Literature DB >> 27987526

Molecular Phylogeny of Paraphelidium letcheri sp. nov. (Aphelida, Opisthosporidia).

Sergey A Karpov1,2, Guifré Torruella3, David Moreira3, Maria A Mamkaeva2, Purificación López-García3.   

Abstract

Aphelids remain poorly known parasitoids of algae and have recently raised considerable interest due to their phylogenetic position at the base of Holomycota. Together with Cryptomycota (Rozellosporidia) and Microsporidia, they have been recently re-classified as the Opisthosporidia, which constitutes the sister group to the fungi within the Holomycota. Molecular environmental studies have revealed a huge diversity of aphelids, but only four genera have been described: Aphelidium, Amoeboaphelidium, Paraphelidium, and Pseudaphelidium. Here, we describe the life cycle of a new representative of Aphelida, Paraphelidium letcheri sp. nov., and provide the 18S rRNA gene sequence for this species. Molecular phylogenetic analysis indicates that P. letcheri is sister to Paraphelidium tribonemae and together they form a monophyletic cluster which is distantly related to both, Aphelidium, with flagellated zoospores, and Amoebaphelidium, with amoeboid zoospores.
© 2016 The Author(s) Journal of Eukaryotic Microbiology © 2016 International Society of Protistologists.

Entities:  

Keywords:  Aphelids; Holomycota; Rozellosporidia; systematics; taxonomy

Mesh:

Substances:

Year:  2017        PMID: 27987526      PMCID: PMC5650051          DOI: 10.1111/jeu.12389

Source DB:  PubMed          Journal:  J Eukaryot Microbiol        ISSN: 1066-5234            Impact factor:   3.346


  10 in total

1.  MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform.

Authors:  Kazutaka Katoh; Kazuharu Misawa; Kei-ichi Kuma; Takashi Miyata
Journal:  Nucleic Acids Res       Date:  2002-07-15       Impact factor: 16.971

2.  A new isolate of Amoeboaphelidium protococcarum, and Amoeboaphelidium occidentale, a new species in phylum Aphelida (Opisthosporidia).

Authors:  Peter M Letcher; Martha J Powell; Salvador Lopez; Philip A Lee; Robert C McBride
Journal:  Mycologia       Date:  2015-02-06       Impact factor: 2.696

3.  Obligately phagotrophic aphelids turned out to branch with the earliest-diverging fungi.

Authors:  Sergey A Karpov; Kirill V Mikhailov; Gulnara S Mirzaeva; Iskandar M Mirabdullaev; Kira A Mamkaeva; Nina N Titova; Vladimir V Aleoshin
Journal:  Protist       Date:  2012-10-09

4.  Universal fungus-specific primer systems and group-specific hybridization oligonucleotides for 18S rDNA.

Authors:  R Kappe; C Fauser; C N Okeke; M Maiwald
Journal:  Mycoses       Date:  1996 Jan-Feb       Impact factor: 4.377

5.  Phylogenomics Reveals Convergent Evolution of Lifestyles in Close Relatives of Animals and Fungi.

Authors:  Guifré Torruella; Alex de Mendoza; Xavier Grau-Bové; Meritxell Antó; Mark A Chaplin; Javier del Campo; Laura Eme; Gregorio Pérez-Cordón; Christopher M Whipps; Krista M Nichols; Richard Paley; Andrew J Roger; Ariadna Sitjà-Bobadilla; Stuart Donachie; Iñaki Ruiz-Trillo
Journal:  Curr Biol       Date:  2015-09-10       Impact factor: 10.834

6.  Morphological and Genetic Diversity of Opisthosporidia: New Aphelid Paraphelidium tribonemae gen. et sp. nov.

Authors:  Sergey A Karpov; Victoria S Tcvetkova; Maria A Mamkaeva; Guifré Torruella; Hélène Timpano; David Moreira; Karomat S Mamanazarova; Purificación López-García
Journal:  J Eukaryot Microbiol       Date:  2016-08-23       Impact factor: 3.346

7.  Characterization of Amoeboaphelidium protococcarum, an algal parasite new to the cryptomycota isolated from an outdoor algal pond used for the production of biofuel.

