Literature DB >> 28050161

Capoeta coadi, a new species of cyprinid fish from the Karun River drainage, Iran based on morphological and molecular evidences (Teleostei, Cyprinidae).

Nisreen H Alwan1, Halimeh Zareian2, Hamid Reza Esmaeili2.   

Abstract

As presently recognized, the genus Capoeta includes 24 species, nine of which are known to occur in Iran (Capoeta aculeata, Capoeta capoeta, Capoeta buhsei, Capoeta damascina, Capoeta fusca, Capoeta heratensis, Capoeta mandica, Capoeta saadii and Capoeta trutta) and are distributed in almost all Iranian basins except Sistan and Mashkid. Capoeta coadisp. n. is a new species from the Karun River, southern Iran, draining into the Arvand Rud (Shatt al-Arab) which drains into the Persian Gulf. It is distinguished from all other species of Capoeta by the combination of the following characters: elongate and usually cylindrical body; 8-9 branched dorsal-fin rays; last unbranched dorsal-fin ray weakly to moderately ossified and serrated along 1/3-2/3 of its length; scales small; 70-84 in lateral line (total); 12-17 scales between dorsal-fin origin and lateral line; 9-11 scales between anal-fin origin and lateral line; 26-32 circum-peduncular scales; 10-13 gill rakers on lower limb of first gill arch; 45-47 total vertebrae; one posterior pair of barbels; bright golden-greenish or silvery body coloration in life; length of the longest dorsal-fin ray 15-22% SL; head length 23-26% SL; mouth width 7-10% SL. Capoeta coadi is also distinguished from all other congeners in the Iranian drainages by fixed diagnostic nucleotide substitutions in the mtDNA COI barcode region and cyt b. It is nested in the Capoeta damascina species complex.

Entities:  

Keywords:  COI; Capoeta damascina species complex; Cyt b; Persian Gulf; phylogenetic relationships

Year:  2016        PMID: 28050161      PMCID: PMC4843988          DOI: 10.3897/zookeys.572.7377

Source DB:  PubMed          Journal:  Zookeys        ISSN: 1313-2970            Impact factor:   1.546


Introduction

The Middle East is a transition zone between three major biogeographic units, the Palaearctic, the Afrotropical, and the Oriental realms. It served as an important crossroad of biotic exchange resulting in an outstanding biological diversity of freshwater fishes (Durand et al. 2002, Krupp et al. 2009). Lying between major drainages of the Nile in Africa to the west, the Indus in southern Asia to the east and the Caspian and Black Sea drainages to the north, the Tigris-Euphrates River drainage is the largest river system in the Middle East and has high fish diversity, especially in cyprinid fishes. Valenciennes in Cuvier and Valenciennes 1842 is an example of a cyprinid genus widely spread in the Middle East (Krupp and Schneider 1989). Being found in a wide range of habitats, species of this genus display considerable morphological variability (e.g., scale counts and colour pattern) and the extent of morphological plasticity and genetic variability remain to be determined. As a consequence, there has been considerable disagreement regarding the status of several species. However, is considered monophyletic (Krupp 1985, Küçük et al. 2009). Members of the genus are cyprinids characterized by having an elongate, cylindrical body and a short dorsal fin. They have three to five unbranched and 5–9 branched dorsal-fin rays, the last unbranched ray being ossified and serrated. All species have three unbranched and 5 branched anal-fin rays. Scales are usually small. Mouth is inferior and the lower lip is covered with a horny sheath. One pair of barbels (rarely two) is present and the pharyngeal teeth are arranged in three rows. The shape of the mouth as well as the pharyngeal teeth are nearly identical in all species, which indicate their adaptation to the same mode of feeding. This combination of character states distinguishes from all other cyprinids (Krupp 1985, Krupp and Schneider 1989). As presently recognized, the genus includes about 24 species (Eschmeyer and Fricke 2016) in different phylogenetic groups widely distributed in many river drainages and basins in southwestern Asia except the Arabian Peninsula (Alwan 2011, Levin et al. 2012). Levin et al. (2012) studied the phylogenetic relationships of the genus based on complete mitochondrial gene for cytochrome b sequences obtained from 20 species from the overall range of the genus. Three main groups were detected: the Mesopotamian group ( group), the Anatolian-Iranian group ( group) and the Aralo-Caspian group ( group). Members of the species group, characterized by having small scales, include Kessler, 1877, Schöter, Özuluğ & Freyhof, 2009, (Valenciennes, 1842), Karaman, 1969, (Heckel, 1847), and (Heckel, 1843) (Alwan 2011). Based on phylogenetic analyses of and the large subunit (LSU or 28S) ribosomal RNA gene sequences Alwan (2011) identified two main lineages within what we will refer to in this paper, as the “ species complex”. A western lineage is represented by , and and an eastern lineage represented by , , and a new undescribed species. cytochrome c oxidase subunit I Traditionally, is recorded from Tigris, Mond, Kor, Esfahan, Dasht-e Kavir, Namak Lake, Kor River, Lake Maharlu, Persian Gulf (now Persis), Kerman-Na’in, Dasht-e Lut, Sirjan, Hormuz, and Hamun-e Jaz Murian basins in Iran (Nikol’skii 1899, Berg 1949, Kähsbauer 1964, Armantrout 1980, Rainboth 1981, Bianco and Banarescu 1982, Ghorbani Chafi 2000, Jalali et al. 2005, Esmaeili et al. 2010, Bahrami Kamangar et al. 2012). Its distribution over such wide range of isolated water bodies, raises questions regarding the status of . Currently, s.l. represents a complex of closely related species with high intraspecific and comparatively low interspecific variation (Alwan 2011, Levin et al. 2012). Now, three species of from Iranian water bodies are recognized as being members of species complex group: , (Iranian populations were considered as ) (see Alwan 2011, Levin et al. 2012), and a new undescribed species from the Karun (Karoun) River drainage. It is described here as a new species, .

Material and methods

After anaesthesia, fishes were either fixed in 5% formaldehyde, and stored in 70% ethanol, or directly fixed in 99% ethanol (for molecular studies). Measurements were made with a digital caliper and recorded to 0.01 mm. All measurements were made point to point, and never by projections. Methods for counts and measurements follow Hubbs and Lagler (1958) and Krupp (1983). was measured from the tip of the snout to the end of the hypural complex. The length of the caudal peduncle was measured from behind the base of the last anal-fin ray to the end of the hypural complex. The last two branched rays articulating on a single pterygiophore in the dorsal and anal fins are counted as “1½”.The holotype is included in the calculation of means and SD. Standard length Abbreviations used: SL; HL. , standard length , lateral head length Abbreviations used for museum collections: , the : Frankfurt, Germany), and the private collection of : Fischsammlung J. Freyhof). Zoological Museum of Shiraz University, Collection of Biology Department, Shiraz, Iran Senckenberg Research Institute and Natural History Museum Jörg Freyhof

DNA extraction and PCR amplification protocol

For DNA sequencing, specimens were directly fixed in 99% molecular grade ethanol. Mitochondrial DNA was extracted using Salt method (Bruford et al. 1992). The standard vertebrate DNA barcode region of the COI (cytochrome c oxidase subunit 1) and cytochrome b (cyt b) were amplified using primer pairs named FishF1-5'TCAACCAACCACAAAGACATTGGCAC3’ and FishR1-5'TAGACTTCTGGGTGGCCAAAGAATCA3’ (Ward et al. 2005) and L14724-PageBreak5'GTGACTTGAAAAACCACCGTTG3’ and H15915-5'CAACGATCTCCGGTTTAGAAGAC3’ (Xiao et al. 2001) or GluF- 5'AACCACCGTTGTATTCAACTACAA3’ and H-15560 5`TAGGCRAATAGGAAR TATCA3` (Machordom and Doadrio 2001), respectively. Purification and sequencing of the PCR products were conducted at Macrogen Korea Laboratories using the aforementioned primer sets.

