| Literature DB >> 28060326 |
Ancor Sanz-García1, Lorena Vega-Zelaya2, Jesús Pastor2, Cristina V Torres3, Rafael G Sola3, Guillermo J Ortega4.
Abstract
Approximately 30% of epilepsy patients are refractory to antiepileptic drugs. In these cases, surgery is the only alternative to eliminate/control seizures. However, a significant minority of patients continues to exhibit post-operative seizures, even in those cases in which the suspected source of seizures has been correctly localized and resected. The protocol presented here combines a clinical procedure routinely employed during the pre-operative evaluation of temporal lobe epilepsy (TLE) patients with a novel technique for network analysis. The method allows for the evaluation of the temporal evolution of mesial network parameters. The bilateral insertion of foramen ovale electrodes (FOE) into the ambient cistern simultaneously records electrocortical activity at several mesial areas in the temporal lobe. Furthermore, network methodology applied to the recorded time series tracks the temporal evolution of the mesial networks both interictally and during the seizures. In this way, the presented protocol offers a unique way to visualize and quantify measures that considers the relationships between several mesial areas instead of a single area.Entities:
Mesh:
Year: 2016 PMID: 28060326 PMCID: PMC5226423 DOI: 10.3791/54746
Source DB: PubMed Journal: J Vis Exp ISSN: 1940-087X Impact factor: 1.355
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| 4.3 | (stats package) Computes the Fast Fourier Transform of a signal. |
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| 4.4 | (stats package) Creates a multivariate time-series object (mts). The sampling frequency should be provided. |
| Excitability | 5.1.1 | (homemade) function based on |
| Power spectral Density and Spectral Entropy | 5.1.2 | (Homemade) function based on |
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| 5.2.1 | (base package) calculates the linear cross-correlation of mts object by using Pearson correlation at zero lag, generating a correlation matrix. Absolute values should be calculated. |
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| 5.2.2 | (igraph package) Creates an igraph graph, the basic object used by the following igraph functions |
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| 5.2.3 | (igraph package) determines the average path length of the graph, by computing the average number of steps along the shortest paths through all of the network nodes. |
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| 5.2.3 | (igraph package) Computes the density of links of the graph by computing the ratio between the actual number of links and all possible links of the network. |
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| 5.2.3 | (igraph package) Determines the modularity of the graph, by computing which groups of nodes are more connected between them than with other nodes of the network |
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| 5.2.3 | (igraph package) Determines the average clustering coefficient of the graph, by computing the proportion of neighboring nodes that are also neighbors of one another |
| Phase synchronization | 5.2.4 | (homemade) function based in |
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| 5.3 | (MBESS package) Determines the standard mean difference -size effects- by computing the difference in mean between groups relative to the pooled difference |