Literature DB >> 28041642

A Genome-wide Association Study Identifies Risk Alleles in Plasminogen and P4HA2 Associated with Giant Cell Arteritis.

F David Carmona1, Augusto Vaglio2, Sarah L Mackie3, José Hernández-Rodríguez4, Paul A Monach5, Santos Castañeda6, Roser Solans7, Inmaculada C Morado8, Javier Narváez9, Marc Ramentol-Sintas7, Colin T Pease3, Bhaskar Dasgupta10, Richard Watts11, Nader Khalidi12, Carol A Langford13, Steven Ytterberg14, Luigi Boiardi15, Lorenzo Beretta16, Marcello Govoni17, Giacomo Emmi18, Francesco Bonatti19, Marco A Cimmino20, Torsten Witte21, Thomas Neumann22, Julia Holle23, Verena Schönau24, Laurent Sailler25, Thomas Papo26, Julien Haroche27, Alfred Mahr28, Luc Mouthon29, Øyvind Molberg30, Andreas P Diamantopoulos31, Alexandre Voskuyl32, Elisabeth Brouwer33, Thomas Daikeler34, Christoph T Berger35, Eamonn S Molloy36, Lorraine O'Neill36, Daniel Blockmans37, Benedicte A Lie38, Paul Mclaren39, Timothy J Vyse40, Cisca Wijmenga41, Yannick Allanore42, Bobby P C Koeleman43, Jennifer H Barrett3, María C Cid4, Carlo Salvarani15, Peter A Merkel44, Ann W Morgan3, Miguel A González-Gay45, Javier Martín46.   

Abstract

Giant cell arteritis (GCA) is the most common form of vasculitis in individuals older than 50 years in Western countries. To shed light onto the genetic background influencing susceptibility for GCA, we performed a genome-wide association screening in a well-powered study cohort. After imputation, 1,844,133 genetic variants were analyzed in 2,134 case subjects and 9,125 unaffected individuals from ten independent populations of European ancestry. Our data confirmed HLA class II as the strongest associated region (independent signals: rs9268905, p = 1.94 × 10-54, per-allele OR = 1.79; and rs9275592, p = 1.14 × 10-40, OR = 2.08). Additionally, PLG and P4HA2 were identified as GCA risk genes at the genome-wide level of significance (rs4252134, p = 1.23 × 10-10, OR = 1.28; and rs128738, p = 4.60 × 10-9, OR = 1.32, respectively). Interestingly, we observed that the association peaks overlapped with different regulatory elements related to cell types and tissues involved in the pathophysiology of GCA. PLG and P4HA2 are involved in vascular remodelling and angiogenesis, suggesting a high relevance of these processes for the pathogenic mechanisms underlying this type of vasculitis.
Copyright © 2017 American Society of Human Genetics. Published by Elsevier Inc. All rights reserved.

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Year:  2016        PMID: 28041642      PMCID: PMC5223025          DOI: 10.1016/j.ajhg.2016.11.013

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  50 in total

1.  Genome-wide association study of systemic sclerosis identifies CD247 as a new susceptibility locus.

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Journal:  Nat Genet       Date:  2010-04-11       Impact factor: 38.330

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Authors:  Francisco David Carmona; Javier Martín; Miguel A González-Gay
Journal:  Curr Opin Rheumatol       Date:  2015-01       Impact factor: 5.006

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Authors:  Lindsey A Miles; Robert J Parmer
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4.  Genome-wide mRNA expression correlates of viral control in CD4+ T-cells from HIV-1-infected individuals.

Authors:  Margalida Rotger; Kristen K Dang; Jacques Fellay; Erin L Heinzen; Sheng Feng; Patrick Descombes; Kevin V Shianna; Dongliang Ge; Huldrych F Günthard; David B Goldstein; Amalio Telenti
Journal:  PLoS Pathog       Date:  2010-02-26       Impact factor: 6.823

Review 5.  Genetic component of giant cell arteritis.

