Literature DB >> 27966522

Corrigendum: Molecular characterization of a family 5 glycoside hydrolase suggests an induced-fit enzymatic mechanism.

Marcelo V Liberato, Rodrigo L Silveira, Érica T Prates, Evandro A de Araujo, Vanessa O A Pellegrini, Cesar M Camilo, Marco A Kadowaki, Mario de O Neto, Alexander Popov, Munir S Skaf, Igor Polikarpov.   

Abstract

Entities:  

Year:  2016        PMID: 27966522      PMCID: PMC5155316          DOI: 10.1038/srep36428

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


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. In this Article, the legend of Figure 5 is incorrect: (a) BlCel5B in the crystallographic and closed configuration; (b) Bacillus halodurans Cel5B (BhCel5B) (PDB id: 4V2X) (c) Piromyces rhizinflata GH5 endoglucanase (PDB id: 3AYR); (d) Clostridium cellulolyticum GH5 endoglucanase (PDB id: 1EDG); (e) Clostridium cellulovorans GH5 endoglucanase (PDB id: 3NDY); (f) Bacteroides ovatus GH5 xyloglucanase (PDB id: 3ZMR); (g) Paenibacillus pabuli GH5 xyloglucanase (PDB id: 2JEP); (h) Prevotella bryantii GH5 endoglucanase (PDB id: 3VDH); (i) Ruminiclostridium thermocellum multifunctional GH5 cellulase, xylanase and mannase (PDB id: 4IM4); (j) Bacteroidetes bacterium AC2a endocellulase (PDB id: 4YHE). should read: The main difference between BlCel5B and BhCel5B is that the latter exhibits a deeper cleft due to the presence of residue W181 in the loop between F177 and R185. We conjecture that this difference in the binding site architecture relates to the importance that the CBM46 plays in the BlCel5B enzymatic mechanism. In addition, the legend of Figure 6 is incorrect: The main difference between BlCel5B and BhCel5B is that the latter exhibits a deeper cleft due to the presence of residue W181 in the loop between F177 and R185. We conjecture that this difference in the binding site architecture relates to the importance that the CBM46 plays in the BlCel5B enzymatic mechanism. should read: (a) BlCel5B in the crystallographic and closed configuration; (b) Bacillus halodurans Cel5B (BhCel5B) (PDB id: 4V2X) (c) Piromyces rhizinflata GH5 endoglucanase (PDB id: 3AYR); (d) Clostridium cellulolyticum GH5 endoglucanase (PDB id: 1EDG); (e) Clostridium cellulovorans GH5 endoglucanase (PDB id: 3NDY); (f) Bacteroides ovatus GH5 xyloglucanase (PDB id: 3ZMR); (g) Paenibacillus pabuli GH5 xyloglucanase (PDB id: 2JEP); (h) Prevotella bryantii GH5 endoglucanase (PDB id: 3VDH); (i) Ruminiclostridium thermocellum multifunctional GH5 cellulase, xylanase and mannase (PDB id: 4IM4); (j) Bacteroidetes bacterium AC2a endocellulase (PDB id: 4YHE).
  3 in total

1.  A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis.

Authors:  Evan M Glasgow; Elias I Kemna; Craig A Bingman; Nicole L Ing; Kai Deng; Christopher M Bianchetti; Taichi E Takasuka; Trent R Northen; Brian G Fox
Journal:  J Biol Chem       Date:  2020-10-16       Impact factor: 5.157

2.  A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis.

Authors:  Evan M Glasgow; Elias I Kemna; Craig A Bingman; Nicole Ing; Kai Deng; Christopher M Bianchetti; Taichi E Takasuka; Trent R Northen; Brian G Fox
Journal:  J Biol Chem       Date:  2020-12-18       Impact factor: 5.157

3.  Identification and characterization of a novel glucomannanase from Paenibacillus polymyxa.

Authors:  Kuikui Li; Chaofeng Jiang; Haidong Tan; Junyan Li; Yali Xu; Dejian Tang; Xiaoming Zhao; Qishun Liu; Jianguo Li; Heng Yin
Journal:  3 Biotech       Date:  2021-02-18       Impact factor: 2.406

  3 in total

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