Literature DB >> 27990453

Lung nodule malignancy classification using only radiologist-quantified image features as inputs to statistical learning algorithms: probing the Lung Image Database Consortium dataset with two statistical learning methods.

Matthew C Hancock1, Jerry F Magnan1.   

Abstract

In the assessment of nodules in CT scans of the lungs, a number of image-derived features are diagnostically relevant. Currently, many of these features are defined only qualitatively, so they are difficult to quantify from first principles. Nevertheless, these features (through their qualitative definitions and interpretations thereof) are often quantified via a variety of mathematical methods for the purpose of computer-aided diagnosis (CAD). To determine the potential usefulness of quantified diagnostic image features as inputs to a CAD system, we investigate the predictive capability of statistical learning methods for classifying nodule malignancy. We utilize the Lung Image Database Consortium dataset and only employ the radiologist-assigned diagnostic feature values for the lung nodules therein, as well as our derived estimates of the diameter and volume of the nodules from the radiologists' annotations. We calculate theoretical upper bounds on the classification accuracy that are achievable by an ideal classifier that only uses the radiologist-assigned feature values, and we obtain an accuracy of 85.74 [Formula: see text], which is, on average, 4.43% below the theoretical maximum of 90.17%. The corresponding area-under-the-curve (AUC) score is 0.932 ([Formula: see text]), which increases to 0.949 ([Formula: see text]) when diameter and volume features are included and has an accuracy of 88.08 [Formula: see text]. Our results are comparable to those in the literature that use algorithmically derived image-based features, which supports our hypothesis that lung nodules can be classified as malignant or benign using only quantified, diagnostic image features, and indicates the competitiveness of this approach. We also analyze how the classification accuracy depends on specific features and feature subsets, and we rank the features according to their predictive power, statistically demonstrating the top four to be spiculation, lobulation, subtlety, and calcification.

Entities:  

Keywords:  Lung Image Database Consortium dataset; computer-aided diagnosis; logistic regression; lung nodule classification; machine learning; random forests

Year:  2016        PMID: 27990453      PMCID: PMC5146644          DOI: 10.1117/1.JMI.3.4.044504

Source DB:  PubMed          Journal:  J Med Imaging (Bellingham)        ISSN: 2329-4302


  32 in total

1.  Shape recovery algorithms using level sets in 2-D/3-D medical imagery: a state-of-the-art review.

Authors:  Jasjit S Suri; Kecheng Liu; Sameer Singh; Swamy N Laxminarayan; Xiaolan Zeng; Laura Reden
Journal:  IEEE Trans Inf Technol Biomed       Date:  2002-03

2.  Fractal analysis of small peripheral pulmonary nodules in thin-section CT: evaluation of the lung-nodule interfaces.

Authors:  Shoji Kido; Keiko Kuriyama; Masahiko Higashiyama; Tsutomu Kasugai; Chikazumi Kuroda
Journal:  J Comput Assist Tomogr       Date:  2002 Jul-Aug       Impact factor: 1.826

3.  Probabilistic lung nodule classification with belief decision trees.

Authors:  Dmitriy Zinovev; Jonathan Feigenbaum; Jacob Furst; Daniela Raicu
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2011

4.  Mapping LIDC, RadLex™, and lung nodule image features.

Authors:  Pia Opulencia; David S Channin; Daniela S Raicu; Jacob D Furst
Journal:  J Digit Imaging       Date:  2011-04       Impact factor: 4.056

5.  The Lung Image Database Consortium (LIDC) data collection process for nodule detection and annotation.

Authors:  Michael F McNitt-Gray; Samuel G Armato; Charles R Meyer; Anthony P Reeves; Geoffrey McLennan; Richie C Pais; John Freymann; Matthew S Brown; Roger M Engelmann; Peyton H Bland; Gary E Laderach; Chris Piker; Junfeng Guo; Zaid Towfic; David P-Y Qing; David F Yankelevitz; Denise R Aberle; Edwin J R van Beek; Heber MacMahon; Ella A Kazerooni; Barbara Y Croft; Laurence P Clarke
Journal:  Acad Radiol       Date:  2007-12       Impact factor: 3.173

6.  The Lung Image Database Consortium (LIDC): an evaluation of radiologist variability in the identification of lung nodules on CT scans.

