Literature DB >> 28036115

Development and validation of a real-time reverse transcriptase PCR assay for sensitive detection of SFTSV.

Peibin Zeng1, Zhendong Yang2, Sonia Bakkour3, Bingjun Wang2, Shuli Qing2, Jingxing Wang4, Limin Chen2, Michael Busch3, Hua Shan5, Jing Liu6, Tzong-Hae Lee4.   

Abstract

BACKGROUND: Severe fever with thrombocytopenia syndrome bunyavirus (sftsv) is an emerging tick-borne rna virus recently identified as the pathogen that causes severe fever with thrombocytopenia syndrome (sfts) in china. the existing commercial nucleic acid testing (comnat) assay with a relatively high claimed limit of quantitative detection (loqd) is not capable of sensitive detection and quantitation of sftsv. Thus, a new real-time reverse transcriptase (rt)-pcr assay with improved sensitivity is needed for clinical diagnosis; it could also be used to screen blood donors if necessary.
MATERIALS AND METHODS: We developed a new sftsv rt-pcr nat assay (newnat). About 129 plasma samples from 93 suspected sfts patients with typical clinical symptoms were tested using an anti-sftsv total antibody elisa and both comnat and newnat. The test performance of the two nat assays was evaluated and compared.
RESULTS: The newnat had a lower limit for quantitative testing compared to comnat. Twelve samples were comnat negative but newnat positive. Out of 35 suspected sfts patients who were comnat negative and anti-sftsv total antibody negative, four tested positive by the newnat assay and one of these four seroconverted within 2-4 days after testing newnat positive. A high correlation was observed between the cts of the newnat and comnat assays.
CONCLUSION: The newnat assay was sensitive for quantitative detection of sftsv and may be applicable to clinical diagnosis and studies of the need for blood donor screening.
© 2017 Wiley Periodicals, Inc.

Entities:  

Keywords:  RNA extraction; RNA purification; bunyavirus; test statistics

Mesh:

Substances:

Year:  2017        PMID: 28036115      PMCID: PMC5422136          DOI: 10.1002/jmv.24760

Source DB:  PubMed          Journal:  J Med Virol        ISSN: 0146-6615            Impact factor:   2.327


  15 in total

1.  Clinical progression and predictors of death in patients with severe fever with thrombocytopenia syndrome in China.

Authors:  Ning Cui; Xiao-Lei Bao; Zhen-Dong Yang; Qing-Bin Lu; Chun-Yan Hu; Li-Yuan Wang; Bing-Jun Wang; Hong-Yu Wang; Kun Liu; Chun Yuan; Xue-Juan Fan; Zhen Wang; Lan Zhang; Xiao-Ai Zhang; Liang-Ping Hu; Wei Liu; Wu-Chun Cao
Journal:  J Clin Virol       Date:  2013-10-31       Impact factor: 3.168

2.  Early diagnosis of novel SFTS bunyavirus infection by quantitative real-time RT-PCR assay.

Authors:  Yulan Sun; Mifang Liang; Jing Qu; Cong Jin; Quanfu Zhang; Jiandong Li; Xiaolin Jiang; Qin Wang; Jing Lu; Wen Gu; Shuo Zhang; Chuan Li; Xianjun Wang; Faxian Zhan; Wenqing Yao; Zhenqiang Bi; Shiwen Wang; Dexin Li
Journal:  J Clin Virol       Date:  2011-10-22       Impact factor: 3.168

3.  A study of seroprevalence and rates of asymptomatic viremia of severe fever with thrombocytopenia syndrome virus among Chinese blood donors.

Authors:  Peibin Zeng; Lili Ma; Zhan Gao; Jingxing Wang; Jing Liu; Xianwei Huang; Qizhi Yang; Ruan Cao; Xiuqiong Wen; Lili Zhu; Hongli Ma; Zhendong Yang; Tzong-Hae Lee; Donald Brambilla; Michelle Yuan; Simone Glynn; Paul Ness; Steve Kleinman; Michael Busch; Hua Shan
Journal:  Transfusion       Date:  2014-12-15       Impact factor: 3.157

4.  Development of a real-time polymerase chain reaction assay for sensitive detection and quantitation of Babesia microti infection.

