Literature DB >> 28062553

Neurobrucellosis: Unexpected Answer From Metagenomic Next-Generation Sequencing.

Kanokporn Mongkolrattanothai1, Samia N Naccache2,3,4, Jeffrey M Bender1, Erik Samayoa3,4, Elizabeth Pham3,4, Guixia Yu3,4, Jennifer Dien Bard2, Steve Miller3,4, Grace Aldrovandi1,5, Charles Y Chiu3,6,4.   

Abstract

A diagnosis of brucellosis can be difficult because routine culture and serological methods exhibit variable sensitivity and specificity. We present the use of a metagenomic next- generation sequencing assay to diagnose a case of neurobrucellosis from cerebrospinal fluid, resulting in the institution of appropriate antibiotic treatment and a favorable clinical outcome.
© The Author 2017. Published by Oxford University Press on behalf of The Journal of the Pediatric Infectious Diseases Society. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Entities:  

Keywords:  diagnostic microbiology; encephalitis; meningitis; metagenomic next-generation sequencing; neurobrucellosis

Mesh：

Year:  2017        PMID： 28062553      PMCID： PMC6251619          DOI： 10.1093/jpids/piw066

Source DB:  PubMed          Journal:  J Pediatric Infect Dis Soc        ISSN： 2048-7193            Impact factor:   3.164


  19 in total

1.  Neurobrucellosis: clinical and neuroimaging correlation.

Authors:  M Walid Al-Sous; Saeed Bohlega; M Zuheir Al-Kawi; Jehad Alwatban; Donald R McLean
Journal:  AJNR Am J Neuroradiol       Date:  2004-03       Impact factor: 3.825

2.  A novel outbreak enterovirus D68 strain associated with acute flaccid myelitis cases in the USA (2012-14): a retrospective cohort study.

Authors:  Alexander L Greninger; Samia N Naccache; Kevin Messacar; Anna Clayton; Guixia Yu; Sneha Somasekar; Scot Federman; Doug Stryke; Christopher Anderson; Shigeo Yagi; Sharon Messenger; Debra Wadford; Dongxiang Xia; James P Watt; Keith Van Haren; Samuel R Dominguez; Carol Glaser; Grace Aldrovandi; Charles Y Chiu
Journal:  Lancet Infect Dis       Date:  2015-03-31       Impact factor: 25.071

Review 3.  Brucellosis.

Authors:  Georgios Pappas; Nikolaos Akritidis; Mile Bosilkovski; Epameinondas Tsianos
Journal:  N Engl J Med       Date:  2005-06-02       Impact factor: 91.245

4.  Neurobrucellosis: clinical and diagnostic features.

Authors:  Tumer Guven; Kenan Ugurlu; Onder Ergonul; Aysel Kocagul Celikbas; Sebnem Eren Gok; Selcuk Comoglu; Nurcan Baykam; Basak Dokuzoguz
Journal:  Clin Infect Dis       Date:  2013-02-27       Impact factor: 9.079

5.  Brucellosis and tuberculosis: clinical overlap and pitfalls.

Authors:  Sowjanya Dasari; Kushal Naha; Mukhyaprana Prabhu
Journal:  Asian Pac J Trop Med       Date:  2013-10       Impact factor: 1.226

6.  False positive seroreactivity to brucellosis in tuberculosis patients: a prevalence study.

Authors:  Mojtaba Varshochi; Jafar Majidi; Marjan Amini; Kamyar Ghabili; Mohammadali M Shoja
Journal:  Int J Gen Med       Date:  2011-03-14

7.  DNA extraction columns contaminated with murine sequences.

Authors:  Otto Erlwein; Mark J Robinson; Simon Dustan; Jonathan Weber; Steve Kaye; Myra O McClure
Journal:  PLoS One       Date:  2011-08-18       Impact factor: 3.240

8.  Clinical metagenomic identification of Balamuthia mandrillaris encephalitis and assembly of the draft genome: the continuing case for reference genome sequencing.