Molecular data analyses

Data processing and sequence assembly was done in BioEdit 7.2.5 (Hall 1999); MEGA6 (Tamura et al. 2013) was used to create a DNA sequence alignment. No indications of unexpected stop-codons or nuclear copies of mitochondrial fragments occurred in any sequences. All generated DNA barcodes and cyt b were deposited in the NCBI GenBank. The most appropriate sequence evolution model for the given data was determined with Modeltest (Posada and Crandall 1998) as implemented in the MEGA6 software, treating gaps and missing data with the partial deletion option under 95% site coverage cut-off. The model with the lowest BIC score is considered the best model to describe the substitution pattern for each gene. To explore species phylogenetic relationships, trees were generated using Maximum Likelihood analysis with 10,000 bootstrap replicates in RaxML 7.2.5 (Stamatakis 2006) under the GTR+G model of nucleotide substitution, with fast bootstrap and also , using the , with 6,000,000 generations under the most generalizing model (GTR+G+I) using Mr. Bayes 3.1.1 (Huelsenbeck and Ronquist 2001). Screening for diagnostic nucleotide substitutions was performed manually from the sequence alignment. As an appropriate outgroup to root the constructed phylogenetic hypothesis, we included the distantly related . (Bayesian Information Criterion) Bayesian analysis Markov Chain Monte Carlo method

Results

Morphological assessments

sp. n.

http://zoobank.org/4B5B0984-0C65-4B6D-97CC-31245E179D13 Figs 1 , 2 , 3
Figure 1.

sp. n., ZM-CBSU Z190, holotype, 157 mm SL; Iran: Kohgiluyeh and Boyer Ahmad, Beshar River, Karun River drainage.

Figure 2.

sp. n., paratypes: a ZM-CBSU Z191; 157 mm SL b ZM-CBSU Z192, 148 mm SL; Iran: Kohgiluyeh and Boyer Ahmad, Beshar River, Karun River drainage.

Figure 3.

Live specimen of sp. n, Iran: Kohgiluyeh and Boyer Ahmad, Beshar River, Karun River drainage.

Holotype.

ZM-CBSU Z190, 157 mm SL; Iran, Kohgiluyeh and Boyer Ahmad prov., Beshar (Bashar) River at Tale Gah village, Karun River drainage, 30°47'27"N, 51°25'13"E.

Paratypes.

ZM-CBSU Z191, 6, 91–157 mm SL; same data as holotype. ZM-CBSU J520, 1, 107 mm SL; ZM-CBSU Z275, 12, 105–152 mm SL; Iran, KohPageBreakgiluyeh and Boyer Ahmad prov., Beshar (Bashar) River at Tale Gah village, Karun River drainage, 30°47'27"N, 51°25'13"E. 15 December 2014, G. Sayyadzadeh, R. Khaefi, A. Khajehpanah. ZM-CBSU J526, 1, 98 mm SL; ZM-CBSU J533, 1, 114 mm SL; ZM-CBSU J535, 1, 97 mm SL; ZM-CBSU J540, 1, 67 mm SL; All from Iran, Kohgiluyeh and Boyer Ahmad prov., Beshar River at Tange sorkh, Karun River drainage, 30°26'14"N, 51°45'48"E. 24 July 2011, R. Zamaneian Nejad, S. Mirgheiasi, S. Ghasemian. ZM-CBSU J444, 2, 73–90 mm SL; ZM-CBSU J447, 2, 76–111 mm SL; ZM-CBSU J450, 1, 86 mm SL; ZM-CBSU J452, 1, 107 mm SL; ZM-CBSU J459, 2, 104–120 mm SL; ZM-CBSU J464, 1, 110 mm SL; all from Iran, Kohgiluyeh and Boyer Ahmad prov., Beshar River at Mokhtar village, Karun River drainage, 30°40'31"N, 51°31'26"E. 25 May 2011, R. Zamaneian Nejad.

Additional material.

ZM-CBSU 7880–7881, 2, 96.69–158.12 mm SL; Iran, Fars prov., Sepidan city, Gorgu River, a tributary of Beshar River, north of Sepidan city, Karun River drainage, 30°21.283'N, 51°45.754'E. 2006. H.R. Esmaeili, A. Teimori, M. Ebrahimi and A. Gholamhoseini. SMF 33337, 1, 48.86 mm SL; Iran, Lorestan prov., Hadi River between Zagheh and Polehoru, 33°31.138'N, 48°46.340'E. 04 March 2008. N. Alwan, K. Borkenhagen, M. Ghanbari Fardi and A. Kazemi. FSJF 2213, 11, 107.92–143.94 mm SL; Iran, Chaharmahal and Bakhtiari Prov., Sandgan River (Sandgan stream) at Sandgan, 31°15.692'N, 51°17.150'E. 19 April 2007, A. Abdoli and J. Freyhof. FSJF 2233, 2, 156.22–162.23 mm SL; Iran, Kohgiluyeh and Boyer Ahmad prov., Beshar River, 20 km northeast of Yasuj, 30°44.152'N, 51°29.522'E. 19 April 2007. A. Abdoli and J. Freyhof. SMF 30865, 1, 26.94 mm SL; Iran, Kohgiluyeh and Boyer Ahmad prov., Beshar River at Tang-e Sorkh, 30°27.680'N, 51°44.907'E. 28 November 2007, K. Borkenhagen, H. R. Esmaeili and F. Wicker (in 96% alcohol). SMF 30871, 1, 28.34 mm SL; Iran, Kohgiluyeh and Boyer Ahmad prov., Beshar River at Tang-e Sorkh, 30°27.680'N, 51°44.907'E. 28 November 2007. K. Borkenhagen, H. R. Esmaeili and F. Wicker (in 96% alcohol). SMF 33316, 7, 35.22–166.87 mm SL; Iran, Kohgiluyeh and Boyer Ahmad prov., Beshar River at Tang-e Sorkh, 30°27.680'N, 51°44.907'E. 28 November 2007, K. Borkenhagen, H. R. Esmaeili and F. Wicker. SMF 30872, 1, 29.70 mm SL; Iran, Fars prov., Sepidan, Tang-e Tizab, 30°23.470'N, 51°46.710'E, 28 November 2007, K. Borkenhagen, H. R. Esmaeili and F. Wicker (in 96% alcohol).

specimens used for molecular genetic analysis.

ZM-CBSU M1275,1, Iran, Kohgiluyeh and Boyer Ahmad prov., Beshar River at Dehno village, Karun River drainage, 30°38'55"N, 51°37'05"E. 16 January 2014, H.R. Esmaeili, G. Sayyadzadeh, H.R. Mehraban, M. Razbani. GenBank accession number: (COI: KU564296); ZM-CBSU M1447, 2, GenBank accession number: (COI: KU564297, KU564298; cytb: KU564303, KU564304) ZM-CBSU M1458, 2); Iran, Kohgiluyeh and Boyer Ahmad prov., Beshar River at Tale Gah village, Karun River drainage, 30°47'27"N, 51°25'13"E. 14 December 2013. G. Sayyadzadeh, A. Khajehpanah, R. Khaefi. GenBank accession number: (COI: KU564294, KU564295; cytb: KU564305, KU564306).

