Literature DB >> 28009300

Lineage-Specific and Non-specific Cytokine-Sensing Genes Respond Differentially to the Master Regulator STAT5.

Xianke Zeng1, Michaela Willi2, Ha Youn Shin1, Lothar Hennighausen3, Chaochen Wang4.   

Abstract

STAT5, a member of the family of signal transducers and activators of transcription, senses cytokines and controls the biology of cell lineages, including mammary, liver, and T cells. Here, we show that STAT5 activates lineage-specific and widely expressed genes through different mechanisms. STAT5 preferentially binds to promoter sequences of cytokine-responsive genes expressed across cell types and to putative enhancers of lineage-specific genes. While chromatin accessibility of STAT5-based enhancers was dependent on cytokine exposure, STAT5-responsive promoters of widely expressed target genes were generally constitutively accessible. While the contribution of STAT5 to enhancers is well established, its role on promoters is poorly understood. To address this, we focused on Socs2, a widely expressed cytokine-sensing gene. Upon deletion of the STAT5 response elements from the Socs2 promoter in mice, cytokine induction was abrogated, while basal activity remained intact. Our data suggest that promoter-bound STAT5 modulates cytokine responses and enhancer-bound STAT5 is mandatory for gene activation. Published by Elsevier Inc.

Entities:  

Keywords:  SOCS2; STAT5; cytokine; enhancer; mammary gland; promoter

Mesh:

Substances:

Year:  2016        PMID: 28009300      PMCID: PMC5217531          DOI: 10.1016/j.celrep.2016.11.079

Source DB:  PubMed          Journal:  Cell Rep            Impact factor:   9.423


  46 in total

1.  Inactivation of Stat5 in mouse mammary epithelium during pregnancy reveals distinct functions in cell proliferation, survival, and differentiation.

Authors:  Yongzhi Cui; Greg Riedlinger; Keiko Miyoshi; Wei Tang; Cuiling Li; Chu-Xia Deng; Gertraud W Robinson; Lothar Hennighausen
Journal:  Mol Cell Biol       Date:  2004-09       Impact factor: 4.272

2.  Mammary-specific gene activation is defined by progressive recruitment of STAT5 during pregnancy and the establishment of H3K4me3 marks.

Authors:  Keunsoo Kang; Daisuke Yamaji; Kyung Hyun Yoo; Gertraud W Robinson; Lothar Hennighausen
Journal:  Mol Cell Biol       Date:  2013-11-25       Impact factor: 4.272

3.  Fast gapped-read alignment with Bowtie 2.

Authors:  Ben Langmead; Steven L Salzberg
Journal:  Nat Methods       Date:  2012-03-04       Impact factor: 28.547

4.  Dynamic, sex-differential STAT5 and BCL6 binding to sex-biased, growth hormone-regulated genes in adult mouse liver.

Authors:  Yijing Zhang; Ekaterina V Laz; David J Waxman
Journal:  Mol Cell Biol       Date:  2011-12-12       Impact factor: 4.272

Review 5.  Growth hormone-STAT5 regulation of growth, hepatocellular carcinoma, and liver metabolism.

Authors:  Myunggi Baik; Ji Hoon Yu; Lothar Hennighausen
Journal:  Ann N Y Acad Sci       Date:  2011-07       Impact factor: 5.691

6.  Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles.

Authors:  Aravind Subramanian; Pablo Tamayo; Vamsi K Mootha; Sayan Mukherjee; Benjamin L Ebert; Michael A Gillette; Amanda Paulovich; Scott L Pomeroy; Todd R Golub; Eric S Lander; Jill P Mesirov
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-30       Impact factor: 11.205

Review 7.  Genomic views of STAT function in CD4+ T helper cell differentiation.

Authors:  John J O'Shea; Riitta Lahesmaa; Golnaz Vahedi; Arian Laurence; Yuka Kanno
Journal:  Nat Rev Immunol       Date:  2011-04       Impact factor: 53.106

8.  Characterization of Stat5a and Stat5b homodimers and heterodimers and their association with the glucocortiocoid receptor in mammary cells.

Authors:  N Cella; B Groner; N E Hynes
Journal:  Mol Cell Biol       Date:  1998-04       Impact factor: 4.272

Review 9.  Interpretation of cytokine signaling through the transcription factors STAT5A and STAT5B.

