Literature DB >> 28013218

Editor's Highlight: Genetic Targets of Acute Toluene Inhalation in Drosophila melanogaster.

Philip J Bushnell1, William O Ward1, Tatiana V Morozova2, Wendy M Oshiro1, Mimi T Lin3, Richard S Judson4, Susan D Hester1, John M McKee1, Mark Higuchi1.   

Abstract

Interpretation and use of data from high-throughput assays for chemical toxicity require links between effects at molecular targets and adverse outcomes in whole animals. The well-characterized genome of Drosophila melanogaster provides a potential model system by which phenotypic responses to chemicals can be mapped to genes associated with those responses, which may in turn suggest adverse outcome pathways associated with those genes. To determine the utility of this approach, we used the Drosophila Genetics Reference Panel (DGRP), a collection of ∼200 homozygous lines of fruit flies whose genomes have been sequenced. We quantified toluene-induced suppression of motor activity in 123 lines of these flies during exposure to toluene, a volatile organic compound known to induce narcosis in mammals via its effects on neuronal ion channels. We then applied genome-wide association analyses on this effect of toluene using the DGRP web portal (http://dgrp2.gnets.ncsu.edu), which identified polymorphisms in candidate genes associated with the variation in response to toluene exposure. We tested ∼2 million variants and found 82 polymorphisms located in or near 66 candidate genes that were associated with phenotypic variation for sensitivity to toluene at P < 5 × 10-5, and human orthologs for 52 of these candidate Drosophila genes. None of these orthologs are known to be involved in canonical pathways for mammalian neuronal ion channels, including GABA, glutamate, dopamine, glycine, serotonin, and voltage sensitive calcium channels. Thus this analysis did not reveal a genetic signature consistent with processes previously shown to be involved in toluene-induced narcosis in mammals. The list of the human orthologs included Gene Ontology terms associated with signaling, nervous system development and embryonic morphogenesis; these orthologs may provide insight into potential new pathways that could mediate the narcotic effects of toluene. Published by Oxford University Press on behalf of the Society of Toxicology 2016. This work is written by US Government employees and is in the public domain in the US.

Entities:  

Keywords:  DGRP.; fruit fly; genome-wide association; motor activity; narcosis; volatile organic compound

Mesh:

Substances:

Year:  2017        PMID: 28013218      PMCID: PMC5837442          DOI: 10.1093/toxsci/kfw243

Source DB:  PubMed          Journal:  Toxicol Sci        ISSN: 1096-0929            Impact factor:   4.849


  40 in total

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Authors:  Scott E Bowen; Jeffery C Batis; Nayeli Paez-Martinez; Silvia L Cruz
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2.  Toxicology. Transforming environmental health protection.

Authors:  Francis S Collins; George M Gray; John R Bucher
Journal:  Science       Date:  2008-02-15       Impact factor: 47.728

3.  Glycine and gamma-aminobutyric acid(A) receptor function is enhanced by inhaled drugs of abuse.

Authors:  M J Beckstead; J L Weiner; E I Eger; D H Gong; S J Mihic
Journal:  Mol Pharmacol       Date:  2000-06       Impact factor: 4.436

Review 4.  Potassium channels in Drosophila: historical breakthroughs, significance, and perspectives.

Authors:  Roman V Frolov; Archis Bagati; Brittany Casino; Satpal Singh
Journal:  J Neurogenet       Date:  2012-09       Impact factor: 1.250

5.  Acute high-level toluene exposure decreases hippocampal neurogenesis in rats.

Authors:  Jin-Ha Yoon; Heung-Sik Seo; Jinsoo Lee; Changjong Moon; Kyuhong Lee
Journal:  Toxicol Ind Health       Date:  2016-07-09       Impact factor: 2.273

6.  Inhibitory effect of 1,1,1-trichloroethane on calcium channels of neurons.

Authors:  M Okuda; I Kunitsugu; S Kobayakawa; T Hobara
Journal:  J Toxicol Sci       Date:  2001-08       Impact factor: 2.196

7.  A comparison of the acute behavioral effects of alkylbenzenes using a functional observational battery in mice.

Authors:  J S Tegeris; R L Balster
Journal:  Fundam Appl Toxicol       Date:  1994-02

8.  Volatile organic compounds inhibit human and rat neuronal nicotinic acetylcholine receptors expressed in Xenopus oocytes.

Authors:  Ambuja S Bale; Connie A Meacham; Vernon A Benignus; Philip J Bushnell; Timothy J Shafer
Journal:  Toxicol Appl Pharmacol       Date:  2004-11-11       Impact factor: 4.219

9.  The Drosophila melanogaster Genetic Reference Panel.

Authors:  Trudy F C Mackay; Stephen Richards; Eric A Stone; Antonio Barbadilla; Julien F Ayroles; Dianhui Zhu; Sònia Casillas; Yi Han; Michael M Magwire; Julie M Cridland; Mark F Richardson; Robert R H Anholt; Maite Barrón; Crystal Bess; Kerstin Petra Blankenburg; Mary Anna Carbone; David Castellano; Lesley Chaboub; Laura Duncan; Zeke Harris; Mehwish Javaid; Joy Christina Jayaseelan; Shalini N Jhangiani; Katherine W Jordan; Fremiet Lara; Faye Lawrence; Sandra L Lee; Pablo Librado; Raquel S Linheiro; Richard F Lyman; Aaron J Mackey; Mala Munidasa; Donna Marie Muzny; Lynne Nazareth; Irene Newsham; Lora Perales; Ling-Ling Pu; Carson Qu; Miquel Ràmia; Jeffrey G Reid; Stephanie M Rollmann; Julio Rozas; Nehad Saada; Lavanya Turlapati; Kim C Worley; Yuan-Qing Wu; Akihiko Yamamoto; Yiming Zhu; Casey M Bergman; Kevin R Thornton; David Mittelman; Richard A Gibbs
Journal:  Nature       Date:  2012-02-08       Impact factor: 49.962

10.  FlyBase 101--the basics of navigating FlyBase.

Authors:  Peter McQuilton; Susan E St Pierre; Jim Thurmond
Journal:  Nucleic Acids Res       Date:  2011-11-29       Impact factor: 16.971

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  2 in total

1.  Motor dysfunction in Drosophila melanogaster as a biomarker for developmental neurotoxicity.

Authors:  Ana Cabrita; Alexandra M Medeiros; Telmo Pereira; António Sebastião Rodrigues; Michel Kranendonk; César S Mendes
Journal:  iScience       Date:  2022-06-07

2.  The road less traveled: from genotype to phenotype in flies and humans.

Authors:  Robert R H Anholt; Trudy F C Mackay
Journal:  Mamm Genome       Date:  2017-10-20       Impact factor: 2.957

  2 in total

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