Authors:  F David Carmona; Miguel A González-Gay; Javier Martín
Journal:  Rheumatology (Oxford)       Date:  2013-07-10       Impact factor: 7.580

6.  2012 revised International Chapel Hill Consensus Conference Nomenclature of Vasculitides.

Authors:  J C Jennette; R J Falk; P A Bacon; N Basu; M C Cid; F Ferrario; L F Flores-Suarez; W L Gross; L Guillevin; E C Hagen; G S Hoffman; D R Jayne; C G M Kallenberg; P Lamprecht; C A Langford; R A Luqmani; A D Mahr; E L Matteson; P A Merkel; S Ozen; C D Pusey; N Rasmussen; A J Rees; D G I Scott; U Specks; J H Stone; K Takahashi; R A Watts
Journal:  Arthritis Rheum       Date:  2013-01

7.  STRING v10: protein-protein interaction networks, integrated over the tree of life.

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Journal:  Nucleic Acids Res       Date:  2014-10-28       Impact factor: 16.971

8.  A global reference for human genetic variation.

Authors:  Adam Auton; Lisa D Brooks; Richard M Durbin; Erik P Garrison; Hyun Min Kang; Jan O Korbel; Jonathan L Marchini; Shane McCarthy; Gil A McVean; Gonçalo R Abecasis
Journal:  Nature       Date:  2015-10-01       Impact factor: 49.962

9.  Transcriptome and genome sequencing uncovers functional variation in humans.

Authors:  Tuuli Lappalainen; Michael Sammeth; Marc R Friedländer; Peter A C 't Hoen; Jean Monlong; Manuel A Rivas; Mar Gonzàlez-Porta; Natalja Kurbatova; Thasso Griebel; Pedro G Ferreira; Matthias Barann; Thomas Wieland; Liliana Greger; Maarten van Iterson; Jonas Almlöf; Paolo Ribeca; Irina Pulyakhina; Daniela Esser; Thomas Giger; Andrew Tikhonov; Marc Sultan; Gabrielle Bertier; Daniel G MacArthur; Monkol Lek; Esther Lizano; Henk P J Buermans; Ismael Padioleau; Thomas Schwarzmayr; Olof Karlberg; Halit Ongen; Helena Kilpinen; Sergi Beltran; Marta Gut; Katja Kahlem; Vyacheslav Amstislavskiy; Oliver Stegle; Matti Pirinen; Stephen B Montgomery; Peter Donnelly; Mark I McCarthy; Paul Flicek; Tim M Strom; Hans Lehrach; Stefan Schreiber; Ralf Sudbrak; Angel Carracedo; Stylianos E Antonarakis; Robert Häsler; Ann-Christine Syvänen; Gert-Jan van Ommen; Alvis Brazma; Thomas Meitinger; Philip Rosenstiel; Roderic Guigó; Ivo G Gut; Xavier Estivill; Emmanouil T Dermitzakis
Journal:  Nature       Date:  2013-09-15       Impact factor: 49.962

10.  Analysis of Plasminogen Genetic Variants in Multiple Sclerosis Patients.

Authors:  A Dessa Sadovnick; Anthony L Traboulsee; Cecily Q Bernales; Jay P Ross; Amanda L Forwell; Irene M Yee; Lena Guillot-Noel; Bertrand Fontaine; Isabelle Cournu-Rebeix; Antonio Alcina; Maria Fedetz; Guillermo Izquierdo; Fuencisla Matesanz; Kelly Hilven; Bénédicte Dubois; An Goris; Ianire Astobiza; Iraide Alloza; Alfredo Antigüedad; Koen Vandenbroeck; Denis A Akkad; Orhan Aktas; Paul Blaschke; Mathias Buttmann; Andrew Chan; Joerg T Epplen; Lisa-Ann Gerdes; Antje Kroner; Christian Kubisch; Tania Kümpfel; Peter Lohse; Peter Rieckmann; Uwe K Zettl; Frauke Zipp; Lars Bertram; Christina M Lill; Oscar Fernandez; Patricia Urbaneja; Laura Leyva; Jose Carlos Alvarez-Cermeño; Rafael Arroyo; Aroa M Garagorri; Angel García-Martínez; Luisa M Villar; Elena Urcelay; Sunny Malhotra; Xavier Montalban; Manuel Comabella; Thomas Berger; Franz Fazekas; Markus Reindl; Mascha C Schmied; Alexander Zimprich; Carles Vilariño-Güell
Journal:  G3 (Bethesda)       Date:  2016-07-07       Impact factor: 3.154

