| Literature DB >> 28036326 |
Tao Xu1,2, Zhichao Jin1, Yuan Yuan1,3, Honggang Zheng1, Conghuang Li1, Wei Hou1, Qiujun Guo1,3, Baojin Hua1.
Abstract
BACKGROUND: Tat-interacting protein 30 (TIP30) is a tumor suppressor protein that has been found to be expressed in a wide variety of tumor tissues. TIP30 is involved in the control of cell apoptosis, growth, metastasis, angiogenesis, DNA repair, and tumor cell metabolism. The methylation of the TIP30 promoter is also associated with tumor prognosis. To evaluate this topic further, we conducted a systematic meta-analysis to explore the clinicopathological and prognostic significance of TIP30 for tumor patients.Entities:
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Year: 2016 PMID: 28036326 PMCID: PMC5201241 DOI: 10.1371/journal.pone.0168408
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1Flow diagram of the literature search process.
Characteristics of the included studies.
| Study | Year | Region | Sample size (n) | No. of TIP30 high expression/promoter methylation(%) | Tumor type | TNM stage | Methods of TIP30 identification | Cut-off | Clinical pathological information | Outcome measures | Survival analysis |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Bu F[ | 2014 | China | 137 | 68(49.6%) | Esophageal carcinoma | I-IV | IHC | ≥20% | TNM clinical stage, Pathological grade, Lymph node metastasis, Distant metastases, Degree of invasion | OS | Univariate |
| Chen J[ | 2015 | China | 105 | 49(46.7%) | Laryngeal carcinoma | I-IV | IHC | ≥10% | TNM clinical stage, Pathological grade, Lymph node metastasis | OS, DFS | Multivariate |
| Dong X[ | 2015 | China | Expression 50 Methylation 40 | Expression 31(62%) Methylation 24(60%) | Glioma | I-IV | IHC/MS-PCR | ≥25% | TNM clinical stage | OS | Univariate |
| Guo S[ | 2013 | China | 106 | 54(50.9%) | Pancreatic ductal adenocarcinoma | I-III | IHC | ≥25% | Pathological grade, Degree of invasion, Lymph node metastasis, Neural invasion | OS, RFS | Multivariate |
| Hu Y[ | 2015 | China | 92 | 50(%) | Glioma | I-IV | IHC | ≥10% | TNM clinical stage | OS | Multivariate |
| Huang Q[ | 2011 | China | 112 | 50(44.6%) | Breast cancer | I-III | IHC | ≥10% | TNM clinical stage, Lymph node metastasis | OS | Univariate |
| Li X[ | 2009 | China | 106 | 51(%) | Gastric cancer | I-IV | IHC | ≥25% | Pathologic grade, TNM clinical stage | OS | Univariate |
| Liu B[ | 2008 | China | 52 | Methylation 22(%) | Hepatocellular carcinoma | Unclear | MS-PCR | Unclear | AFP level, HBV positive | OS, DFS | Univariate |
| Liu D[ | 2011 | China | 108 | 54(50%) | Gallbladder adenocarcinoma | Unclear | IHC | ≥25% | Pathological grade, Lymph node metastasis, Local infiltration | OS | Multivariate |
| Wang W[ | 2014 | China | 297 | 149(%) | Hepatocellular carcinoma | I-IIIA | IHC | Unclear | TNM clinical stage, Pathological grade, Vascular invasion, Intrahepatic metastasis | OS, RFS | Multivariate |
| Zhu M[ | 2014 | China | 105 | 59(56.2%) | Laryngeal carcinoma | I-IV | IHC | ≥25% | TNM clinical stage, Pathological grade, Lymph node metastasis, Degree of invasion | OS, RFS | Multivariate |
| Zhu M[ | 2015 | China | 151 | 92(60.9%) | Hepatocellular carcinoma | I-IV | IHC | ≥25% | TNM clinical stage, Lymphovascular invasion, AFP, Hepatocirrhosis | OS, RFS | Multivariate |
| Tong X[ | 2009 | China | 197 | 125(%) | Lung cancer | I-IV | IHC | ≥25% | TNM clinical stage, Pathological grade, Lymph node metastasis | - | - |
| Zhao J[ | 2006 | China | 87 | 45(52%) | Breast cancer | Unclear | IHC | ≥1% | Vascular invasion, Lymph node metastasis, Tumor differentiation | - | - |
a. MS-PCR: Methylation-specific polymerase chain reaction
b. OS: Overall survival; DFS: Disease-free survival; RFS: Recurrence-free survival.