Diagnosis.

sp. n. is distinguished from all other species of by the following combination of characters: last unbranched dorsal-fin ray weakly to moderately ossified and serrated in 1/3–2/3 of its length; scales small, 70–84 total lateral line scales (84 in holotype), 12–17 scales between dorsal-fin origin and lateral line (16 in holotype), 9–11 scales between anal-fin origin and lateral line (11 in holotype), 26–32 encircling least circumference of caudal peduncle (31 in holotype); total gill rakers 14–18 (17 in holotype), 10–13 gill rakers on lower limb of first gill arch (12 in holotype); 45–47 total vertebrae; one posterior pair of barbels; length of the longest dorsal-fin ray 14.92–21.58% SL (18.90 in holotype); head length 22.87–26.33% SL (23.76 in holotype); mouth width 7.48–9.77% SL (8.65 in holotype); bright golden-greenish or silvery body coloration in life.

Description.

General body shape and appearance are shown in Figs 1–3, morphometric data in Table 1 and meristic data are summarized in Tables 2–9. Body elongate and cylindrical; predorsal body profile smoothly convex with no marked discontinuity between head and body except when a nuchal hump is present in few specimens; greatest body depth at level of dorsal-fin origin; snout rounded (in 20 specimens) or pointed (in 14 specimens) and not size dependent; mouth inferior; lips slightly fleshy, especially at the mouth corners; lower lip covered with a sharp-edged horny sheath, its anterior margin straight in adult specimens and rounded to almost crescent-shaped in juveniles, with a considerable degree of individual variation.
Table 1.

Morphometric data of sp. n. (holotype ZM-CBSU Z190, and 33 paratypes), and .

HolotypeParatypes (n=33) Capoeta buhsei (n=27) Capoeta saadii (n=20)
RangeMeanSDRangeMeanSDRangeMeanSD
Standard length (mm)157.6467.23–157.64110.6774.30–149.30112.5651.31–231109.30
In percent of standard length
Head length23.7622.87–26.3324.50.8021.47–25.9823.560.9824.28–29.6226.841.32
Body depth at dorsal-fin origin21.8221.33–25.0423.150.9819.78–24.5521.821.1919.58–27.7823.322.11
Predorsal length49.0747.75–53.4350.231.3148.85–55.0551.591.3444.33–55.1251.932.51
Postdorsal length54.1354.13–63.1957.531.8848.20–60.1355.242.7850.79–59.6455.062.60
Preanal length72.4570.22–76.1472.81.3671.34–76.3474.011.2869.37–78.3875.612.07
Prepelvic length53.7450.22–55.9052.841.3150.17–56.6453.581.4951.23–61.2156.222.36
Distance between pectoral and pelvic-fin origins32.4227.81–32.4230.191.1329.07–33.6431.301.0425.55–32.6630.872.15
Distance between pelvic and anal-fin origins21.4819.31–23.1721.120.8819.90–23.6521.600.9118.32–23.4120.831.56
Depth of caudal peduncle10.3710.03–11.6110.650.378.58–10.8410.050.508.98–11.1510.430.60
Length of caudal peduncle20.7317.16–22. 3519.851.1418.64–22.0119.810.9115.19–20.1117.671.30
Dorsal-fin base length12.7112.27–16.1714.410.8911.75–15.2813.510.8010.46–14.3912.981.11
Anal-fin base length6.786.38–8.857.390.556.96–8.807.880.586.24–8.277.170.60
Pectoral-fin length17.3216.68–20.4618.430.8916.39–20.9618.380.9916.15–19.1617.861.01
Pelvic-fin length15.0514.24–16.9615.610.6813.85–18.0815.611.0813.58–16.2315.080.82
Length of the longest dorsal fin ray18.9014.92–21.5819.571.2716.42–21.2218.781.0616.35–21.5319.031.47
Mouth width8.657.48–9.778.630.516.49–8.897.870.576.51–9.388.10.73
In percent of head length
Head depth at eye56.8849.05–61.8754.212.7348.01–56.6367.012.2649.17–57.9765.473.96
Snout length38.3231.60–47.7038.082.6032.69–38.8935.551.6732.65–40.6136.182.41
Postorbital distance48.8333.82–51.8448.013.0147.66–56.5951.571.8946.58–54.8451.052.28
Interorbital width40.0434.62–42.8138.191.9833.88–41.4937.151.9330.90–40.1635.572.70
Eye diameter15.9715.07–23.5718.522.3613.91–24.4417.362.1111.95–26.1818.233.43
Maximum head width60.5351.75–66.8959.603.9957.83–69.6862.763.0447.38–59.0054.623.39
Barbel length15.1413.30–20.2016.251.6615.66–24.6019.712.2713.34–24.6418.112.73
Table 2.

Number of pectoral and pelvic fin rays in examined species.

Pectoral fin raysPelvic fin rays
131415161718192021227891011
Capoeta buhsei 2104621410
Capoeta coadi 61081171311416128
Capoeta mandica 172192
Capoeta saadii 312419101
Capoeta trutta 28178522171
Table 9.

Number of total gill rakers on the first gill arch in examined species.

12131415161718212223242526272831
Capoeta buhsei 10136
Capoeta coadi 171465
Capoeta mandica 22214
Capoeta saadii 196121
Capoeta trutta 1191175411
sp. n., ZM-CBSU Z190, holotype, 157 mm SL; Iran: Kohgiluyeh and Boyer Ahmad, Beshar River, Karun River drainage. sp. n., paratypes: a ZM-CBSU Z191; 157 mm SL b ZM-CBSU Z192, 148 mm SL; Iran: Kohgiluyeh and Boyer Ahmad, Beshar River, Karun River drainage. Live specimen of sp. n, Iran: Kohgiluyeh and Boyer Ahmad, Beshar River, Karun River drainage. Morphometric data of sp. n. (holotype ZM-CBSU Z190, and 33 paratypes), and . Dorsal-fin origin anterior to pelvic-fin origin, its outer margin usually straight to concave with 3–5 unbranched and 8–9 branched rays (3 and 8 in holotype, respectively); last unbranched dorsal-fin ray weakly to moderately ossified, flexible and soft at the tip, serrated in 1/2–2/3 of its length (Fig. 4); pectoral fins not extending to pelvic-fin base; their outer margins usually slightly convex with 16–22 rays in total (19 in holotype) (Table 2); pelvic fins not extending to anal fin base, their outer margin straight or slightly convex and blunt with 7–11 rays in total (8 in holotype) (Table 2); pelvic axillary scale present; anal fin with 3 unbranched and 5 branched rays, outer margin straight or slightly convex; caudal fin forked with 16–19 branched rays (17 in holotype) (Table 3), its tip pointed and its upper lobe often longer than lower one.
Figure 4.

Dorsal fins of sp. n. a ZM-CBSU J 444; 73 mm SL b ZM-CBSU Z195; 104 mm SL c ZM-CBSU Z192; 148 mm SL; Iran: Kohgiluyeh and Boyer Ahmad, Beshar River, Karun River drainage, to show size-dependent variability of the last simple dorsal-fin ray serration.

Table 3.

Number of branched caudal fin rays in examined species.

Branched caudal fin rays151617181920
Capoeta buhsei 3213
Capoeta saadii 12921
Capoeta mandica 281
Capoeta trutta 1916113
Dorsal fins of sp. n. a ZM-CBSU J 444; 73 mm SL b ZM-CBSU Z195; 104 mm SL c ZM-CBSU Z192; 148 mm SL; Iran: Kohgiluyeh and Boyer Ahmad, Beshar River, Karun River drainage, to show size-dependent variability of the last simple dorsal-fin ray serration. Number of pectoral and pelvic fin rays in examined species. Number of branched caudal fin rays in examined species. Scales small, total lateral-line scales 70–84; 12–17 scales between dorsal-fin origin and lateral line (Table 4); 9–11 scales between anal-fin origin and lateral line (Table 4); 26–32 circum-peduncle scales (Table 5); ventral midline and pectoral region covered with deeply embedded scales of reduced size; gill rakers slightly hooked, total gill rakers 14–18 (10–13 gill rakers on lower limb) of first gill arch (Table 8–9); 45–47 total vertebrae; usually one posterior pair of barbels present (very rarely two, 1 out of 51 individual); pharyngeal teeth arranged in 3 rows in the following manner: 2.3.5–5.3.2 and very similar in shape to those of ; teeth in the main row spatulate or spoon-shaped and crowns flat, narrow and curved.
Table 4.

