Literature DB >> 28042675

1 H NMR-based metabolomics study for identifying urinary biomarkers and perturbed metabolic pathways associated with severity of IgA nephropathy: a pilot study.

Shiva Kalantari1, Mohsen Nafar1,2,3, Shiva Samavat2, Mahmoud Parvin4.   

Abstract

The severity of IgA nephropathy (IgAN), the most common primary glomerulonephritis, is judged on the basis of histologic and clinical features. A limited number of studies have considered molecular signature of IgAN for this issue, and no reliable biomarkers have been presented non-invasively for use in patient evaluations. This study aims to identify metabolite markers excreted in the urine and impaired pathways that are associated with a known marker of severity (proteinuria) to predict mild and severe stages of IgAN. Urine samples were analysed using nuclear magnetic resonance from biopsy-proven IgAN patients at mild and severe stages. Multivariate statistical analysis and pathway analysis were performed. The most changed metabolites were acetoacetate, hypotaurine, homocysteine, L-kynurenine and phenylalanine. Nine metabolites were positively correlated with proteinuria, including mesaconic acid, trans-cinnamic acid, fumaric acid, 5-thymidylic acid, anthranilic acid, indole, deoxyguanosine triphosphate, 13-cis-retinoic acid and nicotinamide riboside, while three metabolites were negatively correlated with proteinuria including acetoacetate, hypotaurine and hexanal. 'Phenylalanine metabolism' was the most significant pathway which was impaired in severe stage in comparison to mild stage of IgAN. This study indicates that nuclear magnetic resonance is a versatile technique that is capable of detecting metabolite biomarkers in combination with advanced multivariate statistical analysis.
Copyright © 2017 John Wiley & Sons, Ltd. Copyright © 2017 John Wiley & Sons, Ltd.

Entities:  

Keywords:  IgA nephropathy; metabolite biomarker; metabolomics; nuclear magnetic resonance; urine biomarker

Mesh:

Substances:

Year:  2017        PMID: 28042675     DOI: 10.1002/mrc.4573

Source DB:  PubMed          Journal:  Magn Reson Chem        ISSN: 0749-1581            Impact factor:   2.447


  10 in total

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Journal:  Sci Rep       Date:  2019-05-29       Impact factor: 4.379

4.  Metabolomics approach reveals urine biomarkers and pathways associated with the pathogenesis of lupus nephritis.

Authors:  Shiva Kalantari; Saeed Chashmniam; Mohsen Nafar; Zahra Zakeri; Mahmoud Parvin
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5.  Predicting and Defining Steroid Resistance in Pediatric Nephrotic Syndrome Using Plasma Metabolomics.

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7.  Network analysis of membranous glomerulonephritis based on metabolomics data.

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Review 8.  Chronic kidney disease: a review of proteomic and metabolomic approaches to membranous glomerulonephritis, focal segmental glomerulosclerosis, and IgA nephropathy biomarkers.

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Review 10.  How will artificial intelligence and bioinformatics change our understanding of IgA Nephropathy in the next decade?

Authors:  Roman David Bülow; Daniel Dimitrov; Peter Boor; Julio Saez-Rodriguez
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  10 in total

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