| Literature DB >> 28028454 |
Christiaan W Winterbach1, Sam M Ferreira2, Paul J Funston3, Michael J Somers4.
Abstract
BACKGROUND: The range, population size and trend of large carnivores are important parameters to assess their status globally and to plan conservation strategies. One can use linear models to assess population size and trends of large carnivores from track-based surveys on suitable substrates. The conventional approach of a linear model with intercept may not intercept at zero, but may fit the data better than linear model through the origin. We assess whether a linear regression through the origin is more appropriate than a linear regression with intercept to model large African carnivore densities and track indices.Entities:
Keywords: AIC; Brown hyena; Cheetah; Conservation; Leopard; Lion; Spoor; Spotted hyena; Survey technique; Wild dog
Year: 2016 PMID: 28028454 PMCID: PMC5182995 DOI: 10.7717/peerj.2662
Source DB: PubMed Journal: PeerJ ISSN: 2167-8359 Impact factor: 2.984
Mean density and tracks density of respective carnivores used in linear regression models by Funston et al. (2010).
| Record number | Substrate | Location | Species | Density individuals/100 km2 | Density tracks/100 km |
|---|---|---|---|---|---|
| 1 | Sandy | Dune-north | Lion | 0.67 | 1.6 |
| 2 | Sandy | Dune-south | Lion | 0.95 | 2.9 |
| 3 | Sandy | Sesatswe | Lion | 1.35 | 5.5 |
| 4 | Sandy | Mabuasehube | Lion | 1.68 | 4.5 |
| 5 | Sandy | Mosimane | Lion | 2.2 | 7.2 |
| 6 | Sandy | Main camp | Lion | 2.73 | 9.5 |
| 7 | Sandy | Venetia | Lion | 3.3 | 9.7 |
| 8 | Sandy | El Karama | Lion | 5.8 | 18.2 |
| 9 | Sandy | Mugie | Lion | 6 | 17.8 |
| 10 | Sandy | Mpala | Lion | 6.15 | 22.5 |
| 11 | Sandy | Dune-north | Cheetah | 0.54 | 1.7 |
| 12 | Sandy | Dune-south | Cheetah | 0.54 | 4.9 |
| 13 | Sandy | Dune-north | Leopard | 0.27 | 0.8 |
| 14 | Sandy | Dune-south | Leopard | 0.27 | 0.4 |
| 15 | Sandy | Dune-north | Spotted Hyaena | 0.9 | 4.7 |
| 16 | Sandy | Dune-south | Spotted Hyaena | 0.9 | 3.4 |
| 17 | Clay | Short-grass dry | Lion | 7 | 1.5 |
| 18 | Clay | Short-grass wet | Lion | 20 | 10.5 |
| 19 | Clay | Long-grass wet | Lion | 21.08 | 8 |
| 20 | Clay | Long-grass dry | Lion | 24.28 | 16.5 |
| 21 | Clay | Short-grass dry | Cheetah | 2.26 | 1.0 |
| 22 | Clay | Long-grass wet | Cheetah | 2.29 | 0.9 |
| 23 | Clay | Short-grass wet | Cheetah | 6.78 | 9.0 |
| 24 | Clay | Long-grass dry | Cheetah | 9.16 | 1.6 |
Additional mean density and tracks density of brown hyaena from Funston et al. (2010) and leopard from Stander (1998).
| Record number | Substrate | Location | Species | Density individuals/100 km2 | Density tracks/100 km |
|---|---|---|---|---|---|
| 25 | Sandy | Dune-south | Brown Hyaena | 1.6 | 5.2 |
| 26 | Sandy | Dune-north | Brown Hyaena | 1.6 | 6.4 |
| 27 | Sandy | Experimental | Leopard | 1.45 | 2.62 |
Criteria to assess the use of linear regression through origin over linear regression with intercept.
| Criteria | Source |
|---|---|
| ( | |
| Null hypothesis that ß = 0 is not rejected based on | ( |
| Mean Squares Residual is smaller for regression through the origin than regression with intercept, indicating a better fit. | ( |
| Standard error is smaller for regression through the origin than regression with intercept, indicating a better fit. | ( |
Summary of linear regression with intercept and through the origin for carnivore density (predictor) and track density (dependent) on sandy and clay soils.
