Literature DB >> 27974286

Points of View: Heat maps

Nils Gehlenborg, Bang Wong.   

Abstract

Mesh：

Year:  2012        PMID： 27974286     DOI： 10.1038/nmeth.1902

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   28.547


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  13 in total

1.  Genetic variants synthesize to produce paneth cell phenotypes that define subtypes of Crohn's disease.

Authors:  Kelli L VanDussen; Ta-Chiang Liu; Dalin Li; Fadi Towfic; Nir Modiano; Rachel Winter; Talin Haritunians; Kent D Taylor; Deepti Dhall; Stephan R Targan; Ramnik J Xavier; Dermot P B McGovern; Thaddeus S Stappenbeck
Journal:  Gastroenterology       Date:  2013-09-25       Impact factor: 22.682

2.  dendsort: modular leaf ordering methods for dendrogram representations in R.

Authors:  Ryo Sakai; Raf Winand; Toni Verbeiren; Andrew Vande Moere; Jan Aerts
Journal:  F1000Res       Date:  2014-07-30

3.  Visualizing cellular imaging data using PhenoPlot.

Authors:  Heba Z Sailem; Julia E Sero; Chris Bakal
Journal:  Nat Commun       Date:  2015-01-08       Impact factor: 14.919

Review 4.  Visualizing quantitative microscopy data: History and challenges.

Authors:  Heba Z Sailem; Sam Cooper; Chris Bakal
Journal:  Crit Rev Biochem Mol Biol       Date:  2016-02-24       Impact factor: 8.250

5.  Unboxing cluster heatmaps.

Authors:  Sophie Engle; Sean Whalen; Alark Joshi; Katherine S Pollard
Journal:  BMC Bioinformatics       Date:  2017-02-15       Impact factor: 3.169

6.  heatmaply: an R package for creating interactive cluster heatmaps for online publishing.

Authors:  Tal Galili; Alan O'Callaghan; Jonathan Sidi; Carson Sievert
Journal:  Bioinformatics       Date:  2018-05-01       Impact factor: 6.937

7.  MicroRNA Expression Changes in Women with Breast Cancer Stratified by DNA Repair Capacity Levels.

Authors:  Jarline Encarnación-Medina; Carmen Ortiz; Ralphdy Vergne; Luis Padilla; Jaime Matta
Journal:  J Oncol       Date:  2019-05-05       Impact factor: 4.375

8.  fluff: exploratory analysis and visualization of high-throughput sequencing data.

Authors:  Georgios Georgiou; Simon J van Heeringen
Journal:  PeerJ       Date:  2016-07-19       Impact factor: 2.984

9.  A new plan quality objective function for determining optimal collimator combinations in prostate cancer treatment with stereotactic body radiation therapy using CyberKnife.

Authors:  Maria Varnava; Iori Sumida; Hirokazu Mizuno; Hiroya Shiomi; Osamu Suzuki; Yasuo Yoshioka; Kazuhiko Ogawa
Journal:  PLoS One       Date:  2018-11-27       Impact factor: 3.240

10.  Immunosignature Analysis of Myalgic Encephalomyelitis/Chronic Fatigue Syndrome (ME/CFS).

Authors:  Oliver P Günther; Jennifer L Gardy; Phillip Stafford; Øystein Fluge; Olav Mella; Patrick Tang; Ruth R Miller; Shoshana M Parker; Stephen A Johnston; David M Patrick
Journal:  Mol Neurobiol       Date:  2018-10-08       Impact factor: 5.590
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