Literature DB >> 28039600

Local-scale spatial structure and community composition of orchid mycorrhizal fungi in semi-natural grasslands.

Jane Oja1, Johanna Vahtra2, Mohammad Bahram2,3, Petr Kohout2,4,5, Tiiu Kull6, Riinu Rannap7, Urmas Kõljalg2, Leho Tedersoo2.   

Abstract

Orchid mycorrhizal (OrM) fungi play a crucial role in the ontogeny of orchids, yet little is known about how the structure of OrM fungal communities varies with space and environmental factors. Previous studies suggest that within orchid patches, the distance to adult orchids may affect the abundance of OrM fungi. Many orchid species grow in species-rich temperate semi-natural grasslands, the persistence of which depends on moderate physical disturbances, such as grazing and mowing. The aim of this study was to test whether the diversity, structure and composition of OrM fungal community are influenced by the orchid patches and management intensity in semi-natural grasslands. We detected putative OrM fungi from 0 to 32 m away from the patches of host orchid species (Orchis militaris and Platanthera chlorantha) in 21 semi-natural calcareous grasslands using pyrosequencing. In addition, we assessed different ecological conditions in semi-natural grasslands but primarily focused on the effect of grazing intensity on OrM fungal communities in soil. We found that investigated orchid species were mostly associated with Ceratobasidiaceae and Tulasnellaceae and, to a lesser extent, with Sebacinales. Of all the examined factors, the intensity of grazing explained the largest proportion of variation in OrM fungal as well as total fungal community composition in soil. Spatial analyses showed limited evidence for spatial clustering of OrM fungi and their dependence on host orchids. Our results indicate that habitat management can shape OrM fungal communities, and the spatial distribution of these fungi appears to be weakly structured outside the orchid patches.

Entities:  

Keywords:  Calcareous grassland; Fungal community composition; Grazing intensity; Next-generation sequencing; Orchid mycorrhiza; Spatial distribution

Mesh:

Year:  2016        PMID: 28039600     DOI: 10.1007/s00572-016-0755-7

Source DB:  PubMed          Journal:  Mycorrhiza        ISSN: 0940-6360            Impact factor:   3.387


  52 in total

1.  Mycorrhizal interactions of orchids colonizing Estonian mine tailings hills.

Authors:  Richard P Shefferson; Tiiu Kull; Kadri Tali
Journal:  Am J Bot       Date:  2008-02       Impact factor: 3.844

2.  Changing partners in the dark: isotopic and molecular evidence of ectomycorrhizal liaisons between forest orchids and trees.

Authors:  Martin I Bidartondo; Bastian Burghardt; Gerhard Gebauer; Thomas D Bruns; David J Read
Journal:  Proc Biol Sci       Date:  2004-09-07       Impact factor: 5.349

3.  454 Pyrosequencing and Sanger sequencing of tropical mycorrhizal fungi provide similar results but reveal substantial methodological biases.

Authors:  Leho Tedersoo; R Henrik Nilsson; Kessy Abarenkov; Teele Jairus; Ave Sadam; Irja Saar; Mohammad Bahram; Eneke Bechem; George Chuyong; Urmas Kõljalg
Journal:  New Phytol       Date:  2010-07-15       Impact factor: 10.151

Review 4.  Conceptual synthesis in community ecology.

Authors:  Mark Vellend
Journal:  Q Rev Biol       Date:  2010-06       Impact factor: 4.875

5.  Slow response of plant species richness to habitat loss and fragmentation.

Authors:  Aveliina Helm; Ilkka Hanski; Meelis Pärtel
Journal:  Ecol Lett       Date:  2006-01       Impact factor: 9.492

6.  Coexisting orchid species have distinct mycorrhizal communities and display strong spatial segregation.

Authors:  Hans Jacquemyn; Rein Brys; Vincent S F T Merckx; Michael Waud; Bart Lievens; Thorsten Wiegand
Journal:  New Phytol       Date:  2013-12-11       Impact factor: 10.151

7.  From extensive clone libraries to comprehensive DNA arrays for the efficient and simultaneous detection and identification of orchid mycorrhizal fungi.

Authors:  Bart Lievens; Stefan van Kerckhove; Annelies Justé; Bruno P A Cammue; Olivier Honnay; Hans Jacquemyn
Journal:  J Microbiol Methods       Date:  2009-11-13       Impact factor: 2.363

8.  Mutualistic mycorrhiza in orchids: evidence from plant-fungus carbon and nitrogen transfers in the green-leaved terrestrial orchid Goodyera repens.

Authors:  Duncan D Cameron; Jonathan R Leake; David J Read
Journal:  New Phytol       Date:  2006       Impact factor: 10.151

9.  Analysis of network architecture reveals phylogenetic constraints on mycorrhizal specificity in the genus Orchis (Orchidaceae).

Authors:  Hans Jacquemyn; Vincent Merckx; Rein Brys; Daniel Tyteca; Bruno P A Cammue; Olivier Honnay; Bart Lievens
Journal:  New Phytol       Date:  2011-06-13       Impact factor: 10.151

10.  CD-HIT: accelerated for clustering the next-generation sequencing data.

Authors:  Limin Fu; Beifang Niu; Zhengwei Zhu; Sitao Wu; Weizhong Li
Journal:  Bioinformatics       Date:  2012-10-11       Impact factor: 6.937

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  4 in total

1.  Host population size is linked to orchid mycorrhizal fungal communities in roots and soil, which are shaped by microenvironment.

Authors:  Jaspreet Kaur; Caleb Phillips; Jyotsna Sharma
Journal:  Mycorrhiza       Date:  2020-10-28       Impact factor: 3.387

2.  In situ Orchid Seedling-Trap Experiment Shows Few Keystone and Many Randomly Associated Mycorrhizal Fungal Species During Early Plant Colonization.

Authors:  Stefania Cevallos; Stéphane Declerck; Juan Pablo Suárez
Journal:  Front Plant Sci       Date:  2018-11-16       Impact factor: 5.753

3.  Protocorm-Supporting Fungi Are Retained in Roots of Mature Tipularia discolor Orchids as Mycorrhizal Fungal Diversity Increases.

Authors:  Melissa McCormick; Robert Burnett; Dennis Whigham
Journal:  Plants (Basel)       Date:  2021-06-20

Review 4.  Current Insight into Traditional and Modern Methods in Fungal Diversity Estimates.

Authors:  Ajay Kumar Gautam; Rajnish Kumar Verma; Shubhi Avasthi; Yogita Bohra; Bandarupalli Devadatha; Mekala Niranjan; Nakarin Suwannarach
Journal:  J Fungi (Basel)       Date:  2022-02-24
  4 in total

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