R square measures the proportion of variation in the data described by the linear regression with intercept. R square measures the proportion of the variability in the dependent variable about the origin explained by regression through the origin. This cannot be compared to R square.
| Model | Description | Linear regression | Significance | R square | R square | |
|---|---|---|---|---|---|---|
| Model 1 | Lion sandy soil with intercept | 0.972 | ||||
| Lion sandy soil through origin | 0.990 | |||||
| Model 2 | Carnivores sandy soil with intercept | 0.962 | ||||
| Carnivores sandy soil through origin | 0.981 | |||||
| Model 3 | General carnivores on sand with intercept | 0.954 | ||||
| General carnivores on sand through origin | 0.979 | |||||
| Model 4 | Lion on clay with intercept | 0.833 | ||||
| Lion on clay through origin | 0.937 | |||||
| Model 5 | Lion and Cheetah on clay with intercept | 0.710 | ||||
| Lion and Cheetah on clay through origin | 0.873 | |||||
| Model 6 | Low density on sandy soil with intercept | 0.435 | ||||
| Low density on sandy soil through origin | 0.841 |
Coefficients for linear regressions with intercept and linear regression through origin using density (predictor) and tracks (dependent).
Standard error for coefficient, coefficient of variance, t value and level of significance are shown for each model coefficient.
| Model | Description | Coefficient | Value | SE of coefficient | CV (%) | Significance level | Lower bound | Upper bound | |
|---|---|---|---|---|---|---|---|---|---|
| Model 1 | Lion sandy soil with intercept | Constant (b) | −0.31 | 0.8 | 258.1 | −0.385 | −2.196 | 1.58 | |
| Lion sandy soil with intercept | Rate of change (a) | 3.3 | 0.21 | 6.4 | 15.65 | 2.8 | 3.796 | ||
| Lion sandy soil through origin | Rate of change (a) | 3.23 | 0.11 | 3.4 | 28.633 | 2.971 | 3.491 | ||
| Model 2 | Carnivores sandy soil with intercept | Constant (b) | 0.42 | 0.51 | 121.4 | 0.813 | −0.69 | 1.523 | |
| Carnivores sandy soil with intercept | Rate of change (a) | 3.16 | 0.17 | 5.4 | 18.256 | 2.785 | 3.532 | ||
| Carnivores sandy soil through origin | Rate of change (a) | 3.26 | 0.12 | 3.7 | 27.058 | 3 | 3.516 | ||
| Model 3 | General Carnivores on sand with intercept | Constant (b) | 0.31 | 0.47 | 151.6 | 0.656 | −0.68 | 1.29 | |
| General Carnivores on sand with intercept | Rate of change (a) | 3.18 | 0.17 | 5.3 | 18.884 | 2.83 | 3.54 | ||
| General Carnivores on sand through origin | Rate of change (a) | 3.26 | 0.11 | 3.4 | 29.169 | 3.03 | 3.5 | ||
| Model 4 | Lion on clay with intercept | Constant (b) | −4.34 | 4.53 | 104.4 | −0.958 | −23.85 | 15.16 | |
| Lion on clay with intercept | Rate of change (a) | 0.75 | 0.24 | 32.0 | 3.162 | −0.27 | 1.76 | ||
| Lion on clay through origin | Rate of change (a) | 0.53 | 0.08 | 15.1 | 6.697 | 0.28 | 0.79 | ||
| Model 5 | Lion and Cheetah on clay with intercept | Constant (b) | −0.28 | 2.05 | 732.1 | −0.137 | −5.299 | 4.737 | |
| Lion and Cheetah on clay with intercept | Rate of change (a) | 0.55 | 0.14 | 25.5 | 3.833 | 0.2 | 0.904 | ||
| Lion and Cheetah on clay through origin | Rate of change (a) | 0.54 | 0.08 | 14.8 | 6.924 | 0.353 | 0.719 | ||
| Model 6 | Low density on sandy soil with intercept | Constant (b) | −0.03 | 1.30 | 4333.3 | −0.025 | −3.208 | 3.143 | |
| Low density on sandy soil with intercept | Rate of change (a) | 4.10 | 1.91 | 46.6 | 2.148 | -.570 | 8.769 | ||
| Low density on sandy soil through origin | Rate of change (a) | 4.06 | 0.69 | 17.0 | 6.092 | 2.481 | 5.629 |
Evaluation of linear regression models for carnivore density (predictor) and track density (dependent) on sandy and clay soils.