Number of scales above (between dorsal-fin origin and lateral line) and below (between dorsal-fin origin and lateral line) lateral line in examined species.

Above lateral lineBelow lateral line
678910111213141516175678910111213
Capoeta buhsei 36412313731
Capoeta coadi 19915151112018
Capoeta mandica 110452
Capoeta saadii 12187124392
Capoeta trutta 21171673371986
Table 5.

Number of circum-pendicular scales in examined species.

1921222324252627282930313233
Capoeta buhsei 13255343
Capoeta coadi 311714475
Capoeta fusca 162411
Capoeta mandica 51311
Table 8.

Gill rakers on the lower limb of the first gill arch in studied species.

GR8910111213171819202224
Capoeta buhsei 2196
Capoeta coadi 191920
Capoeta mandica 123131
Number of scales above (between dorsal-fin origin and lateral line) and below (between dorsal-fin origin and lateral line) lateral line in examined species. Number of circum-pendicular scales in examined species. Coloration. Live specimens. Dorsum and sides bright golden-green or silvery, darker dorsally and lighter below the lateral line; dorsal head bright golden-green or light pink-brown; dorsal, anal and caudal fins beige to light brown with light pink to red tinge; pectoral and pelvic-fins beige to light brown or golden with brown tinge on the first few rays (Fig. 3); few large black blotches present on the body of some specimens whereas small diffuse black spots are present only on the body of some juveniles (above the lateral line).

Preserved specimens.

Dorsum, head and sides grey or brownish-grey dorsally and beige or yellow ventrally; dorsal and caudal fins dusky grey; pectoral, pelvic and anal fins white or beige with or without grey tinge; blotches and spots well discernible (Figs 1–2).

Sexual dimorphism.

Breeding tubercles present in both sexes, being bigger and more pronounced in males. Tubercles present on the sides of the snout but may also cover the entire body surface, on and above the lateral line with one or two tubercles per scale but not on each scale, below the lateral line especially in the area above the anal fin and on the branched anal-fin rays; tip of anal fin reaching to or beyond the vertical of the caudal-fin base in females and to about 2/3 of the caudal peduncle in males.

Habitat and distribution.

sp. n. occurs in medium-fast flowing rivers with usually gravel substrates and clear waters (Fig. 5). At the Beshar River sampling site, the river is about 25 m wide, with substrate consisting of coarse gravel and boulders, and fast-flowing and semi-transparent waters. The physicochemical parameters at the spot were: dissolved oxygen, 9.89 mg/L; total dissolved solids, 190.2 mg/L; salinity, 0.19‰; conductivity, 395 µs/cm; pH: 8.5 and water temperature 23.4 °C. It is known only from the Karun River drainage, a system that constitutes the southeastern part of the Tigris-Euphrates River system.
Figure 5.

Beshar River at Taleh Gah village, Karun River drainage, type locality of .

Beshar River at Taleh Gah village, Karun River drainage, type locality of .

Etymology.

The new species is named after Brian W. Coad, a well-known ichthyologist for his valuable contribution to the knowledge of freshwater fishes of Iran.

Comparative remarks.

The presence of one pair of barbels in sets the species apart from , , , , and , all of which have two pairs of barbels based on data from Turan et al. (2006a) and this study. The new species is further distinguished from by the presence of serrae on the last unbranched dorsal-fin ray (vs. absence) (Fig. 4), and by number of scales between dorsal-fin origin and lateral line (12–17 vs. 10–12 in ) PageBreak(Table 4), between anal-fin origin and lateral line (9–11 vs. 7), and by total number of the lateral-line scales (70–84 vs. 51–57) (Table 7). is distinguished from by number of scales between anal-fin origin and lateral line (9–11 vs. 8–9) (Table 4). Data for and are from Turan et al. (2006a).
Table 7.

Number of lateral-line scales in examined species.

5859616263646566676869707172737475767778798081828384858789
Capoeta buhsei 1312124312411
Capoeta coadi 212614415356511
Capoeta mandica 11212121
Capoeta saadii 121221231122
Capoeta trutta 1213154222532421
is distinguished from , , and by having 10–13 gill rakers on the lower limb of the first gill arch (vs. 17–24 in , 20–22 in and 18–25 in [data from Krupp 1985, Turan et al. 2008, Table 8]). The total number of gill rakers in specimens is 14–18 that is lower than in (23–27), (28–30), (25–30) and (21–31) [data from Turan et al. (2006b), Özuluğ and Freyhof (2008), and this study] Table 9. is further distinguished from by having fewer pectoral fin rays (16–22 vs. 13–16) (Table 2). is distinguished from , and by number of scales between dorsal-fin origin and lateral line (12–17 in vs. 8–10 in and 9–11 in ); number of scales between anal-fin origin and lateral line (9–11 in vs. 7–9 in , 6–10 in and 8–10 in ); total lateral line scales (70–84 in vs. 48–66 in and 52–60 in ) [data from Banarescu 1999, Turan et al. 2006b, Tables 4, 7]. In addition to the presence of serrae on the unbranched dorsal-fin ray, is set apart from by the number of scales between the dorsal-fin origin and lateral line (12–17 in vs. 10–13.5 PageBreakin ); scales between anal-fin origin and lateral line (9–11 in vs. 7–8 in ); circum-peduncular scales (26–32 in vs. 23–24 in ) (Tables 4–5) and probably vertebral counts (45–47 in vs. 44 in ) [data from Schöter et al. 2009]. Number of caudal-peduncle scales in examined species. Number of lateral-line scales in examined species. Gill rakers on the lower limb of the first gill arch in studied species. Number of total gill rakers on the first gill arch in examined species. It is distinguished from by having 11–13, modally 13, gill rakers on the lower limb of the first gill arch (vs. 12–18, modally 14–15) (Alwan 2011, Table 8). is clearly distinguished from by number of scales between dorsal-fin origin and lateral line (12–17 in vs. 9–10 in ); number of scales between anal-fin origin and lateral line (9–11 in vs. 6–7 in ) (Table 4); number of lateral line scales (70–84 in vs. 55–61 in [data from Turan et al. 2006b; Alwan 2011]. is distinguished from by total number of gill rakers (Table 9): 14–18 in vs. 19–28 in (see Karaman 1969; Turan et al. 2006b; Turan 2008). is distinguished from and by having a weaker, thinner and less ossified last unbranched dorsal-fin ray in juveniles and adults and fewer scales between dorsal-fin origin and lateral line (12–17 in vs. 18–22 in and 16–19 in [data from Özuluğ and Freyhof 2008, Küçük et al. 2009]). It is further distinguished from by the absence of spots on the body except in juveniles (vs. presence of many on the body [see Özuluğ and Freyhof 2008, Küçük et al. 2009]). is distinguished from by total number of lateral line scales (70–84 vs. 86–104), number of scales between dorsal-fin origin and lateral line (12–17 vs. 18–24), number of scales between anal-fin origin and lateral line (9–11 vs. 11.5–15.5), and circum-pendicular scales (26–32 vs. 32–39) (see Alwan 2011, Tables 4–7). Compared to other Iranian species of , has more scales and fewer gill rakers than (number of scales between dorsal-fin origin and lateral line: PageBreak12–17 vs. 6–10; number of scales between anal-fin origin and lateral line: 9–11 vs. 5–8; circum-peduncular scales: 26–32 vs. 13–23; total number of lateral line scales: 70–84 vs. 36–52; caudal peduncle scales: 14–18 vs. 10–12; gill rakers on the lower limb of the first gill arch: 10–13 vs. 15–18 [data from Coad and Krupp 1994] and this study (Tables 4–9)). is distinguished from by more total vertebrae (45–47 vs. 44), and more total lateral-line scales (70–84 vs. 40–62) (see Coad 2008, Johari et al. 2009). differs from its sister species (see Figs 6–7), in having more gill rakers on lower limb of first gill arch (10–13 vs. 8–10), more gill rakers on the whole first gill arch (14–18 vs. 12–14, see Tables 8–9) and by depth of caudal peduncle in percent of standard length (10.03–11.61 vs. 8.58–10.84). is distinguished from another closely related species, by having more scales below the lateral line (9–11 vs. 6–10, modally 9) (Table 4) and more circum-pendicular scales (26–32 vs. 23–28, modally 25–26) [data from Alwan (2011)].
Figure 6.

