Literature DB >> 28032205

Enterovirga rhinocerotis gen. nov., sp. nov., isolated from Rhinoceros unicornis faeces.

Xiu Chen1,2, Qin-Yuan Li1, Gui-Ding Li1,2, Hui Lei2, Yi Jiang3, Li Han4, Xue-Shi Huang2, Cheng-Lin Jiang1.   

Abstract

A novel strain, YIM 100770T, was isolated from Rhinoceros unicornis faeces collected from Yunnan Wild Animal Park, China. The taxonomic status was determined based on the physiological, biochemical and phylogenetic characteristics. Strain YIM 100770T was observed to be rod-shaped, non-motile, Gram-stain negative and aerobic. The G+C content of the genomic DNA was determined to be 68.5 mol%. The cells of strain YIM 100770T contain ubiquinone Q-10 as the respiratory quinone. The major fatty acids (>1%) were identified as Summed feature 8 (C18:1 ω7c and/or C18:1 ω6c; 78.1%), Summed feature 4 (iso-C17:1-I and/or anteiso-C17:1-B; 12.9%), C19:0 cyclo ω8c (2.8%), C16:0 (2.2%) and C18:0 (2.2%). Comparison of 16S rRNA gene sequences revealed the strain show high similarities with the members of the genera Psychroglaciecola (94.5%), Methylobacterium (90.5-94.1%) and Microvirga (92.0-93.3%) in the family Methylobacteriaceae. In addition, the strain also showed high similarities with the members of the genera Chelatococcus (93.7-94.0%) and Pseudochelatococcus (93.1-93.7%) in the family Beijerinckiacea, and the genus Bosea (93.1-93.8%) in the family Bradyrhizobiaceae. The phylogenetic analysis, combined with the chemical characteristics, suggest that the strain represents a novel genus in the order Rhizobiales of the class Alphaproteobacteria, for which the name Enterovirga rhinocerotis gen. nov., sp. nov. is proposed. The type strain of E. rhinocerotis is YIM 100770T (=DSM 25903T = CCTCC AB 2012048T).

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Keywords:  16S rRNA gene; Enterovirga rhinocerotis gen. nov., sp. nov.; Faeces

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Year:  2016        PMID: 28032205     DOI: 10.1007/s10482-016-0823-1

Source DB:  PubMed          Journal:  Antonie Van Leeuwenhoek        ISSN: 0003-6072            Impact factor:   2.271


  1 in total

1.  Comprehensive Phylogenomics of Methylobacterium Reveals Four Evolutionary Distinct Groups and Underappreciated Phyllosphere Diversity.

Authors:  Jean-Baptiste Leducq; David Sneddon; Malia Santos; Domitille Condrain-Morel; Geneviève Bourret; N Cecilia Martinez-Gomez; Jessica A Lee; James A Foster; Sergey Stolyar; B Jesse Shapiro; Steven W Kembel; Jack M Sullivan; Christopher J Marx
Journal:  Genome Biol Evol       Date:  2022-08-03       Impact factor: 4.065

  1 in total

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