Smaller values of standard error of estimate, mean square residual and small sample corrected Akaike Information Criteria (AICc) indicate better fit of model.
| Model | Description | Linear regression | Standard error of estimate | Mean square residual | AICc | Δ | |
|---|---|---|---|---|---|---|---|
| Model 1 | Lion sandy soil through origin | 1.283 | 1.645 | 8.46 | 0.00 | 0.88 | |
| Lion sandy soil with intercept | 1.357 | 1.841 | 12.54 | 4.08 | 0.12 | ||
| Model 2 | Carnivores sandy soil through origin | 1.381 | 1.907 | 13.12 | 0.00 | 0.76 | |
| Carnivores sandy soil with intercept | 1.398 | 1.955 | 15.40 | 2.28 | 0.24 | ||
| Model 3 | General Carnivores on sand through origin | 1.352 | 1.828 | 15.18 | 0.00 | 0.77 | |
| General Carnivores on sand with intercept | 1.374 | 1.888 | 17.56 | 2.38 | 0.23 | ||
| Model 4 | Lion on clay through origin | 3.063 | 9.379 | 23.80 | 0.00 | – | |
| Lion on clay with intercept | 3.105 | 9.642 | – | – | – | ||
| Model 5 | Lion and Cheetah on clay through origin | 3.118 | 9.722 | 23.53 | 0.00 | 0.94 | |
| Lion and Cheetah on clay with intercept | 3.363 | 11.307 | 29.10 | 5.58 | 0.06 | ||
| Model 6 | Low density on sandy soil through origin | 1.28 | 1.639 | 9.29 | 0.00 | 0.94 | |
| Low density on sandy soil with intercept | 1.383 | 1.912 | 14.89 | 5.60 | 0.06 |
Comparison of carnivore population estimates for a reference area of 10,000 km, using different models to estimate density (animals/100 km2) from track densities (tracks/100 km).
The survey distances to obtain the recommended minimum of 19 track incidences at different track densities are shown.
| Source | Species | Track density (tracks/100 km) | Survey distance for 19 track incidences (km) | Leopard model a | Carnivore on sand intercept modelb | General carnivore on sand origin model c | Difference ( | |||
|---|---|---|---|---|---|---|---|---|---|---|
| Density (animals/100 km2) | Population estimate | Density (animals/100 km2) | Population estimate | Density (animals/100 km2) | Population estimate | |||||
| Leopard | 0.00 | 0.00 | 0 | −0.13 | −13 | 0.00 | 0 | |||
| Leopard | 0.10 | 19,000 | 0.05 | 5 | −0.10 | −10 | 0.03 | 3 | 410.5 | |
| Leopard | 0.20 | 9,500 | 0.11 | 11 | −0.06 | −6 | 0.06 | 6 | 203.5 | |
| 0.40 | 4,750 | 0.21 | 21 | 0.00 | 0 | 0.12 | 12 | 100.0 | ||
| Leopard | 0.47 | 4,043 | 0.25 | 25 | 0.02 | 2 | 0.14 | 14 | 84.6 | |
| Lower extrapolation limit | 0.88 | 2,159 | 0.46 | 46 | 0.15 | 15 | 0.27 | 27 | 43.5 | |
| Cheetah | 1.02 | 1,863 | 0.20 | 20 | 0.31 | 31 | 37.1 | |||
| Cheetah | 2.24 | 848 | 0.58 | 58 | 0.69 | 69 | 15.0 | |||
| Leopard | 2.62 | 725 | 1.38 | 138 | 0.70 | 70 | 0.80 | 80 | 12.3 | |
| Lion | 3.05 | 623 | 0.84 | 84 | 0.94 | 94 | 10.1 | |||
| Lion | 5.36 | 354 | 1.57 | 157 | 1.64 | 164 | 4.2 | |||
| Brown hyaena | 6.15 | 309 | 1.83 | 183 | 1.89 | 189 | 3.2 | |||
| Brown hyaena | 7.90 | 241 | 2.38 | 238 | 2.42 | 242 | 1.7 | |||