| Literature DB >> 27966636 |
Elina Väisänen1, Minna Paloniemi2,3, Inka Kuisma1, Väinö Lithovius1, Arun Kumar1,4, Rauli Franssila1, Kamruddin Ahmed5, Eric Delwart6,7, Timo Vesikari2, Klaus Hedman1,8, Maria Söderlund-Venermo1.
Abstract
Two human parvoviruses were recently discovered by metagenomics in Africa, bufavirus (BuV) in 2012 and tusavirus (TuV) in 2014. These viruses have been studied exclusively by PCR in stool and detected only in patients with diarrhoea, although at low prevalence. Three genotypes of BuV have been identified. We detected, by in-house EIA, BuV1-3 IgG antibodies in 7/228 children (3.1%) and 10/180 adults (5.6%), whereas TuV IgG was found in one child (0.4%). All children and 91% of the adults were Finnish, yet interestingly 3/6 adults of Indian origin were BuV-IgG positive. By competition EIA, no cross-reactivity between the BuVs was detected, indicating that the BuV genotypes represent distinct serotypes. Furthermore, we analysed by BuV qPCR stool and nasal swab samples from 955 children with gastroenteritis, respiratory illness, or both, and found BuV DNA in three stools (0.3%) and for the first time in a nasal swab (0.1%). This is the first study documenting the presence of BuV and TuV antibodies in humans. Although the seroprevalences of both viruses were low in Finland, our results indicate that BuV infections might be widespread in Asia. The BuV-specific humoral immune responses appeared to be strong and long-lasting, pointing to systemic infection in humans.Entities:
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Year: 2016 PMID: 27966636 PMCID: PMC5155296 DOI: 10.1038/srep39267
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Bufavirus DNA-positive children.
| No. | Sample type | BuV DNA quantity (copies per ml supernatant) | Age, gender | Sampling date | Symptoms | Other pathogens found |
|---|---|---|---|---|---|---|
| Swab | 4.6 × 103 | 20 months, M | 27.3.2011 | AGE + ARTI | swab: neg | |
| Stool | 2.1 × 102 | 4 yrs 5 months, F | 23.2.2010 | AGE | norovirus | |
| Stool | 8.5 × 102 | 23 months, F | 6.3.2011 | AGE | rotavirus, HBoV2 | |
| Stool | 1.6 × 103 | 10 months, F | 9.1.2011 | AGE + ARTI | norovirus |
*Only boca- and coronaviruses were tested from nasal swabs.
#An acute bocavirus 2 (HBoV2) infection was diagnosed based on serology in this child18. The corresponding stool and serum samples of this child were BuV-DNA negative.
Figure 1SDS-PAGE (a) and electron microscopy pictures (b) of VP2-VLPs of BuV1-3 and TuV.
Bufavirus IgG-positive adults with follow-up samples.
| Geographical background | Sampling date | Absorbance value (OD) without competition | |||||
|---|---|---|---|---|---|---|---|
| BuV1 IgG | BuV2 IgG | BuV3 IgG | TuV IgG | H5 IgG | |||
| Case 1 | Middle-East | 4.3.2010 | 0.030 | 0.040 | |||
| 24.9.2010 | 0.028 | 0.042 | |||||
| 22.12.2010 | 0.026 | 0.035 | |||||
| 19.7.2011 | 0.027 | 0.032 | |||||
| 18.2.2016 | 0.033 | 0.046 | |||||
| Case 2 | India | 6.1.2011 | 0.032 | 0.054 | 0.026 | 0.036 | |
| 19.7.2011 | 0.039 | 0.056 | 0.028 | 0.038 | |||
| Case 3 | India | 10.3.2010 | 0.040 | 0.061 | 0.041 | 0.037 | |
| 6.1.2011 | 0.025 | 0.046 | 0.029 | 0.024 | |||
| Case 4 | India | 11.3.2010 | 0.454 | 0.164 | 0.079 | 0.496 | |
| 9.4.2010 | 0.534 | 0.228 | 0.096 | 0.616 | |||
| Case 5 | Finland | 19.10.2009 | 0.069 | 0.022 | 0.020 | 0.050 | |
| 1.11.2011 | 0.084 | 0.028 | 0.020 | 0.055 | |||
| 21.1.2014 | 0.091 | 0.027 | 0.024 | 0.057 | |||
| 17.2.2016 | 0.126 | 0.034 | 0.029 | 0.076 | |||
The positives are indicated with bolded numbers. H5 = High5 insect cells.
