Literature DB >> 28048935

Engineered Diblock Polypeptides Improve DNA and Gold Solubility during Molecular Assembly.

Nicole A Estrich1, Armando Hernandez-Garcia2,3, Renko de Vries3, Thomas H LaBean1.   

Abstract

Programmed molecular recognition is being developed for the bionanofabrication of mixed organic/inorganic supramolecular assemblies for applications in electronics, photonics, and medicine. For example, DNA-based nanotechnology seeks to exploit the easily programmed complementary base-pairing of DNA to direct assembly of complex, designed nanostructures. Optimal solution conditions for bionanofabrication, mimicking those of biological systems, may involve high concentrations of biomacromolecules (proteins, nucleic acids, etc.) and significant concentrations of various ions (Mg2+, Na+, Cl-, etc.). Given a desire to assemble diverse inorganic components (metallic nanoparticles, quantum dots, carbon nanostructures, etc.), it will be increasingly difficult to find solution conditions simultaneously compatible with all components. Frequently, the use of chemical surfactants is undesirable, leaving a need for the development of alternative strategies. Herein, we discuss the use of artificial, diblock polypeptides in the role of solution compatibilizing agents for molecular assembly. We describe the use of two distinct diblock polypeptides with affinity for DNA in the stabilization of DNA origami and DNA-functionalized gold nanoparticles (spheres and rods) in solution, protection of DNA from enzymatic degradation, as well as two 3D tetrahedral DNA origamis. We present initial data showing that the diblock polypeptides promote the formation in the solution of desired organic/inorganic assemblies.

Entities:  

Keywords:  DNA nanotechnology; diblock polypeptide; directed self-assembly; molecular assembly; protein engineering; protein polymer; solution compatibilization

Mesh:

Substances:

Year:  2017        PMID: 28048935     DOI: 10.1021/acsnano.6b07291

Source DB:  PubMed          Journal:  ACS Nano        ISSN: 1936-0851            Impact factor:   15.881


  6 in total

Review 1.  Production of protein-based polymers in Pichia pastoris.

Authors:  Marc W T Werten; Gerrit Eggink; Martien A Cohen Stuart; Frits A de Wolf
Journal:  Biotechnol Adv       Date:  2019-03-19       Impact factor: 14.227

Review 2.  The biological applications of DNA nanomaterials: current challenges and future directions.

Authors:  Wenjuan Ma; Yuxi Zhan; Yuxin Zhang; Chenchen Mao; Xueping Xie; Yunfeng Lin
Journal:  Signal Transduct Target Ther       Date:  2021-10-08

Review 3.  Strategies to Build Hybrid Protein-DNA Nanostructures.

Authors:  Armando Hernandez-Garcia
Journal:  Nanomaterials (Basel)       Date:  2021-05-18       Impact factor: 5.076

4.  Binary control of enzymatic cleavage of DNA origami by structural antideterminants.

Authors:  Alex Stopar; Lucia Coral; Stefano Di Giacomo; Abimbola F Adedeji; Matteo Castronovo
Journal:  Nucleic Acids Res       Date:  2018-01-25       Impact factor: 16.971

5.  Force and Scale Dependence of the Elasticity of Self-Assembled DNA Bottle Brushes.

Authors:  Márcio Santos Rocha; Ingeborg M Storm; Raniella Falchetto Bazoni; Ésio Bessa Ramos; Armando Hernandez-Garcia; Martien A Cohen Stuart; Frans Leermakers; Renko de Vries
Journal:  Macromolecules       Date:  2017-12-28       Impact factor: 5.985

Review 6.  Structural stability of DNA origami nanostructures under application-specific conditions.

Authors:  Saminathan Ramakrishnan; Heini Ijäs; Veikko Linko; Adrian Keller
Journal:  Comput Struct Biotechnol J       Date:  2018-09-18       Impact factor: 7.271

  6 in total

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