Quality assessment of the included studies.
| Scientific design | Laboratory methodology | Generalizability | Results analysis | Total score (%) | |
|---|---|---|---|---|---|
| Bu F | 8 | 9 | 5 | 4 | 59.09 |
| Chen J | 8 | 9 | 8 | 6 | 70.45 |
| Dong X | 8 | 10 | 5 | 5 | 63.64 |
| Guo S | 8 | 12 | 8 | 7 | 79.55 |
| Huang Q | 8 | 8 | 8 | 5 | 65.91 |
| Li X | 8 | 11 | 4 | 4 | 61.36 |
| Liu B | 8 | 10 | 4 | 5 | 64.29 |
| Liu D | 8 | 9 | 5 | 6 | 63.64 |
| Wang W | 8 | 10 | 8 | 7 | 75.00 |
| Zhu M (2014) | 8 | 11 | 5 | 7 | 70.45 |
| Zhu M (2015) | 8 | 8 | 5 | 7 | 63.64 |
| Hu Y | 8 | 9 | 8 | 6 | 70.45 |
| Tong X | 6 | 8 | 4 | 0 | 40.91 |
| Zhao J | 6 | 8 | 5 | 0 | 43.18 |
Fig 2Forest plot of hazard ratios (HRs) of OS in the random-effect model.
The HR of the overall survival time of TIP30-high expression cancer patients was compared with TIP30-low expression cancer patients. Each individual study is represented by a red square, and the pooled datasets are indicated by a diamond, representing the 95% confidence interval (CI) of each study. A HR < 1 implies a better survival for the cancer patients. The size of each study represents the weighting factor (1/standard error [SE]) assigned to it.
Fig 3Forest plot of hazard ratios (HRs) of OS in the random-effect model.
The HR of overall survival time of TIP30 promoter methylated cancer patients was compared with TIP30 promoter unmethylated cancer patients. A HR = 0.99 implies no significant differences in OS for methylation of the TIP30 promoter.
Fig 4Forest plot of hazard ratios (HRs) of RFS/DFS in the random-effect model.
The HR of recurrent free survival or disease free survival of TIP30-high expression cancer patients was compared with TIP30-low expression cancer patients. An HR<1 implied a better RFS/DFS for the cancer patients.
Fig 5Forest plot of hazard ratios (HRs) of RFS/DFS in the random-effect model.
The HR of RFS/DFS was compared within TIP30 expression and promoter methylation subgroups. An HR<1 implied a better RFS/DFS for the cancer patients.
Results of the subgroup analysis of the included studies.