Authors:  Peter M Letcher; Salvador Lopez; Robert Schmieder; Philip A Lee; Craig Behnke; Martha J Powell; Robert C McBride
Journal:  PLoS One       Date:  2013-02-20       Impact factor: 3.240

8.  RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies.

Authors:  Alexandros Stamatakis
Journal:  Bioinformatics       Date:  2014-01-21       Impact factor: 6.937

9.  Molecular phylogeny and ultrastructure of Aphelidium aff. melosirae (Aphelida, Opisthosporidia).

Authors:  Sergey A Karpov; Maria A Mamkaeva; Karim Benzerara; David Moreira; Purificación López-García
Journal:  Protist       Date:  2014-05-27

Review 10.  Morphology, phylogeny, and ecology of the aphelids (Aphelidea, Opisthokonta) and proposal for the new superphylum Opisthosporidia.

Authors:  Sergey A Karpov; Maria A Mamkaeva; Vladimir V Aleoshin; Elena Nassonova; Osu Lilje; Frank H Gleason
Journal:  Front Microbiol       Date:  2014-03-28       Impact factor: 5.640

  10 in total
  6 in total

1.  Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes.

Authors:  Sina M Adl; David Bass; Christopher E Lane; Julius Lukeš; Conrad L Schoch; Alexey Smirnov; Sabine Agatha; Cedric Berney; Matthew W Brown; Fabien Burki; Paco Cárdenas; Ivan Čepička; Lyudmila Chistyakova; Javier Del Campo; Micah Dunthorn; Bente Edvardsen; Yana Eglit; Laure Guillou; Vladimír Hampl; Aaron A Heiss; Mona Hoppenrath; Timothy Y James; Anna Karnkowska; Sergey Karpov; Eunsoo Kim; Martin Kolisko; Alexander Kudryavtsev; Daniel J G Lahr; Enrique Lara; Line Le Gall; Denis H Lynn; David G Mann; Ramon Massana; Edward A D Mitchell; Christine Morrow; Jong Soo Park; Jan W Pawlowski; Martha J Powell; Daniel J Richter; Sonja Rueckert; Lora Shadwick; Satoshi Shimano; Frederick W Spiegel; Guifré Torruella; Noha Youssef; Vasily Zlatogursky; Qianqian Zhang
Journal:  J Eukaryot Microbiol       Date:  2019-01       Impact factor: 3.346

2.  A taxonomic summary of Aphelidiaceae.

Authors:  Peter M Letcher; Martha J Powell
Journal:  IMA Fungus       Date:  2019-06-07       Impact factor: 3.515

3.  Global transcriptome analysis of the aphelid Paraphelidium tribonemae supports the phagotrophic origin of fungi.

Authors:  Guifré Torruella; Xavier Grau-Bové; David Moreira; Sergey A Karpov; John A Burns; Arnau Sebé-Pedrós; Eckhard Völcker; Purificación López-García
Journal:  Commun Biol       Date:  2018-12-19

4.  Evolutionary Genomics of Metchnikovella incurvata (Metchnikovellidae): An Early Branching Microsporidium.

Authors:  Luis Javier Galindo; Guifré Torruella; David Moreira; Hélène Timpano; Gita Paskerova; Alexey Smirnov; Elena Nassonova; Purificación López-García
Journal:  Genome Biol Evol       Date:  2018-10-01       Impact factor: 3.416

5.  A taxonomic summary and revision of Rozella (Cryptomycota).

Authors:  Peter M Letcher; Martha J Powell
Journal:  IMA Fungus       Date:  2018-11-16       Impact factor: 3.515

Review 6.  Basal Parasitic Fungi in Marine Food Webs-A Mystery Yet to Unravel.

Authors:  Doris Ilicic; Hans-Peter Grossart
Journal:  J Fungi (Basel)       Date:  2022-01-26
  6 in total

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