Literature DB >> 28039977

Counting forbidden patterns in irregularly sampled time series. II. Reliability in the presence of highly irregular sampling.

Konstantinos Sakellariou1, Michael McCullough1, Thomas Stemler1, Michael Small1.   

Abstract

We are motivated by real-world data that exhibit severe sampling irregularities such as geological or paleoclimate measurements. Counting forbidden patterns has been shown to be a powerful tool towards the detection of determinism in noisy time series. They constitute a set of ordinal symbolic patterns that cannot be realised in time series generated by deterministic systems. The reliability of the estimator of the relative count of forbidden patterns from irregularly sampled data has been explored in two recent studies. In this paper, we explore highly irregular sampling frequency schemes. Using numerically generated data, we examine the reliability of the estimator when the sampling period has been drawn from exponential, Pareto and Gamma distributions of varying skewness. Our investigations demonstrate that some statistical properties of the sampling distribution are useful heuristics for assessing the estimator's reliability. We find that sampling in the presence of large chronological gaps can still yield relatively accurate estimates as long as the time series contains sufficiently many densely sampled areas. Furthermore, we show that the reliability of the estimator of forbidden patterns is poor when there is a high number of sampling intervals, which are larger than a typical correlation time of the underlying system.

Year:  2016        PMID: 28039977     DOI: 10.1063/1.4970483

Source DB:  PubMed          Journal:  Chaos        ISSN: 1054-1500            Impact factor:   3.642


  3 in total

1.  Macrophages use a bet-hedging strategy for antimicrobial activity in phagolysosomal acidification.

Authors:  Quigly Dragotakes; Kaitlin M Stouffer; Man Shun Fu; Yehonatan Sella; Christine Youn; Olivia Insun Yoon; Carlos M De Leon-Rodriguez; Joudeh B Freij; Aviv Bergman; Arturo Casadevall
Journal:  J Clin Invest       Date:  2020-07-01       Impact factor: 14.808

2.  Constructing ordinal partition transition networks from multivariate time series.

Authors:  Jiayang Zhang; Jie Zhou; Ming Tang; Heng Guo; Michael Small; Yong Zou
Journal:  Sci Rep       Date:  2017-08-10       Impact factor: 4.379

3.  Anomaly Detection in Paleoclimate Records Using Permutation Entropy.

Authors:  Joshua Garland; Tyler R Jones; Michael Neuder; Valerie Morris; James W C White; Elizabeth Bradley
Journal:  Entropy (Basel)       Date:  2018-12-05       Impact factor: 2.524

  3 in total

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