zuckerman; Chung Hang J Choi; Han Han; Mark E Davis
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-06       Impact factor: 11.205

2.  Advancing polymeric delivery systems amidst a nucleic acid therapy renaissance.

Authors:  Paul A Burke; Suzie H Pun; Theresa M Reineke
Journal:  ACS Macro Lett       Date:  2013-10-15       Impact factor: 6.903

3.  Light controllable siRNAs regulate gene suppression and phenotypes in cells.

Authors:  Quan N Nguyen; Rajesh V Chavli; Joao T Marques; Peter G Conrad; Die Wang; Weihai He; Barbara E Belisle; Aiguo Zhang; Larry M Pastor; Frank R Witney; May Morris; Frederic Heitz; Gilles Divita; Bryan R G Williams; Gary K McMaster
Journal:  Biochim Biophys Acta       Date:  2006-01-30

4.  Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans.

Authors:  A Fire; S Xu; M K Montgomery; S A Kostas; S E Driver; C C Mello
Journal:  Nature       Date:  1998-02-19       Impact factor: 49.962

5.  Evidence of RNAi in humans from systemically administered siRNA via targeted nanoparticles.

Authors:  Mark E Davis; Jonathan E Zuckerman; Chung Hang J Choi; David Seligson; Anthony Tolcher; Christopher A Alabi; Yun Yen; Jeremy D Heidel; Antoni Ribas
Journal:  Nature       Date:  2010-03-21       Impact factor: 49.962

6.  Low-molecular-weight polyethylenimine as a non-viral vector for DNA delivery: comparison of physicochemical properties, transfection efficiency and in vivo distribution with high-molecular-weight polyethylenimine.

Authors:  Klaus Kunath; Anke von Harpe; Dagmar Fischer; Holger Petersen; Ulrich Bickel; Karlheinz Voigt; Thomas Kissel
Journal:  J Control Release       Date:  2003-04-14       Impact factor: 9.776

7.  Gene silencing by gold nanoshell-mediated delivery and laser-triggered release of antisense oligonucleotide and siRNA.

Authors:  Ryan Huschka; Aoune Barhoumi; Qing Liu; Jack A Roth; Lin Ji; Naomi J Halas
Journal:  ACS Nano       Date:  2012-08-13       Impact factor: 15.881

Review 8.  Polymer-based siRNA delivery: perspectives on the fundamental and phenomenological distinctions from polymer-based DNA delivery.

Authors:  Dana J Gary; Nitin Puri; You-Yeon Won
Journal:  J Control Release       Date:  2007-05-26       Impact factor: 9.776

9.  N-acetylgalactosamine functionalized mixed micellar nanoparticles for targeted delivery of siRNA to liver.

Authors:  Hong-Xia Wang; Meng-Hua Xiong; Yu-Cai Wang; Jing Zhu; Jun Wang
Journal:  J Control Release       Date:  2012-12-20       Impact factor: 9.776

10.  Insights into the kinetics of siRNA-mediated gene silencing from live-cell and live-animal bioluminescent imaging.

Authors:  Derek W Bartlett; Mark E Davis
Journal:  Nucleic Acids Res       Date:  2006-01-12       Impact factor: 16.971

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  5 in total

1.  Anionic Polymer and Quantum Dot Excipients to Facilitate siRNA Release and Self-Reporting of Disassembly in Stimuli-Responsive Nanocarrier Formulations.

Authors:  Chad T Greco; Jason C Andrechak; Thomas H Epps; Millicent O Sullivan
Journal:  Biomacromolecules       Date:  2017-05-10       Impact factor: 6.988

2.  Predicting Gene Silencing Through the Spatiotemporal Control of siRNA Release from Photo-responsive Polymeric Nanocarriers.

Authors:  Chad T Greco; Thomas H Epps; Millicent O Sullivan
Journal:  J Vis Exp       Date:  2017-07-21       Impact factor: 1.355

3.  Attenuation of Maladaptive Responses in Aortic Adventitial Fibroblasts through Stimuli-Triggered siRNA Release from Lipid-Polymer Nanocomplexes.

Authors:  Chad T Greco; Robert E Akins; Thomas H Epps; Millicent O Sullivan
Journal:  Adv Biosyst       Date:  2017-07-20

4.  Quercetin Inhibits Lef1 and Resensitizes Docetaxel-Resistant Breast Cancer Cells.

Authors:  Marta Prieto-Vila; Iwao Shimomura; Akiko Kogure; Wataru Usuba; Ryou-U Takahashi; Takahiro Ochiya; Yusuke Yamamoto
Journal:  Molecules       Date:  2020-06-01       Impact factor: 4.411

5.  Kinetic Modeling to Accelerate the Development of Nucleic Acid Formulations.

Authors:  Esther H Roh; Thomas H Epps; Millicent O Sullivan
Journal:  ACS Nano       Date:  2021-10-12       Impact factor: 18.027

  5 in total

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