Literature DB >> 27983853

Quantifying the Heat Dissipation from a Molecular Motor's Transport Properties in Nonequilibrium Steady States.

Wonseok Hwang1, Changbong Hyeon1.   

Abstract

Theoretical analysis, which maps single-molecule time trajectories of a molecular motor onto unicyclic Markov processes, allows us to evaluate the heat dissipated from the motor and to elucidate its dependence on the mean velocity and diffusivity. Unlike passive Brownian particles in equilibrium, the velocity and diffusion constant of molecular motors are closely inter-related. In particular, our study makes it clear that the increase of diffusivity with the heat production is a natural outcome of active particles, which is reminiscent of the recent experimental premise that the diffusion of an exothermic enzyme is enhanced by the heat released from its own catalytic turnover. Compared with freely diffusing exothermic enzymes, kinesin-1, whose dynamics is confined on one-dimensional tracks, is highly efficient in transforming conformational fluctuations into a locally directed motion, thus displaying a significantly higher enhancement in diffusivity with its turnover rate. Putting molecular motors and freely diffusing enzymes on an equal footing, our study offers a thermodynamic basis to understand the heat-enhanced self-diffusion of exothermic enzymes.

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Year:  2016        PMID: 27983853     DOI: 10.1021/acs.jpclett.6b02657

Source DB:  PubMed          Journal:  J Phys Chem Lett        ISSN: 1948-7185            Impact factor:   6.475


  6 in total

1.  Allocating dissipation across a molecular machine cycle to maximize flux.

Authors:  Aidan I Brown; David A Sivak
Journal:  Proc Natl Acad Sci U S A       Date:  2017-10-03       Impact factor: 11.205

2.  How kinesin waits for ATP affects the nucleotide and load dependence of the stepping kinetics.

Authors:  Ryota Takaki; Mauro L Mugnai; Yonathan Goldtzvik; D Thirumalai
Journal:  Proc Natl Acad Sci U S A       Date:  2019-10-28       Impact factor: 11.205

3.  Energy Transport along α-Helix Protein Chains: External Drives and Multifractal Analysis.

Authors:  Narmin Sefidkar; Samira Fathizadeh; Fatemeh Nemati; Constantinos Simserides
Journal:  Materials (Basel)       Date:  2022-04-10       Impact factor: 3.748

4.  Chain organization of human interphase chromosome determines the spatiotemporal dynamics of chromatin loci.

Authors:  Lei Liu; Guang Shi; D Thirumalai; Changbong Hyeon
Journal:  PLoS Comput Biol       Date:  2018-12-03       Impact factor: 4.475

5.  Topology, landscapes, and biomolecular energy transport.

Authors:  Justin E Elenewski; Kirill A Velizhanin; Michael Zwolak
Journal:  Nat Commun       Date:  2019-10-11       Impact factor: 14.919

6.  Catalytic enzymes are active matter.

Authors:  Ah-Young Jee; Yoon-Kyoung Cho; Steve Granick; Tsvi Tlusty
Journal:  Proc Natl Acad Sci U S A       Date:  2018-11-01       Impact factor: 11.205

  6 in total

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