*BuV2, BuV3 and H5 reactivity was completely blocked in competition assay by insect cell suspension, but not with the specific BuV VLP. The BuV1 result was blocked only with BuV1. See also Table 3.
#BuV2 reactivity was blocked with insect cell suspension, not by BuV2 VLP.
Examples of competition assay results. Specific blocking is demonstrated with bolded numbers.
| Blocking VLP/suspension | Case 1, sample taken 4.3.2010 | Case 4 | Case 13 | Case 16 | Case 18 | ||||
|---|---|---|---|---|---|---|---|---|---|
| Antigen in the well | Antigen in the well | Antigen in the well | Antigen in the well | Antigen in the well | |||||
| BuV1 | BuV2 | BuV3 | BuV1 | BuV2 | BuV3 | BuV2 | BuV3 | TuV | |
| none | 2.588 | 2.761 | 2.896 | 2.011 | 0.644 | 0.174 | 0.156 | 0.142 | 0.314 |
| BuV1 | 2.587 | 2.661 | 0.458 | 0.132 | 0.177 | 0.107 | 0.299 | ||
| BuV2 | 2.579 | 2.722 | 1.949 | 0.167 | 0.143 | 0.111 | 0.191 | ||
| BuV3 | 2.400 | 2.614 | 1.904 | 0.472 | 0.151 | 0.191 | 0.377 | ||
| TuV | 2.513 | 2.720 | 2.819 | 1.997 | 0.525 | 0.172 | 0.164 | 0.116 | |
| High5 insect cells | 2.638 | 2.845 | 2.954 | 2.016 | 0.211 | 0.116 | 0.401 | ||
*Case 4 is strongly IgG positive for both BuV1 and insect cells (also seen in Table 2). BuV2 and BuV3 VLPs have been shown to have insect cells impurities (data not shown), which causes more reactivity towards BuV2 and BuV3 antigens. This reactivity is completely blocked by insect cell suspension (marked with#), and the sample is therefore considered to be IgG positive only for BuV1 among the tested viral antigens. The blocking effect of BuV2 VLP towards BuV2 is interpreted to be caused by the insect cell impurities rather that the VLP itself.
§5x more blocking antigen was used to block the IgG reactivity.
Figure 2BuV and TuV IgG-positive adults and children.
The figure presents the EIA OD values from the samples. Blue x marks the BuV1 IgG level in the sample, red circle the BuV2 IgG level, green diamond the BuV3 IgG level and the black square the TuV IgG level. Below each result the following information is presented: Age, gender, geographical background (M-E = Middle-East, IND = India, CHN = China, FIN = Finland), case number and cohort.
Primers used for amplifying the VP2 gene of BuV1, 2 and 3 and TuV.
| Primer | Sequence |
|---|---|
| BuV1 VP2 fwd BamHI | TAggatccATGACTGACACACAAGATGTATCTGA |
| BuV1 VP2 rev SalI | ATTgtcgacTCCATTTTAGATTGTGTAGTTAGGCATAC |
| BuV2 VP2 fwd BamHI | TAggatccATGTCTGAAAGCAATGAAATTGGAG |
| BuV2 VP2 rev SalI | ATTgtcgacTTACATTGTGTAGTTAGGCATGGCTCT |
| BuV3 VP2 fwd BamHI | TAggatccATGTCCGAAAGCAATGAAATTGACG |
| BuV3 VP2 rev SalI | ATTgtcgacTTAGTATGTGTAGTTTGGCATTGCTC |
| TuV VP2 fwd BamHI | TAggatccATGGCAGCCTCTAGCTCAGACAGTG |
| TuV VP2 rev SalI | ATTgtcgacTTAGTAAACAGTAGAGGGTACAATTCTTC |