Bayesian tree inferred from cyt b. Numbers left of the slash, indicate the posterior probabilities of the Bayesian analysis, using MrBayes, while numbers right of the slash are the bootstrap support for 10,000 replicates in the Maximum Likelihood tree, using RaxML. Asterisks (*) indicate less than 50% Maximum Likelihood support for the node.

Figure 7.

Bayesian tree inferred from COI. Numbers left of the slash, indicate the posterior probabilities of the Bayesian analysis, using MrBayes, while numbers right of the slash are the bootstrap support for 10,000 replicates in the Maximum Likelihood tree, using RaxML. Asterisks (*) indicate less than 50% Maximum Likelihood support and (-) indicates less than 0.50 Bayesian posterior probabilities for the node.

Bayesian tree inferred from cyt b. Numbers left of the slash, indicate the posterior probabilities of the Bayesian analysis, using MrBayes, while numbers right of the slash are the bootstrap support for 10,000 replicates in the Maximum Likelihood tree, using RaxML. Asterisks (*) indicate less than 50% Maximum Likelihood support for the node. Bayesian tree inferred from COI. Numbers left of the slash, indicate the posterior probabilities of the Bayesian analysis, using MrBayes, while numbers right of the slash are the bootstrap support for 10,000 replicates in the Maximum Likelihood tree, using RaxML. Asterisks (*) indicate less than 50% Maximum Likelihood support and (-) indicates less than 0.50 Bayesian posterior probabilities for the node.

Molecular phylogenetic assessments

We generated COI barcode and cyt b sequences for a total of 76 and 61 specimens, respectively (Tables 10–11). Two phylogenetic approaches including Maximum Likelihood and Bayesian analyses for species of are given in Figs 6–7. Tables 12–13 provide the diagnostic nucleotide substitutions found in the mtDNA COI barcode region and cyt b, respectively.
Table 10.

List of species used for molecular analysis for cyt b (*present study, the ones without * are obtained from GenBank). was considered as outgroup.

SpeciesAccession NumberLocality
Capoeta aculeata JF798267 Stream Sangan, Karun River basin, Tigris basin, Iran
Capoeta aculeata JF798264 Sevah River, Kor basin, Iran
Capoeta aculeata JF798266 Beshar River, Karun basin, Tigris basin, Iran
Capoeta aculeata JF798265 Sevah River, Kor basin, Iran
Capoeta angorae JF798268 Pozanti River, Mediterranean Sea basin, Turkey
Capoeta antalyensis JF798269 Boga Cayi River, Mediterranean Sea basin, Turkey
Capoeta baliki JF798272 Kizilirmak River, Black Sea basin, Turkey
Capoeta baliki JF798273 Biggest tributary of Kurtbog˘azi dam lake, Sakarya River basin, Turkey
Capoeta baliki JF798275 Stream Cakirca, Lake Iznik basin, Turkey
Capoeta baliki GQ424019 Unknown
Capoeta baliki GQ424020 Unknown
Capoeta baliki JF798271 Kizilirmak River, Black Sea basin, Turkey
Capoeta banarescui GQ423987 Unknown
Capoeta banarescui GQ423988 Unknown
Capoeta bergamae JF798282 Bakacak stream, Marmara Sea basin, Turkey
Capoeta bergamae JF798280 Bakircay River, Turkey
Capoeta bergamae JF798281 Stream Guzelhisar, Aegean Sea basin, Turkey
Capoeta buhsei JF798283 Taghra Rud stream, Namak Lake basin, Iran
Capoeta buhsei* KU312369 Kordan River, Namak Lake basin, Karaj, Iran
Capoeta buhsei* KU312370 Kordan River, Namak Lake basin, Karaj, Iran
Capoeta caelestis JF798336 Ilica stream, Gulf of Antalya, Mediterranean Sea basin,Turkey
Capoeta caelestis JF798286 Goksu River, Mediterranean Sea basin, Turkey
Capoeta caelestis JF798287 Kargi Cayi River, Mediterranean Sea basin, Turkey
Capoeta coadi* KU564303 Beshar River, Tigris River basin, Iran
Capoeta coadi* KU564304 Beshar River, Tigris River basin, Iran
Capoeta coadi* KU564305 Beshar River, Tigris River basin, Iran
Capoeta coadi* KU564306 Beshar River, Tigris River basin, Iran
Capoeta damascina JF798309 Karadut River, Euphrates basin, Turkey
Capoeta damascina JF798303 Stream Arsuz, Iskenderun Gulf basin, Mediterranean Sea, Turkey
Capoeta damascina JF798308 Yocalti River, Turkey
Capoeta damascina JF798306 Spring Incesu, Orontes basin, Mediterranean Sea, Turkey
Capoeta damascina JF798307 Yocalti River, Mediterranean Sea basin, Turkey
Capoeta ekmekciae GQ424027 Unknown
Capoeta heratensis JF798319 Keltechinar River, Turkmenistan
Capoeta heratensis JF798318 Yanbash River, Turkmenistan
Capoeta heratensis JF798317 Yanbash River, Turkmenistan
Capoeta heratensis JF798316 Murgab River, Turkmenistan
Capoeta kosswigi JF798322 Deli Cayi River, Van Lake basin, Turkey
Capoeta kosswigi JF798323 Deli Cayi River, Van Lake basin, Turkey
Capoeta mandica * KU564307 Ghare Aghaj River, Mond River basin, Khaneh Zanian , Iran
Capoeta mandica * KU564308 Ghare Aghaj River, Mond River basin, Khaneh Zanian , Iran
Capoeta mandica * KU312375 Ghare Aghaj River, Mond River basin, Khaneh Zanian , Iran
Capoeta mauricii JF798325 Eflatum spring, Beysehir Lake basin, Turkey
Capoeta mauricii JF798324 Sarioz stream, Beysehir Lake basin, Turkey
Capoeta saadii* KU564309 Ghare Aghaj River, Mond River basin, Firuzabad, Iran
Capoeta saadii* KU564310 Ghare Aghaj River, Mond River basin, Firuzabad , Iran
Capoeta saadii* KU564311 Saadii Tomb Spring, Maharlu basin, Iran
Capoeta saadii* KU312373 Helleh River, Helleh basin, KohmarSorkhi, Iran
Capoeta saadii* KU564312 Kor River, Kor basin, Kamfirouz, Iran
Capoeta saadii* KU564313 Kor River, Kor basin, Kamfirouz, Iran
Capoeta saadii JF798326 Rodan River, Makran basin, Iran
Capoeta saadii JF798327 Spring Golabii, 35 km north from Darab, Hormuz basin, Iran
Capoeta sieboldii JF798329 Kizilirmak River, Black Sea basin, Turkey
Capoeta sieboldii JF798330 Kelkit Cayi River, Black Sea basin, Turkey
Capoeta tinca GQ424008 Unknown
Capoeta tinca GQ424007 Unknown
Capoeta trutta JF798334 Dez River, Karun River basin, Iran
Capoeta trutta JF798333 Sultansuyu River, Euphrates basin, Turkey
Capoeta trutta JF798332 Gelal River, Ab e Seymareh, Tigris River basin, Iran
Capoeta turani JF798335 Çatkit River, Mediterranean Sea basin, Turkey
Cyprinus carpio DQ868875 Unknown
Table 11.