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  16 in total

1.  Inhibition of JAK-STAT Signaling Suppresses Pathogenic Immune Responses in Medium and Large Vessel Vasculitis.

Authors:  Hui Zhang; Ryu Watanabe; Gerald J Berry; Lu Tian; Jörg J Goronzy; Cornelia M Weyand
Journal:  Circulation       Date:  2017-12-18       Impact factor: 29.690

Review 2.  Giant Cell Arteritis: Practical Pearls and Updates.

Authors:  Swati Pradeep; Jonathan H Smith
Journal:  Curr Pain Headache Rep       Date:  2018-01-17

Review 3.  Vasculitogenic T Cells in Large Vessel Vasculitis.

Authors:  Ryu Watanabe; Motomu Hashimoto
Journal:  Front Immunol       Date:  2022-06-15       Impact factor: 8.786

Review 4.  Large-vessel vasculitis.

Authors:  Dan Pugh; Maira Karabayas; Neil Basu; Maria C Cid; Ruchika Goel; Carl S Goodyear; Peter C Grayson; Stephen P McAdoo; Justin C Mason; Catherine Owen; Cornelia M Weyand; Taryn Youngstein; Neeraj Dhaun
Journal:  Nat Rev Dis Primers       Date:  2022-01-06       Impact factor: 65.038

5.  Patterns of Arterial Disease in Takayasu Arteritis and Giant Cell Arteritis.

Authors:  K Bates Gribbons; Cristina Ponte; Simon Carette; Anthea Craven; David Cuthbertson; Gary S Hoffman; Nader A Khalidi; Curry L Koening; Carol A Langford; Kathleen Maksimowicz-McKinnon; Carol A McAlear; Paul A Monach; Larry W Moreland; Christian Pagnoux; Kaitlin A Quinn; Joanna C Robson; Philip Seo; Antoine G Sreih; Ravi Suppiah; Kenneth J Warrington; Steven R Ytterberg; Raashid Luqmani; Richard Watts; Peter A Merkel; Peter C Grayson
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Review 6.  Langerhans Cells: Sensing the Environment in Health and Disease.

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Journal:  Front Immunol       Date:  2018-02-01       Impact factor: 7.561

7.  Geo-epidemiology of temporal artery biopsy-positive giant cell arteritis in Australia and New Zealand: is there a seasonal influence?

Authors:  Elisabeth De Smit; Linda Clarke; Paul G Sanfilippo; Tony R Merriman; Matthew A Brown; Catherine L Hill; Alex W Hewitt
Journal:  RMD Open       Date:  2017-08-29

Review 8.  Leveraging Genetic Findings for Precision Medicine in Vasculitis.

Authors:  Marialbert Acosta-Herrera; Miguel A González-Gay; Javier Martín; Ana Márquez
Journal:  Front Immunol       Date:  2019-08-02       Impact factor: 7.561

Review 9.  Current State of Precision Medicine in Primary Systemic Vasculitides.

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Journal:  Front Immunol       Date:  2019-12-17       Impact factor: 7.561

Review 10.  Cellular Signaling Pathways in Medium and Large Vessel Vasculitis.

Authors:  Ryu Watanabe; Gerald J Berry; David H Liang; Jörg J Goronzy; Cornelia M Weyand
Journal:  Front Immunol       Date:  2020-09-25       Impact factor: 7.561

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