Authors:  Lothar Hennighausen; Gertraud W Robinson
Journal:  Genes Dev       Date:  2008-03-15       Impact factor: 11.361

10.  deepTools: a flexible platform for exploring deep-sequencing data.

Authors:  Fidel Ramírez; Friederike Dündar; Sarah Diehl; Björn A Grüning; Thomas Manke
Journal:  Nucleic Acids Res       Date:  2014-05-05       Impact factor: 16.971

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  9 in total

Review 1.  Dissecting Tissue-Specific Super-Enhancers by Integrating Genome-Wide Analyses and CRISPR/Cas9 Genome Editing.

Authors:  Kyung Hyun Yoo; Lothar Hennighausen; Ha Youn Shin
Journal:  J Mammary Gland Biol Neoplasia       Date:  2018-10-06       Impact factor: 2.673

Review 2.  STAT5-Driven Enhancers Tightly Control Temporal Expression of Mammary-Specific Genes.

Authors:  Ha Youn Shin; Lothar Hennighausen; Kyung Hyun Yoo
Journal:  J Mammary Gland Biol Neoplasia       Date:  2018-10-17       Impact factor: 2.673

3.  Redundant and non-redundant cytokine-activated enhancers control Csn1s2b expression in the lactating mouse mammary gland.

Authors:  Hye Kyung Lee; Michaela Willi; Tyler Kuhns; Chengyu Liu; Lothar Hennighausen
Journal:  Nat Commun       Date:  2021-04-14       Impact factor: 14.919

4.  Oxytocin receptor induces mammary tumorigenesis through prolactin/p-STAT5 pathway.

Authors:  Dan Li; Mingjun San; Jing Zhang; Anlan Yang; Wanhua Xie; Yang Chen; Xiaodan Lu; Yuntao Zhang; Mingyue Zhao; Xuechao Feng; Yaowu Zheng
Journal:  Cell Death Dis       Date:  2021-06-07       Impact factor: 8.469

Review 5.  The molecular basis of mammary gland development and epithelial differentiation.

Authors:  Priscila Ferreira Slepicka; Amritha Varshini Hanasoge Somasundara; Camila O Dos Santos
Journal:  Semin Cell Dev Biol       Date:  2020-10-17       Impact factor: 7.499

6.  CRISPR/Cas9 targeting events cause complex deletions and insertions at 17 sites in the mouse genome.

Authors:  Ha Youn Shin; Chaochen Wang; Hye Kyung Lee; Kyung Hyun Yoo; Xianke Zeng; Tyler Kuhns; Chul Min Yang; Teresa Mohr; Chengyu Liu; Lothar Hennighausen
Journal:  Nat Commun       Date:  2017-05-31       Impact factor: 14.919

Review 7.  Implications of STAT3 and STAT5 signaling on gene regulation and chromatin remodeling in hematopoietic cancer.

Authors:  Bettina Wingelhofer; Heidi A Neubauer; Peter Valent; Xiaonan Han; Stefan N Constantinescu; Patrick T Gunning; Mathias Müller; Richard Moriggl
Journal:  Leukemia       Date:  2018-03-27       Impact factor: 11.528

8.  Cooperative Enhancer Activation by TLX1 and STAT5 Drives Development of NUP214-ABL1/TLX1-Positive T Cell Acute Lymphoblastic Leukemia.

Authors:  Marlies Vanden Bempt; Sofie Demeyer; Michaël Broux; Jolien De Bie; Simon Bornschein; Nicole Mentens; Roel Vandepoel; Ellen Geerdens; Enrico Radaelli; Beat C Bornhauser; Andreas E Kulozik; Jules P Meijerink; Jean-Pierre Bourquin; Charles E de Bock; Jan Cools
Journal:  Cancer Cell       Date:  2018-08-13       Impact factor: 31.743

9.  IL-2/IL-7-inducible factors pioneer the path to T cell differentiation in advance of lineage-defining factors.

Authors:  Sarah L Bevington; Peter Keane; Jake K Soley; Saskia Tauch; Dominika W Gajdasik; Remi Fiancette; Veronika Matei-Rascu; Claire M Willis; David R Withers; Peter N Cockerill
Journal:  EMBO J       Date:  2020-09-15       Impact factor: 14.012

  9 in total

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