| Literature DB >> 27955677 |
Victor A Alegana1,2, Simon P Kigozi3,4, Joaniter Nankabirwa3,5, Emmanuel Arinaitwe3, Ruth Kigozi3, Henry Mawejje3, Maxwell Kilama3, Nick W Ruktanonchai6,7, Corrine W Ruktanonchai6,7, Chris Drakeley4, Steve W Lindsay8, Bryan Greenhouse9, Moses R Kamya3,5, David L Smith10, Peter M Atkinson6,11,12, Grant Dorsey9, Andrew J Tatem6,7.
Abstract
BACKGROUND: An increase in effective malaria control since 2000 has contributed to a decline in global malaria morbidity and mortality. Knowing when and how existing interventions could be combined to maximise their impact on malaria vectors can provide valuable information for national malaria control programs in different malaria endemic settings. Here, we assess the effect of indoor residual spraying on malaria vector densities in a high malaria endemic setting in eastern Uganda as part of a cohort study where the use of long-lasting insecticidal nets (LLINs) was high.Entities:
Keywords: Anopheles; Anopheles gambiae; Indoor Residual Spraying; Malaria; Modelling
Mesh:
Year: 2016 PMID: 27955677 PMCID: PMC5153881 DOI: 10.1186/s13071-016-1917-3
Source DB: PubMed Journal: Parasit Vectors ISSN: 1756-3305 Impact factor: 3.876
Fig. 1Median predicted average density of (a) An. gambiae (s.l.) and (b) An. funestus (s.l.) using household-level Bayesian spatio-temporal regression model with seasonal effects from September 2011 to December 2015. The bars represent the average observed counts while the solid line represents the median estimate. The dashed grey lines show the predicted 97.5% credible intervals. The median and quantiles are summarised quantities of posterior distribution. c The effect of season on both malaria vectors with bar plots for An. gambiae (s.l.) (97.5% credible interval) while the dashed line shows the median for An. funestus (s.l.) with the 97.5% credible interval shaded. Abbreviations: LLIN, long-lasting insecticidal nets; IRS, indoor residual spraying
Fig. 2Map showing the study region in eastern Uganda. The four maps show the average predicted An. gambiae (s.l.) and An. funestus (s.l.) relative density per household per night, respectively, before (a, b) and after (c, d) IRS based on the Bayesian spatio-temporal model. The maps are normalised by the mean at 100 m spatial resolution. Thus, the highest predicted pre-IRS density for An. gambiae (s.l.) was 2.4 times as high as the mean compared to a prediction of 7.6 for An. funestus (s.l.)
Model fit and comparison using goodness-of-fit parameters for An. gambiae (s.l.) and An. funestus (s.l.). Model 1 included environmental and climatic variables; random effects (household level and seasonal); intervention use; and spatial and temporal effects. Model 5, the least complex, included only climatic variables and random effects. RMSE and correlation were based on a holdout validation dataset selected randomly (n = 20) out of a total 107 households
| Vector species | Model | DIC | Model complexity | Marginal likelihood | RMSE | Correlation (Observed |
|---|---|---|---|---|---|---|
|
| Model 1 | 11083.56 | 122.05 | -5743.87 | 1.1059 | 0.7963 |
| Model 2 | 11080.09 | 119.87 | -5745.77 | 1.0565 | 0.7800 | |
| Model 3 | 11082.78 | 120.42 | -5757.49 | 1.0516 | 0.7777 | |
| Model 4 | 11330.18 | 58.34 | -5838.05 | 1.0883 | 0.7594 | |
| Model 5 | 11329.69 | 56.37 | -5827.67 | 1.0884 | 0.7592 | |
|
| Model 1 | 7188.35 | 134.51 | -3783.64 | 0.9657 | 0.6937 |
| Model 2 | 7221.12 | 129.62 | -3756.08 | 0.9615 | 0.6984 | |
| Model 3 | 7194.15 | 119.54 | -3764.33 | 0.9172 | 0.6930 | |
| Model 4 | 7385.89 | 51.22 | -3815.50 | 0.9259 | 0.6233 | |
| Model 5 | 7385.90 | 50.89 | -3806.26 | 0.9244 | 0.6252 |
Abbreviations: DIC Deviance information criterion, RMSE Root mean square error
Posterior rate ratio estimates and 97.5% credible interval (CI) for the best fitting model (Model 1) for An. gambiae (s.l.) and An. funestus (s.l.). The model includes all data range (2011–2015) and incorporates the effects of interventions. For the spatio-temporal specification, a parameter for the spatial range of influence is shown
| Variable |
|
| ||||||
|---|---|---|---|---|---|---|---|---|
| Mean | 2.5% | 50% | 97.5% | Mean | 2.5% | 50% | 97.5% | |
| Distance to water (estimated in km) | 0.8941 | 0.8520 | 0.8940 | 0.9367 | 0.8421 | 0.7819 | 0.8421 | 0.9064 |
| Elevation (m above sea level) | 0.9805 | 0.9162 | 0.9804 | 1.0520 | 1.0089 | 0.9294 | 1.0089 | 1.0955 |
| Night-time light (intensity) | 0.9749 | 0.9118 | 0.9748 | 1.0420 | – | – | – | – |
| EVI | 1.1434 | 1.0512 | 1.1433 | 1.2429 | 1.1606 | 1.0150 | 1.1605 | 1.3267 |
| Temperature (estimated in °C) | 0.9982 | 0.9166 | 0.9981 | 1.0868 | – | – | – | – |
| Precipitation (mm) | 1.0745 | 1.0185 | 1.0745 | 1.1331 | 0.9419 | 0.8438 | 0.9419 | 1.0475 |
| Number of households within 50 m | 0.9739 | 0.9153 | 0.9739 | 1.0371 | 0.9603 | 0.8885 | 0.9603 | 1.0384 |
| IRS | 0.5941 | 0.1432 | 0.5783 | 0.8577 | 0.1508 | 0.0144 | 0.1472 | 0.8495 |
| LLIN | 1.0026 | 0.9242 | 1.0025 | 1.0884 | 0.9770 | 0.8581 | 0.9769 | 1.1140 |
| Spatial range (km) for Matérn covariance | 4.6341 | 0.2772 | 4.6231 | 5.5876 | 2.2395 | 0.1996 | 2.2284 | 3.7029 |
Abbreviations: EVI Enhanced vegetation index, IRS Indoor residual spraying, LLIN Long lasting insecticide net