Literature DB >> 28004461

En route towards the peptide γ-helix: X-ray diffraction analyses and conformational energy calculations of Adm-rich short peptides.

Daniela Mazzier1, Luigi Grassi1, Alessandro Moretto1,2, Carlos Alemán3, Fernando Formaggio1,2, Claudio Toniolo1,2, Marco Crisma2.   

Abstract

We performed the solution-phase synthesis of a set of model peptides, including homo-oligomers, based on the 2-aminoadamantane-2-carboxylic acid (Adm) residue, an extremely bulky, highly lipophilic, tricyclic, achiral, Cα -tetrasubstituted α-amino acid. In particular, for the difficult peptide coupling reaction between two Adm residues, we took advantage of the Meldal's α-azidoacyl chloride approach. Most of the synthesized Adm peptides were characterized by single-crystal X-ray diffraction analyses. The results indicate a significant propensity for the Adm residue to adopt γ-turn and γ-turn-like conformations. Interestingly, we found that a -CO-(Adm)2 -NH- sequence is folded in the crystal state into a regular, incipient γ-helix, at variance with the behavior of all of the homo-dipeptides from Cα -tetrasubstituted α-amino acids already investigated, which tend to adopt either the β-turn or the fully extended conformation. Our density functional theory conformational energy calculations on the terminally blocked homo-peptides (n = 2-8) fully confirmed the crystal-state data, strongly supporting the view that this rigid Cα -tetrasubstituted α-amino acid residue is largely the most effective building block for γ-helix induction, although to a limited length (anti-cooperative effect).
Copyright © 2016 European Peptide Society and John Wiley & Sons, Ltd. Copyright © 2016 European Peptide Society and John Wiley & Sons, Ltd.

Entities:  

Keywords:  Adm peptides; X-ray diffraction; conformational energy calculations; γ-helix; γ-turns

Mesh:

Substances:

Year:  2016        PMID: 28004461     DOI: 10.1002/psc.2957

Source DB:  PubMed          Journal:  J Pept Sci        ISSN: 1075-2617            Impact factor:   1.905


  1 in total

1.  Isolated α-turn and incipient γ-helix.

Authors:  Fatemeh M Mir; Marco Crisma; Claudio Toniolo; William D Lubell
Journal:  Chem Sci       Date:  2019-06-10       Impact factor: 9.825

  1 in total

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