Literature DB >> 28027878

Modeling the light-induced electric potential difference ΔΨ across the thylakoid membrane based on the transition state rate theory.

Hui Lyu1, Dušan Lazár2.   

Abstract

In photosynthesis, electron transport-coupled proton movement initiates the formation of the light-induced electric potential difference, ΔΨ, across the thylakoid membrane (TM). Ions are transported across the TM to counterbalance the charge of protons accumulated in the lumen. The objective of this work is to construct range of mathematical models for simulation of ΔΨ, using the transition state rate theory (TSRT) for description of movement of ions through the channels. The TSRT considers either single-ion (TSRT-SI) or multi-ion occupancy (TSRT-MI) in the channels. Movement of ions through the channel pore is described by means of energy barriers and binding sites; ions move in and out of vacant sites with rate constants that depend on the barrier heights and well depths, as well as on the interionic repulsion in TSRT-MI model. Three energy motifs are used to describe the TSRT-SI model: two-barrier one-site (2B1S), three-barrier two-site (3B2S), and four-barrier three-site (4B3S). The 3B2S energy motif is used for the TSRT-MI model. The accumulation of cations due to the TM surface negative fixed charges is also taken into account. A model employing the electro-diffusion theory instead of the TSRT is constructed for comparison. The dual wavelength transmittance signal (ΔA515-560nm) measuring the electrochromic shift (ECS) provides a proxy for experimental light-induced ΔΨ. The simulated ΔΨ traces qualitatively agree with the measured ECS traces. The models can simulate different channel conducting regimes and assess their impact on ΔΨ. The ionic flux coupling in the TSRT-MI model suggests that an increase in the internal or external K+ concentration may block the outward or the inward Mg2+ current, respectively.
Copyright © 2016 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Electric potential difference ΔΨ; Electrochromic shift; Ion channel; Modeling; Thylakoid membrane; Transition state rate theory

Mesh:

Substances:

Year:  2016        PMID: 28027878     DOI: 10.1016/j.bbabio.2016.12.009

Source DB:  PubMed          Journal:  Biochim Biophys Acta Bioenerg        ISSN: 0005-2728            Impact factor:   3.991


  4 in total

Review 1.  Photosynthesis: basics, history and modelling.

Authors:  Alexandrina Stirbet; Dušan Lazár; Ya Guo; Govindjee Govindjee
Journal:  Ann Bot       Date:  2020-09-14       Impact factor: 4.357

2.  Insights on the regulation of photosynthesis in pea leaves exposed to oscillating light.

Authors:  Dušan Lazár; Yuxi Niu; Ladislav Nedbal
Journal:  J Exp Bot       Date:  2022-10-18       Impact factor: 7.298

3.  Photosynthesis dynamics and regulation sensed in the frequency domain.

Authors:  Ladislav Nedbal; Dušan Lazár
Journal:  Plant Physiol       Date:  2021-10-05       Impact factor: 8.005

4.  Analyzing the effect of ion binding to the membrane-surface on regulating the light-induced transthylakoid electric potential (ΔΨm).

Authors:  Hui Lyu; Dušan Lazár
Journal:  Front Plant Sci       Date:  2022-07-28       Impact factor: 6.627

  4 in total

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