Literature DB >> 28034628

Mitochondrial genome of the Christmas tree worm Spirobranchus giganteus (Annelida: Serpulidae) reveals a high substitution rate among annelids.

Victor Corrêa Seixas1, Claudia Augusta de Moraes Russo2, Paulo Cesar Paiva3.   

Abstract

Here we describe, for the first time, the mitochondrial genome of Spirobranchus giganteus (Annelida: Serpulidae) and compare it with all available annelid mitogenomes. The entire mitogenome has 22,058bp in length and bears 12 protein-coding genes (the ATP8 gene is missing), two rRNA, and 24 tRNA genes. The nucleotide composition and GC-skew are surprisingly different from those reported for other annelids. In addition, the pairwise genetic distances between the mitogenomes of S. giganteus and other annelids are higher than the distances for all annelid taxa analyzed. This result is consistent with a faster rate of mitochondrial sequence evolution in S. giganteus, which may explain the difficulty in obtaining PCR products with the available primers. The mitochondrial gene order of S. giganteus was remarkably different not only from that of the Sedentaria lineage, which includes S. giganteus, but also from the mitochondrial gene order of other major annelid lineages. The mitogenome of S. giganteus has no repetitive motifs despite its long control region (4769bp), but genes are shorter and have a lower AT content than other members of Annelida. Finally, we show that mitochondrial gene order rearrangements can directly correlate to variations in gene length.
Copyright © 2016 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Gene length evolution; Gene order; High-throughput sequencing; Mitogenome; Sabellida; Sequence evolution

Mesh:

Substances:

Year:  2016        PMID: 28034628     DOI: 10.1016/j.gene.2016.12.024

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  5 in total

1.  Multiple introns in a deep-sea Annelid (Decemunciger: Ampharetidae) mitochondrial genome.

Authors:  Angelo F Bernardino; Yuanning Li; Craig R Smith; Kenneth M Halanych
Journal:  Sci Rep       Date:  2017-06-27       Impact factor: 4.379

2.  Mitochondrial genome of the freshwater annelid Manayunkia occidentalis (Sabellida: Fabriciidae).

Authors:  Ekin Tilic; Stephen D Atkinson; Greg W Rouse
Journal:  Mitochondrial DNA B Resour       Date:  2020-09-03       Impact factor: 0.658

3.  Complete mitochondrial genome of the abalone shell-boring Polydora hoplura (Polychaeta, Spionidae).

Authors:  Soon Jeong Lee; Sang-Rae Lee
Journal:  Mitochondrial DNA B Resour       Date:  2022-03-02       Impact factor: 0.658

4.  Mitochondrial genomes of two Polydora (Spionidae) species provide further evidence that mitochondrial architecture in the Sedentaria (Annelida) is not conserved.

Authors:  Lingtong Ye; Tuo Yao; Jie Lu; Jingzhe Jiang; Changming Bai
Journal:  Sci Rep       Date:  2021-06-30       Impact factor: 4.379

5.  The Mitochondrial Genome of a Freshwater Pelagic Amphipod Macrohectopus branickii Is among the Longest in Metazoa.

Authors:  Elena V Romanova; Yurij S Bukin; Kirill V Mikhailov; Maria D Logacheva; Vladimir V Aleoshin; Dmitry Y Sherbakov
Journal:  Genes (Basel)       Date:  2021-12-20       Impact factor: 4.096

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.