Authors:  Samuel G Armato; Michael F McNitt-Gray; Anthony P Reeves; Charles R Meyer; Geoffrey McLennan; Denise R Aberle; Ella A Kazerooni; Heber MacMahon; Edwin J R van Beek; David Yankelevitz; Eric A Hoffman; Claudia I Henschke; Rachael Y Roberts; Matthew S Brown; Roger M Engelmann; Richard C Pais; Christopher W Piker; David Qing; Masha Kocherginsky; Barbara Y Croft; Laurence P Clarke
Journal:  Acad Radiol       Date:  2007-11       Impact factor: 3.173

7.  Bag-of-frequencies: a descriptor of pulmonary nodules in computed tomography images.

Authors:  Francesco Ciompi; Colin Jacobs; Ernst Th Scholten; Mathilde M W Wille; Pim A de Jong; Mathias Prokop; Bram van Ginneken
Journal:  IEEE Trans Med Imaging       Date:  2014-11-20       Impact factor: 10.048

8.  Segmentation of pulmonary nodules in computed tomography using a regression neural network approach and its application to the Lung Image Database Consortium and Image Database Resource Initiative dataset.

Authors:  Temesguen Messay; Russell C Hardie; Timothy R Tuinstra
Journal:  Med Image Anal       Date:  2015-02-23       Impact factor: 8.545

Review 9.  Quantitative Computed Tomography Imaging Biomarkers in the Diagnosis and Management of Lung Cancer.

Authors:  Hyungjin Kim; Chang Min Park; Jin Mo Goo; Joachim E Wildberger; Hans-Ulrich Kauczor
Journal:  Invest Radiol       Date:  2015-09       Impact factor: 6.016

Review 10.  The solitary pulmonary nodule.

Authors:  Helen T Winer-Muram
Journal:  Radiology       Date:  2006-04       Impact factor: 11.105

View more
  8 in total

Review 1.  Lung Nodule Detection from Feature Engineering to Deep Learning in Thoracic CT Images: a Comprehensive Review.

Authors:  Amitava Halder; Debangshu Dey; Anup K Sadhu
Journal:  J Digit Imaging       Date:  2020-06       Impact factor: 4.056

2.  Efficient multiscale fully convolutional UNet model for segmentation of 3D lung nodule from CT image.

Authors:  Sundaresan A Agnes; Jeevanayagam Anitha
Journal:  J Med Imaging (Bellingham)       Date:  2022-05-11

3.  Longitudinal prediction of lung nodule invasiveness by sequential modelling with common clinical computed tomography (CT) measurements: a prediction accuracy study.

Authors:  Guangyu Tao; Dejun Shi; Lingming Yu; Chunji Chen; Zheng Zhang; Chang Min Park; Edyta Szurowska; Yinan Chen; Rui Wang; Hong Yu
Journal:  Transl Lung Cancer Res       Date:  2022-05

4.  Mix Contrast for COVID-19 Mild-to-Critical Prediction.

Authors:  Yongbei Zhu; Shuo Wang; Siwen Wang; Qingxia Wu; Liusu Wang; Hongjun Li; Meiyun Wang; Meng Niu; Yunfei Zha; Jie Tian
Journal:  IEEE Trans Biomed Eng       Date:  2021-11-19       Impact factor: 4.756

5.  Highly accurate model for prediction of lung nodule malignancy with CT scans.

Authors:  Jason L Causey; Junyu Zhang; Shiqian Ma; Bo Jiang; Jake A Qualls; David G Politte; Fred Prior; Shuzhong Zhang; Xiuzhen Huang
Journal:  Sci Rep       Date:  2018-06-18       Impact factor: 4.379

6.  Deep Learning-based Artificial Intelligence Improves Accuracy of Error-prone Lung Nodules.

Authors:  Chou-Chin Lan; Min-Shiau Hsieh; Jong-Kai Hsiao; Chih-Wei Wu; Hao-Hsiang Yang; Yi Chen; Po-Chun Hsieh; I-Shiang Tzeng; Yao-Kuang Wu
Journal:  Int J Med Sci       Date:  2022-03-06       Impact factor: 3.738

7.  Lung cancer diagnosis using deep attention-based multiple instance learning and radiomics.

Authors:  Junhua Chen; Haiyan Zeng; Chong Zhang; Zhenwei Shi; Andre Dekker; Leonard Wee; Inigo Bermejo
Journal:  Med Phys       Date:  2022-03-03       Impact factor: 4.506

8.  DICOM re-encoding of volumetrically annotated Lung Imaging Database Consortium (LIDC) nodules.

Authors:  Andrey Fedorov; Matthew Hancock; David Clunie; Mathias Brochhausen; Jonathan Bona; Justin Kirby; John Freymann; Steve Pieper; Hugo J W L Aerts; Ron Kikinis; Fred Prior
Journal:  Med Phys       Date:  2020-09-06       Impact factor: 4.071

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.