| Study subgroups | No. of studies | No. of patients | Fixed | Pooled HR [95% CI] | P value | Heterogeneity | Meta-regression P value | ||
|---|---|---|---|---|---|---|---|---|---|
| P value | Random | I2 (%) | P value | ||||||
| Tumor types | 0.012 | ||||||||
| glioma | 2 | 142 | 0.56 [0.36, 0.85] | 0.007 | 0.50 [0.23, 1.11] | 0.09 | 67 | 0.08 | |
| laryngeal carcinoma | 2 | 210 | 0.38 [0.23, 0.65] | 0.0004 | 0.38 [0.23, 0.65] | 0.004 | 0 | 0.60 | |
| esophageal carcinoma | 1 | 137 | 0.50 [0.29, 0.86] | 0.01 | 0.50 [0.29, 0.86] | 0.01 | Not applicable | ||
| pancreatic carcinoma | 1 | 106 | 0.60 [0.39, 0.92] | 0.02 | 0.60 [0.39, 0.92] | 0.02 | Not applicable | ||
| breast cancer | 1 | 112 | 0.71 [0.37, 1.36] | 0.30 | 0.71 [0.37, 1.36] | 0.30 | Not applicable | ||
| gastric cancer | 1 | 106 | 0.18 [0.05, 0.65] | 0.009 | 0.18 [0.05, 0.65] | 0.009 | Not applicable | ||
| hepatocellular cancer | 2 | 203 | 0.82 [0.75, 0.91] | 0.0001 | 0.72 [0.48, 1.08] | 0.11 | 69 | 0.07 | |
| gallbladder cancer | 1 | 108 | 0.40 [0.23, 0.70] | 0.001 | 0.40 [0.23, 0.70] | 0.001 | Not applicable | ||
| Quality score (%) | 0.895 | ||||||||
| ≥65 | 6 | 817 | 0.80 [0.73, 0.88] | <0.00001 | 0.65 [0.50, 0.85] | 0.002 | 52 | 0.06 | |
| <65 | 5 | 604 | 0.44 [0.34, 0.58] | <0.00001 | 0.44 [0.34, 0.58] | <0.00001 | 0 | 0.43 | |
| Survival analysis | 0.043 | ||||||||
| Univariate | 5 | 556 | 0.50 [0.38, 0.65] | <0.00001 | 0.49 [0.35, 0.67] | <0.0001 | 21 | 0.28 | |
| Multivariate | 6 | 865 | 0.79 [0.71, 0.86] | <0.00001 | 0.58 [0.41, 0.80] | 0.0009 | 69 | 0.006 | |
| Cut-off | 0.003 | ||||||||
| ≥25% | 6 | 626 | 0.46 [0.36, 0.59] | <0.00001 | 0.45 [0.34, 0.59] | <0.00001 | 16 | 0.31 | |
| Other values | 5 | 743 | 0.81 [0.74, 0.89] | <0.0001 | 0.70 [0.55, 0.90] | 0.005 | 38 | 0.17 | |
| Sample size (n) | 0.960 | ||||||||
| ≥110 | 4 | 697 | 0.81 [0.73, 0.89] | <0.0001 | 0.68 [0.51, 0.91] | 0.01 | 54 | 0.09 | |
| <110 | 7 | 724 | 0.48 [0.38, 0.61] | <0.00001 | 0.46 [0.35, 0.61] | <0.00001 | 26 | 0.23 | |
Meta-analysis of TIP30 and the clinical and pathological features of patients with tumor.
| Clinical and pathological features | No. of studies | No. of patients | Pooled OR [95% CI] | Heterogeneity | ||||
|---|---|---|---|---|---|---|---|---|
| Fixed | P value | Random | P value | I2 (%) | P value | |||
| III/IV clinical stage | 10 | 1351 | 2.10 [1.68, 2.62] | <0.00001 | 2.17 [1.62, 2.89] | <0.00001 | 34 | 0.13 |
| Lymph node metastasis | 8 | 959 | 3.51 [2.67, 4.63] | <0.00001 | 3.90 [2.21, 6.89] | <0.00001 | 74 | 0.0004 |
| Poor differentiation | 8 | 1142 | 1.48 [1.14, 1.91] | 0.003 | 1.49 [0.87, 2.56] | 0.14 | 73 | 0.0005 |
| Vascular tumor thrombus | 4 | 641 | 1.96 [1.39, 2.76] | 0.0001 | 2.04 [0.57, 7.33] | 0.27 | 88 | <0.0001 |
| T3/4 invasion | 4 | 456 | 1.60 [1.08, 2.37] | 0.02 | 1.62 [0.80, 3.29] | 0.18 | 67 | 0.03 |
Fig 6Texts of publication bias.
The Test is based on a linear regression of the standard normal deviate against its precision. In our analysis, we used the inverse of the standard error as the independent variable and the standardized estimate of the size effect (log HR upon its standard error) as the dependent variable. The estimate of the effect is considered biased if the intercept is significantly different from zero. Figures: A. Funnel plot; B. Trim and fill method; C. Egger’s text; D. Begg’s test.