List of species used for molecular analysis for COI (*present study, the ones without * are obtained from GenBank). was considered as outgroup.

SpeciesAccession num.Locality
Capoeta heratensis* KU564288 Gilas spring, Tedzen basin, Iran
Capoeta heratensis* KU564289 Gilas spring, Tedzen basin, Iran
Capoeta heratensis* KU564290 Gilas spring, Tedzen basin, Iran
Capoeta heratensis* KU564291 Bezangan Lake, Tedzen basin, Iran
Capoeta angorae KJ553074 Seyhan, Turkey
Capoeta angorae KJ552868 Seyhan, Turkey
Capoeta antalyensis KJ552850 Aksu, Turkey
Capoeta antalyensis KJ553025 Aksu, Turkey
Capoeta barroisi KJ553267 Orontes, Turkey
Capoeta barroisi KJ553245 Orontes, Turkey
Capoeta barroisi KJ552785 Orontes, Turkey
Capoeta barroisi KJ552810 Orontes, Turkey
Capoeta bergamae KJ553157 Bakir, Turkey
Capoeta bergamae KJ552877 Bakir, Turkey
Capoeta bergamae KJ553253 Biga, Turkey
Capoeta bergamae KJ553081 Biga, Turkey
Capoeta buhsei* KU312349 Kordan River, Namak Lake basin, Karaj, Iran
Capoeta buhsei* KU312350 Kordan River, Namak Lake basin, Karaj, Iran
Capoeta buhsei* KU564292 Roudbar River, Kavir basin,Iran
Capoeta buhsei* KU564293 Roudbar River, Kavir basin,Iran
Capoeta caelestis KJ552856 Göksu, Turkey
Capoeta caelestis KJ553237 Ilica, Turkey
Capoeta caelestis KJ553301 Göksu, Turkey
Capoeta caelestis KJ553030 Göksu, Turkey
Capoeta damascina KJ553080 Arsuz, Turkey
Capoeta damascina KJ553043 Orontes, Turkey
Capoeta damascina KJ552896 Orontes, Turkey
Capoeta damascina KJ553272 Orontes, Turkey
Capoeta damascina KJ552846 Orontes, Turkey
Capoeta damascina KJ552874 Ceyhan, Turkey
Capoeta damascina KJ552797 Orontes, Syria
Capoeta damascina KJ553202 Orontes, Syria
Capoeta damascina KJ553027 Ceyhan, Turkey
Capoeta damascina KJ553194 Ceyhan, Turkey
Capoeta damascina KJ552763 Ceyhan, Turkey
Capoeta damascina KJ552939 Jordan River Drainage, Syria
Capoeta damascina KJ553216 Orontes, Turkey
Capoeta damascina KJ553089 Orontes, Turkey
Capoeta erhani KJ552767 Ceyhan, Turkey
Capoeta erhani KJ552087 Ceyhan, Turkey
Capoeta erhani KJ552806 Ceyhan,Turkey
Capoeta erhani KJ553067 Ceyhan,Turkey
Capoeta mandica* KU564301 Ghare Aghaj River, Mond River basin, Khaneh Zanian, Iran
Capoeta mandica* KU564302 Ghare Aghaj River, Mond River basin, Khaneh Zanian, Iran
Capoeta mandica* KU312368 Ghare Aghaj River, Mond River basin, Khaneh Zanian, Iran
Capoeta pestai KJ553304 Egirdir, Turkey
Capoeta pestai KJ553138 Egirdir, Turkey
Capoeta pestai KJ552113 Egirdir, Turkey
Capoeta pestai KJ552841 Egirdir, Turkey
Capoeta pestai KJ552818 Egirdir, Turkey
Capoeta tinca KJ553229 Simav, Turkey
Capoeta tinca KJ553168 Simav, Turkey
Capoeta trutta* KU312352 Karkheh River, Tigris River basin, Seymareh, Iran
Capoeta trutta* KU312351 Gavi River, Tigris River basin, Illam, Iran
Capoeta turani KJ553224 Ceyhan Nehri, Turkey
Capoeta saadii* KU312358 Saadii Tomb Spring, Maharlou basin, Iran
Capoeta saadii* KU312395 Spring Pirbanoo, Maharlou basin, Iran
Capoeta saadii* KU312360 Helleh River, Helleh basin, KohmarSorkhi, Iran
Capoeta saadii* KU312361 Helleh River, Helleh basin, KohmarSorkhi, Iran
Capoeta saadii* KU564299 Kor River, Kor basin, Kamfiruz, Iran
Capoeta saadii* KU564300 Kor River, Kor basin, Kamfiruz, Iran
Capoeta saadii* KU312359 Kor River, Kor basin, Kamfiruz, Iran
Capoeta coadi* KU564294 Beshar River, Tigris River basin, Iran
Capoeta coadi* KU564295 Beshar River, Tigris River basin, Iran
Capoeta coadi* KU564296 Beshar River, Tigris River basin, Iran
Capoeta coadi* KU564297 Beshar River, Tigris River basin, Iran
Capoeta coadi* KU564298 Beshar River, Tigris River basin, Iran
Capoeta sp. KJ552935 Dalaman, Turkey
Capoeta sp. KJ553011 Büyük Menderes, Turkey
Capoeta sp. KJ552882 Dalaman, Turkey
Cyprinus carpio DQ868875 Unknown
Table 12.

Diagnostic nucleotide substitutions found in mtDNA COI barcode region of species. Nucleotide position relative to complete mitochondrial genome.

Species6545662066266665668367136749675867616770681868456875688769056986699570767088
Capoeta buhsei CAATGGTCGGGAACCGAGT
Capoeta caelestis TGCTGAGTGAACGTTGGGC
Capoeta coadi CAATAGTCGGGAACCAAGT
Capoeta damscina TAGTGAGTAAGCATTGGAC
Capoeta saadii TAACGGTCAAGAACCTAGT
Table 13.

Diagnostic nucleotide substitutions found in cyt b of species. Nucleotide position relative to complete mitochondrial genome.

Species154301545115457154631547215526155501561015670156821576015814159251601116027160391604516063
Capoeta buhsei CGTAAGGTGTGGGCCAGC
Capoeta caelestis TACAAGGAACAAGTTGAT
Capoeta coadi TGCAGGACGTGGGCCAGC
Capoeta damascina TACGAAATATGAACTGAT
Capoeta saadii TGCGAAATATGAACTGAT
List of species used for molecular analysis for cyt b (*present study, the ones without * are obtained from GenBank). was considered as outgroup. List of species used for molecular analysis for COI (*present study, the ones without * are obtained from GenBank). was considered as outgroup. Diagnostic nucleotide substitutions found in mtDNA COI barcode region of species. Nucleotide position relative to complete mitochondrial genome. Diagnostic nucleotide substitutions found in cyt b of species. Nucleotide position relative to complete mitochondrial genome. For inter-specific differences, the greatest pairwise genetic divergence between and its congeners was found to be 6.5 by and lowest by (0.4) for COI and greatest 9.7 by and lowest (1.5) by for cyt b (Tables 14–15).
Table 14.

Mean genetic distance for cyt b between species.

