Literature DB >> 28054568

Single-virus tracking uncovers the missing link between HIV integration site location and viral gene expression.

Angela Ciuffi1, Sara Cristinelli1, Sylvie Rato1.   

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Year:  2017        PMID： 28054568     DOI： 10.1038/nsmb.3358

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN： 1545-9985            Impact factor:   15.369


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  15 in total

Review 1.  Genome-wide analysis of retroviral DNA integration.

Authors:  Frederic Bushman; Mary Lewinski; Angela Ciuffi; Stephen Barr; Jeremy Leipzig; Sridhar Hannenhalli; Christian Hoffmann
Journal:  Nat Rev Microbiol       Date:  2005-11       Impact factor: 60.633

2.  HIV integration site selection: analysis by massively parallel pyrosequencing reveals association with epigenetic modifications.

Authors:  Gary P Wang; Angela Ciuffi; Jeremy Leipzig; Charles C Berry; Frederic D Bushman
Journal:  Genome Res       Date:  2007-06-01       Impact factor: 9.043

3.  Chromatin position effects assayed by thousands of reporters integrated in parallel.

Authors:  Waseem Akhtar; Johann de Jong; Alexey V Pindyurin; Ludo Pagie; Wouter Meuleman; Jeroen de Ridder; Anton Berns; Lodewyk F A Wessels; Maarten van Lohuizen; Bas van Steensel
Journal:  Cell       Date:  2013-08-15       Impact factor: 41.582

4.  Position effects influence HIV latency reversal.

Authors:  Heng-Chang Chen; Javier P Martinez; Eduard Zorita; Andreas Meyerhans; Guillaume J Filion
Journal:  Nat Struct Mol Biol       Date:  2016-11-21       Impact factor: 15.369

5.  The site of HIV-1 integration in the human genome determines basal transcriptional activity and response to Tat transactivation.

Authors:  A Jordan; P Defechereux; E Verdin
Journal:  EMBO J       Date:  2001-04-02       Impact factor: 11.598

Review 6.  The benefits of integration.

Authors:  A Ciuffi
Journal:  Clin Microbiol Infect       Date:  2016-04       Impact factor: 8.067

7.  Orientation-dependent regulation of integrated HIV-1 expression by host gene transcriptional readthrough.

Authors:  Yefei Han; Yijie B Lin; Wenfeng An; Jie Xu; Hung-Chih Yang; Karen O'Connell; Dominic Dordai; Jef D Boeke; Janet D Siliciano; Robert F Siliciano
Journal:  Cell Host Microbe       Date:  2008-08-14       Impact factor: 21.023

8.  HIV latency and integration site placement in five cell-based models.

Authors:  Scott Sherrill-Mix; Mary K Lewinski; Marylinda Famiglietti; Alberto Bosque; Nirav Malani; Karen E Ocwieja; Charles C Berry; David Looney; Liang Shan; Luis M Agosto; Matthew J Pace; Robert F Siliciano; Una O'Doherty; John Guatelli; Vicente Planelles; Frederic D Bushman
Journal:  Retrovirology       Date:  2013-08-16       Impact factor: 4.602

9.  Rapid quantification of the latent reservoir for HIV-1 using a viral outgrowth assay.

Authors:  Gregory M Laird; Evelyn E Eisele; S Alireza Rabi; Jun Lai; Stanley Chioma; Joel N Blankson; Janet D Siliciano; Robert F Siliciano
Journal:  PLoS Pathog       Date:  2013-05-30       Impact factor: 6.823

10.  New ex vivo approaches distinguish effective and ineffective single agents for reversing HIV-1 latency in vivo.

Authors:  C Korin Bullen; Gregory M Laird; Christine M Durand; Janet D Siliciano; Robert F Siliciano
Journal:  Nat Med       Date:  2014-03-23       Impact factor: 53.440
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  2 in total

Review 1.  Spatiotemporally Orchestrated Interactions between Viral and Cellular Proteins Involved in the Entry of African Swine Fever Virus.

Authors:  Kehui Zhang; Su Li; Sheng Liu; Shuhong Li; Liang Qu; George F Gao; Hua-Ji Qiu
Journal:  Viruses       Date:  2021-12-13       Impact factor: 5.048

2.  Analysis of ex vivo HIV-1 infection in a controller-discordant couple.

Authors:  Paradise Madlala; Paulien Van de Velde; Barbara Van Remoortel; Sofie Vets; Eric Van Wijngaerden; Kristel Van Laethem; Rik Gijsbers; Rik Schrijvers; Zeger Debyser
Journal:  J Virus Erad       Date:  2018-07-01
  2 in total

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