Authors:  Alexander L Greninger; Kevin Messacar; Thelma Dunnebacke; Samia N Naccache; Scot Federman; Jerome Bouquet; David Mirsky; Yosuke Nomura; Shigeo Yagi; Carol Glaser; Michael Vollmer; Craig A Press; Bette K Kleinschmidt-DeMasters; Bette K Klenschmidt-DeMasters; Samuel R Dominguez; Charles Y Chiu
Journal:  Genome Med       Date:  2015-12-01       Impact factor: 11.117

9.  Tuberculous meningitis: diagnosis and treatment overview.

Authors:  Grace E Marx; Edward D Chan
Journal:  Tuberc Res Treat       Date:  2011-12-21

10.  Common contaminants in next-generation sequencing that hinder discovery of low-abundance microbes.

Authors:  Martin Laurence; Christos Hatzis; Douglas E Brash
Journal:  PLoS One       Date:  2014-05-16       Impact factor: 3.240
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  35 in total

1.  Evaluation of the CosmosID Bioinformatics Platform for Prosthetic Joint-Associated Sonicate Fluid Shotgun Metagenomic Data Analysis.

Authors:  Qun Yan; Yu Mi Wi; Matthew J Thoendel; Yash S Raval; Kerryl E Greenwood-Quaintance; Matthew P Abdel; Patricio R Jeraldo; Nicholas Chia; Robin Patel
Journal:  J Clin Microbiol       Date:  2019-01-30       Impact factor: 5.948

2.  Direct Detection and Identification of Prosthetic Joint Infection Pathogens in Synovial Fluid by Metagenomic Shotgun Sequencing.

Authors:  Morgan I Ivy; Matthew J Thoendel; Patricio R Jeraldo; Kerryl E Greenwood-Quaintance; Arlen D Hanssen; Matthew P Abdel; Nicholas Chia; Janet Z Yao; Aaron J Tande; Jayawant N Mandrekar; Robin Patel
Journal:  J Clin Microbiol       Date:  2018-08-27       Impact factor: 5.948

Review 3.  Chronic Meningitis.

Authors:  Kiran T Thakur; Michael R Wilson
Journal:  Continuum (Minneap Minn)       Date:  2018-10

4.  Development and Optimization of Metagenomic Next-Generation Sequencing Methods for Cerebrospinal Fluid Diagnostics.

Authors:  Patricia J Simner; Heather B Miller; Florian P Breitwieser; Gabriel Pinilla Monsalve; Carlos A Pardo; Steven L Salzberg; Cynthia L Sears; David L Thomas; Charles G Eberhart; Karen C Carroll
Journal:  J Clin Microbiol       Date:  2018-08-27       Impact factor: 5.948

Review 5.  From the Pipeline to the Bedside: Advances and Challenges in Clinical Metagenomics.

Authors:  Augusto Dulanto Chiang; John P Dekker
Journal:  J Infect Dis       Date:  2020-03-28       Impact factor: 5.226

Review 6.  A review of methods and databases for metagenomic classification and assembly.

Authors:  Florian P Breitwieser; Jennifer Lu; Steven L Salzberg
Journal:  Brief Bioinform       Date:  2019-07-19       Impact factor: 11.622

Review 7.  Encephalitis in US Children.

Authors:  Kevin Messacar; Marc Fischer; Samuel R Dominguez; Kenneth L Tyler; Mark J Abzug
Journal:  Infect Dis Clin North Am       Date:  2017-12-08       Impact factor: 5.982

8.  Retrospective Review of Clinical Utility of Shotgun Metagenomic Sequencing Testing of Cerebrospinal Fluid from a U.S. Tertiary Care Medical Center.

Authors:  Kyle G Rodino; Michel Toledano; Andrew P Norgan; Bobbi S Pritt; Matthew J Binnicker; Joseph D Yao; Allen J Aksamit; Robin Patel
Journal:  J Clin Microbiol       Date:  2020-11-18       Impact factor: 5.948

Review 9.  Diagnostic Testing of Neurologic Infections.

Authors:  Prashanth S Ramachandran; Michael R Wilson
Journal:  Neurol Clin       Date:  2018-11       Impact factor: 3.806

Review 10.  Metagenomic Next-Generation Sequencing for Diagnosis of Pediatric Meningitis and Encephalitis: A Review.

Authors:  Kelly Graff; Samuel R Dominguez; Kevin Messacar
Journal:  J Pediatric Infect Dis Soc       Date:  2021-12-24       Impact factor: 3.164
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