Capoeta sieboldii Capoeta caelestis Capoeta mauricii Capoeta bergamae Capoeta baliki Capoeta antalyensis Capoeta tinca Capoeta banarescui Capoeta turani Capoeta trutta Capoeta buhsei Capoeta coadi Capoeta mandica Capoeta saadii
Capoeta sieboldii
Capoeta caelestis 3.8
Capoeta mauricii 5.14.6
Capoeta bergamae 5.35.44.8
Capoeta baliki 4.44.74.55.7
Capoeta antalyensis 4.34.14.14.94.6
Capoeta tinca 5.35.65.36.61.05.6
Capoeta banarescui 5.74.94.96.04.94.44.9
Capoeta turani 8.18.49.39.58.58.68.811.0
Capoeta trutta 8.78.79.19.99.19.29.410.91.2
Capoeta buhsei 4.32.64.15.64.34.05.14.79.39.5
Capoeta coadi 4.22.64.56.05.04.35.85.49.49.61.5
Capoeta mandica 8.58.89.09.98.79.59.211.41.51.19.69.7
Capoeta saadii 4.83.34.84.64.74.85.45.88.58.92.82.79.1
Capoeta aculeata 6.56.67.27.77.46.58.07.59.29.26.87.09.76.8
Table 15.

Mean genetic distance for COI gene between species.

Capoeta trutta Capoeta heratensis Capoeta buhsei Capoeta coadi Capoeta saadii Capoeta pestai Capoeta caelestis Capoeta damascina Capoeta barroisi Capoeta bergamae Capoeta tinca Capoeta erhani Capoeta angorae Capoeta antalyensis Capoeta mauricii Capoeta mandica
Capoeta trutta
Capoeta heratensis 7.15
Capoeta buhsei 6.025.10
Capoeta coadi 6.015.230.44
Capoeta saadii 6.225.161.121.42
Capoeta pestai 5.825.073.833.603.82
Capoeta caelestis 6.034.542.613.102.884.01
Capoeta damascina 5.654.312.563.052.493.651.24
Capoeta barroisi 0.576.725.996.526.176.295.935.52
Capoeta bergamae 6.564.873.953.813.984.333.643.456.75
Capoeta tinca 4.395.324.504.774.495.024.444.014.214.47
Capoeta erhani 0.946.746.036.556.206.185.835.270.996.354.18
Capoeta angorae 6.374.683.283.413.023.971.910.746.273.784.465.97
Capoeta antalyensis 5.254.152.582.712.922.912.422.765.342.733.645.253.08
Capoeta mauricii 5.825.073.833.603.820.004.013.656.294.335.026.183.972.91
Capoeta mandica 0.427.316.226.346.395.996.205.830.736.544.581.186.545.435.99
Cyprinus carpio 15.3214.8915.1314.9714.2315.8516.3215.3915.5315.5715.4516.0615.3415.6115.8515.87
Mean genetic distance for cyt b between species. Mean genetic distance for COI gene between species. The two different phylogenetic analyses produced similar topologies. Both analyses produced a tree with 3 major clades (Figs 6–7). These included Clade I) , , , , , , , ( is a synonym [Alwan 2011]), , , , , , and , Clade II) , , and , and Clade III) , , , and . The Iranian members of the species complex, clustered together and formed the sister group to the other members in the complex. In these trees, samples of the , from Beshar River in Tigris River basin, form a well-supported monophyletic group, sister to in clade I.

Discussion

Based on morphological and molecular results, and are distinct species in the species complex group formerly known as in Iranian water bodies. Phylogenetic analyses recovered three main groups inside the genus : the Mesopotamian group ( group), the Anatolian-Iranian group ( group) and the Aralo-Caspian group ( group) which is in agreement with Levin et al. (2012). The genus is monophyletic (Levin et al. 2012). Based on the previous published data, the species complex group diverged from the group about 9.1 MYA (95% CI: 6.4–10.9) in the Tortonian period (Levin et al. 2012). Iranian members of the group (, and ) formed a clade sister to other species complex group members. The populations of from the Karun River drainage have long been considered as (Esmaeili et al. 2010). However, it has been proposed that might be restricted to the Damascus area in Syria. Most Iranian populations, referred to , including Karun River population have been considered as (Heckel, 1847) (Teimori et al. 2016). was originally described from Persepolis, Pulwar (Sivand) River, Kor River basin, Ruins, northeast of Shiraz, PageBreakPageBreakIran. It was considered as a synonym of (Esmaeili et al. 2010) and as a valid species by Bianco and Bănărescu (1982), by Levin et al. (2012) and by Teimori et al. (2016). Based on morphological and molecular results presented here, is a valid species closely related to (as proposed by Bianco and Bănărescu (1982) and to yet is diagnosed from these species and from (see Alwan 2011). is the least known species of the genus. It is not mentioned in the revision of the genus by Karaman (1969) who had no specimens available, but its position within the genus and its close phylogenetic relationship to and were demonstrated using many fresh specimens at our disposal, mostly from type localities.

Comparative materials used in morphological and molecular phylogenetic analyses

Morphological analyses

: ZM-CBSU Z218-229, 12, 104-149 mm SL; Iran, Semnan prov., Kavir basin, Hableh Rud at Garmsar, 35°18'06"N, 52°24'57"E. 21 August 2011. H.R. Esmaeili, G. Sayyadzadeh, A. Gholamifard, R. Zamaniannejad. ZM-CBSU Z260-274, 15, 88–130 mm SL; Iran, Albourz prov., Kordan River at Karaj, 35°57'12"N, 56°50'18"E. 5 July 2014. M. Masoudi, R. Khaefi. H.R. Mehraban. : ZM-CBSU Z197-211, 15, 50–78 mm SL; Iran, south Khorasan prov., Sharifabad Qanat at Birjand, 33°58'08"N, 59°17'03"E. 29 August 2011. H.R. Esmaeili, G. Sayyadzadeh, A. Gholamifard, R. Zamaniannejad. : ZM-CBSU Z230-234, 5, 82-130 mm SL; Iran, Fars prov., Qareh Aghaj River at Khaneh Zanian, 29°41'13"N, 52°05'58"E. 30 May 2015. H. Zareian, A. Gholamhosseini, G. Sayyadzadeh. ZM-CBSU Z212-217, 6, 83-118 mm SL; Iran, Fars prov., Qareh Aghaj River at Kavar, 29°10'55"N, 52°41'32"E. 27 February 2015. G. Sayyadzadeh, M. Masoudi. : ZM-CBSU Z136-146, 11, 78-121 mm SL; ZM-CBSU 2504, 1, 82 mm SL; ZM-CBSU 2508, 1, 69 mm SL; ZM-CBSU 2520-2521, 2, 51-62 mm SL; ZM-CBSU 2524-2528, 5, 113-231 mm SL; Iran, Fars prov., Ghadamgah spring, Doroodzan, 30°15'11"N, 54°25'32"E. 21 December 2003. H.R. Esmaeili, Biglari. : ZM-CBSU E100-123, 24, 50-149 mm SL; Iran, Kermanshah prov., Gamasiab River, 34°23'31"N, 47°42'57"E. 27 September 2007. A. Teimori, A. Gholamhosseini, M. Ebrahimi, A. Gholamifard; ZM-CBSU C453-463, 11, 67-177 mm SL; ZM-CBSU C474-477, 4, 67–75 mm SL; ZM-CBSU C481, 76 mm SL; all from Iran, Khuzestan prov., Maroon River at Aghajari, 30°44'52"N, 49°54'59"E. 21 March 2008. H. Zareian.

