| Literature DB >> 27943120 |
Błaszczyk Ewa1, Mielżyńska-Švach Danuta2.
Abstract
Investigations on the impact of chemicals on the environment and human health have led to the development of an exposome concept. The exposome refers to the totality of exposures received by a person during life, including exposures to life-style factors, from the prenatal period to death. The exposure to genotoxic chemicals and their reactive metabolites can induce chemical modifications of DNA, such as, for example, DNA adducts, which have been extensively studied and which play a key role in chemically induced carcinogenesis. Development of different methods for the identification of DNA adducts has led to adopting DNA adductomic approaches. The ability to simultaneously detect multiple PAH-derived DNA adducts may allow for the improved assessment of exposure, and offer a mechanistic insight into the carcinogenic process following exposure to PAH mixtures. The major advantage of measuring chemical-specific DNA adducts is the assessment of a biologically effective dose. This review provides information about the occurrence of the polycyclic aromatic hydrocarbons (PAHs) and their influence on human exposure and biological effects, including PAH-derived DNA adduct formation and repair processes. Selected methods used for determination of DNA adducts have been presented.Entities:
Keywords: Benzo[a]pyrene; DNA damage; PAH–DNA adducts; Polycyclic aromatic hydrocarbons
Mesh:
Substances:
Year: 2016 PMID: 27943120 PMCID: PMC5509823 DOI: 10.1007/s13353-016-0380-3
Source DB: PubMed Journal: J Appl Genet ISSN: 1234-1983 Impact factor: 3.240
Fig. 1“Bay” and “fjord” regions in different PAH conformations
Fig. 2Metabolic activation pathways of benzo[a]pyrene (Lodovici et al. 2004)
Summary of analytical methods used for quantification of DNA adducts (Himmelstein et al. 2009)
| Methods | Sensitivity | Amount of DNA required | Advantages | Limitations |
|---|---|---|---|---|
| Accelerator mass spectrometry (AMS) | ∼1–10 adduct/1012 nt | 1–1,000 μg | High sensitivity; adducts originate from radiolabeled compound | Various requirements including the need for 14C/3H-labeled compound, complex sample preparation, and good purification of DNA to prevent interferences with contaminants including protein, specialized equipment not widely available, limited specificity due to the lack of structural information |
| GC-ECD | ∼1 adduct/1011 nt | 100 μg | High sensitivity | Requires (laborious) derivatization, internal standards, and specialized equipment |
| 32P-postlabeling | ∼1 adduct/1010 nt | 1–10 μg | Low amount of DNA required; sensitive and versatile | High levels of radioactivity are required; measures general damage but has limited specificity; adduct standards required for co-chromatography studies |
| HPLC-MS/MS | ∼1 adduct/109 nt | 10–100 μg | Structural identification; high accuracy (MRM mode) | Requires specialized equipment; may require internal standards |
| GC-MS | ∼1 adduct/109 nt | 10–500 μg | Structural identification | Requires derivatization, internal standards, and specialized equipment; in some GC-MS techniques there is a high risk of artifactual oxidative DNA damage |
| Radiolabeled binding assay | ∼1–10 adduct/108 nt | 0.5–3 mg | Simple (if negative result); adducts originate from radiolabeled compound | Radiolabeled (14C or 3H) compound required; no structural information available; interference with contaminants including protein (requires good purification of DNA) |
| HPLC fluorescence or electrochemical detection | ∼1–10 adduct/108 nt | 20–100 μg | Simple; robust method; inexpensive; the use of standards enables a limited amount of structural information | Only applicable for fluorescent/ electro-chemically active adducts; standards required |
| Immunoassay | ∼2.5 adduct/108 nt | 1–200 μg | Applies antibodies targeted at a specific DNA adduct | Risk of cross-reactivity with other adducts |
| Immunohistochemistry | Variable | – | Robust and easy; allows localization of adducts | Poor identification; semi-quantitative; limited structural information available based on the applied antibody |