Authors:  Evan M Bloch; Tzong-Hae Lee; Peter J Krause; Sam R Telford; Lani Montalvo; Daniel Chafets; Sahar Usmani-Brown; Timothy J Lepore; Michael P Busch
Journal:  Transfusion       Date:  2013-01-30       Impact factor: 3.157

5.  Epidemiological characteristics of severe fever with thrombocytopenia syndrome in Zhejiang Province, China.

Authors:  Jimin Sun; Chengliang Chai; Huakun Lv; Junfen Lin; Chengwei Wang; Enfu Chen; Yanjun Zhang; Zhiping Chen; Shelan Liu; Zhenyu Gong; Jianmin Jiang
Journal:  Int J Infect Dis       Date:  2014-06-16       Impact factor: 3.623

Review 6.  Severe fever with thrombocytopenia syndrome, an emerging tick-borne zoonosis.

Authors:  Quan Liu; Biao He; Si-Yang Huang; Feng Wei; Xing-Quan Zhu
Journal:  Lancet Infect Dis       Date:  2014-05-15       Impact factor: 25.071

7.  Metagenomic analysis of fever, thrombocytopenia and leukopenia syndrome (FTLS) in Henan Province, China: discovery of a new bunyavirus.

Authors:  Bianli Xu; Licheng Liu; Xueyong Huang; Hong Ma; Yuan Zhang; Yanhua Du; Pengzhi Wang; Xiaoyan Tang; Haifeng Wang; Kai Kang; Shiqiang Zhang; Guohua Zhao; Weili Wu; Yinhui Yang; Haomin Chen; Feng Mu; Weijun Chen
Journal:  PLoS Pathog       Date:  2011-11-17       Impact factor: 6.823

8.  Severe fever with thrombocytopenia syndrome virus among domesticated animals, China.

Authors:  Guoyu Niu; Jiandong Li; Mifang Liang; Xiaolin Jiang; Mei Jiang; Haiying Yin; Zhidian Wang; Chuan Li; Quanfu Zhang; Cong Jin; Xianjun Wang; Shujun Ding; Zheng Xing; Shiwen Wang; Zhenqiang Bi; Dexin Li
Journal:  Emerg Infect Dis       Date:  2013-05       Impact factor: 6.883

9.  First detection of heartland virus (Bunyaviridae: Phlebovirus) from field collected arthropods.

Authors:  Harry M Savage; Marvin S Godsey; Amy Lambert; Nicholas A Panella; Kristen L Burkhalter; Jessica R Harmon; R Ryan Lash; David C Ashley; William L Nicholson
Journal:  Am J Trop Med Hyg       Date:  2013-07-22       Impact factor: 2.345

10.  The first identification and retrospective study of Severe Fever with Thrombocytopenia Syndrome in Japan.

Authors:  Toru Takahashi; Ken Maeda; Tadaki Suzuki; Aki Ishido; Toru Shigeoka; Takayuki Tominaga; Toshiaki Kamei; Masahiro Honda; Daisuke Ninomiya; Takenori Sakai; Takanori Senba; Shozo Kaneyuki; Shota Sakaguchi; Akira Satoh; Takanori Hosokawa; Yojiro Kawabe; Shintaro Kurihara; Koichi Izumikawa; Shigeru Kohno; Taichi Azuma; Koichiro Suemori; Masaki Yasukawa; Tetsuya Mizutani; Tsutomu Omatsu; Yukie Katayama; Masaharu Miyahara; Masahito Ijuin; Kazuko Doi; Masaru Okuda; Kazunori Umeki; Tomoya Saito; Kazuko Fukushima; Kensuke Nakajima; Tomoki Yoshikawa; Hideki Tani; Shuetsu Fukushi; Aiko Fukuma; Momoko Ogata; Masayuki Shimojima; Noriko Nakajima; Noriyo Nagata; Harutaka Katano; Hitomi Fukumoto; Yuko Sato; Hideki Hasegawa; Takuya Yamagishi; Kazunori Oishi; Ichiro Kurane; Shigeru Morikawa; Masayuki Saijo
Journal:  J Infect Dis       Date:  2013-11-14       Impact factor: 5.226

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