Molecular phylogenetic analyses

; ZM-CBSU M1299-1300, 2, Iran, Albourz prov., Kordan River at Karaj, 35°57'12"N, 56°50'18"E. 5 July 2014. M. Masoudi, R. Khaefi. H.R. Mehraban. GenBank accession number: (COI: KU312349, KU312350; cytb: KU312369, KU312370); ZM-CBSU M1289-1290, 2, Iran: Semnan Prov., Kavir basin, Roudbar River at Mehdishahr, 35°37'56"N, 53°20'41"E. 30 August 2011. H.R. Esmaeili et al., GenBank accession number: (COI: KU564292, KU564293). ; ZM-CBSU M813-815, 3, Iran, Razavi Khorasan prov., Gilas spring, 36°36'55"N, 59°20'17"E. 25 August 2011. H.R. Esmaeili et al. GenBank accession number: (COI: KU564288, KU564289, KU564290). ZM-CBSU M816, 1, Iran, Razavi Khorasan prov., Bezangan Lake, Tedzen basin. 36°17'03"N, 60°24'18"E. 25 August 2011. H.R. Esmaeili et al. GenBank accession number: (COI: KU564291). : ZM-CBSU M1433-1435, 3, Iran, Fars prov., Qareh Aghaj River at Khaneh Zanian, 29°41'13"N, 52°05'58"E. 30 May 2015. H. Zareian, A. Gholamhosseini, G. Sayyadzadeh. GenBank accession number: (COI: KU564301, KU564302, KU312368; cytb: KU564307, KU564308, KU312375). : ZM-CBSU M1426-1427, 2, Iran: Fars prov. Kor River, at Kamfirouz, 30°25'2"N, 52°8'59"E. H. Zareian. 24 October 2015. GenBank accession number: (COI: KU564299, KU564300; cytb: KU564312, KU564313). ZM-CBSU M1421, ZM-CBSU1422-1425, 3, Iran, Fars prov., Qareh Aghaj River at Firuzabad, 28°41'31"N, 52°27'43"E. 25 April 2015. H. Zareian. GenBank accession number: (cytb: KU564309, KU564310, KU564311). ZM-CBSU M157, 1, Iran, Fars prov., Shiraz, Saadii Tomb, Maharlou basin, 29°37.348'N, 52° 34.934'E. R. Khaefi, 2009. GenBank accession number: (COI: KU312358). ZM-CBSU M825, M831, 2, Iran, Fars prov., Helleh River, Helleh basin, KohmarhSorkhi, S. Mirgheiasi, S. Ghasemian. 29°23'39"N, 52°09'49"E. GenBank accession number: (COI: KU312361, KU312360; cytb: KU312373). ZM-CBSU M822, 1, Iran, Fars prov., Qareh Aghaj River at Firuzabad, 29°07'34"N, 52°51'24"E. GenBank accession number: (cytb: KU564310). FSJF DNA-18 Iran: Fars prov.: spring Pirbanoo about 10 km south of Shiraz, 29°31'08"N, 52°27'55"E GenBank accession number: (COI: KU312395). FSJF DNA-22; Iran: Fars prov.: River Kor about 73 km north of Shiraz, 30°11'37"N, 52°27'56"E. GenBank accession number: (COI: KU312359). : ZM-CBSU M583, 1, Iran: Ilam prov.; Gavi River at Mehran, H.R. Esmaeili, 13 November 2012, 33°39'18"N, 47°02'14"E. GenBank accession number: COI: KU312351; ZM-CBSU M593, 1, Iran, Ilam prov.; Seymareh River, H.R. Esmaeili, 13 November 2012, 33°38'17"N, 47°01'30"E. GenBank accession number: COI: KU312352.
Table 6.

Number of caudal-peduncle scales in examined species.

10111213141516171819202122
Capoeta buhsei 637911
Capoeta coadi 112815231
Capoeta mandica 4241
Capoeta saadii 211061
Capoeta trutta 11235148141
  9 in total

1.  Phylogeny and biogeography of the family Cyprinidae in the Middle East inferred from cytochrome b DNA- evolutionary significance of this region.

Authors:  J-D Durand; C S Tsigenopoulos; E Unlü; P Berrebi
Journal:  Mol Phylogenet Evol       Date:  2002-01       Impact factor: 4.286

2.  MRBAYES: Bayesian inference of phylogenetic trees.

Authors:  J P Huelsenbeck; F Ronquist
Journal:  Bioinformatics       Date:  2001-08       Impact factor: 6.937

3.  Phylogenetic relationships of the algae scraping cyprinid genus Capoeta (Teleostei: Cyprinidae).

Authors:  Boris A Levin; Jörg Freyhof; Zdeněk Lajbner; Silvia Perea; Asghar Abdoli; Muhammet Gaffaroğlu; Müfit Ozuluğ; Haikaz R Rubenyan; Vladimir B Salnikov; Ignacio Doadrio
Journal:  Mol Phylogenet Evol       Date:  2011-09-22       Impact factor: 4.286

4.  Evidence of a cenozoic Betic-Kabilian connection based on freshwater fish phylogeography (Luciobarbus, Cyprinidae).

Authors:  A Machordom; I Doadrio
Journal:  Mol Phylogenet Evol       Date:  2001-02       Impact factor: 4.286

5.  RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models.

Authors:  Alexandros Stamatakis
Journal:  Bioinformatics       Date:  2006-08-23       Impact factor: 6.937

6.  MODELTEST: testing the model of DNA substitution.

Authors:  D Posada; K A Crandall
Journal:  Bioinformatics       Date:  1998       Impact factor: 6.937

7.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

Authors:  Koichiro Tamura; Daniel Peterson; Nicholas Peterson; Glen Stecher; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2011-05-04       Impact factor: 16.240

8.  DNA barcoding Australia's fish species.

Authors:  Robert D Ward; Tyler S Zemlak; Bronwyn H Innes; Peter R Last; Paul D N Hebert
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2005-10-29       Impact factor: 6.237

9.  Molecular systematics of Xenocyprinae (teleostei: cyprinidae): taxonomy, biogeography, and coevolution of a special group restricted in East Asia.

Authors:  W Xiao; Y Zhang; H Liu
Journal:  Mol Phylogenet Evol       Date:  2001-02       Impact factor: 4.286

  9 in total
  5 in total

1.  Ichthyofauna From Iranian Freshwater: Annotated Checklist, Diagnosis, Taxonomy, Distribution and Conservation Assessment.

Authors:  Arash Jouladeh-Roudbar; Hamid Reza Ghanavi; Ignacio Doadrio
Journal:  Zool Stud       Date:  2020-06-29       Impact factor: 2.058

2.  Molecular Phylogeny and Zoogeography of the Capoeta damascina Species Complex (Pisces: Teleostei: Cyprinidae).

Authors:  Nisreen Alwan; Hamid-Reza Esmaeili; Friedhelm Krupp
Journal:  PLoS One       Date:  2016-06-16       Impact factor: 3.240

3.  Phylogenetic relationships of freshwater fishes of the genus Capoeta (Actinopterygii, Cyprinidae) in Iran.

Authors:  Hamid Reza Ghanavi; Elena G Gonzalez; Ignacio Doadrio
Journal:  Ecol Evol       Date:  2016-10-20       Impact factor: 2.912

4.  Possible species-flock scenario for the evolution of the cyprinid genus Capoeta (Cypriniformes: Cyprinidae) within late Neogene lake systems of the Armenian Highland.

Authors:  Anna Ayvazyan; Davit Vasilyan; Madelaine Böhme
Journal:  PLoS One       Date:  2019-05-08       Impact factor: 3.240

5.  A new species of the genus Capoeta Valenciennes, 1842 from the Caspian Sea basin in Iran (Teleostei, Cyprinidae).

Authors:  Arash Jouladeh-Roudbar; Soheil Eagderi; Hamid Reza Ghanavi; Ignacio Doadrio
Journal:  Zookeys       Date:  2017-07-05       Impact factor: 1.546

  5 in total

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