Literature DB >> 27933727

Mapping of inhibitors and activity data to the human kinome and exploring promiscuity from a ligand and target perspective.

Ye Hu1, Ryo Kunimoto1, Jürgen Bajorath1.   

Abstract

An up-to-date collection of publicly available kinase inhibitors and activity data was mapped to the human kinome to comprehensively analyze current small molecule-kinase interactions. Compound distributions across the kinome were explored, structural relationships between inhibitors determined, and the tendency to form activity cliffs assessed. Furthermore, promiscuity was analyzed at the level of inhibitors and kinases, and a number of kinase targets with distinct preferences for single- or multitarget inhibitors were identified. Taken together, the results of current analysis provide a detailed view of kinase-inhibitor interaction characteristics across the human kinome.
© 2016 John Wiley & Sons A/S.

Entities:  

Keywords:  activity cliffs; activity data; human kinome; inhibitors; ligand and target promiscuity; matched molecular pairs; protein kinases

Mesh:

Substances:

Year:  2017        PMID: 27933727     DOI: 10.1111/cbdd.12919

Source DB:  PubMed          Journal:  Chem Biol Drug Des        ISSN: 1747-0277            Impact factor:   2.817


  3 in total

1.  Coral: Clear and Customizable Visualization of Human Kinome Data.

Authors:  Kathleen S Metz; Erika M Deoudes; Matthew E Berginski; Ivan Jimenez-Ruiz; Bulent Arman Aksoy; Jeff Hammerbacher; Shawn M Gomez; Douglas H Phanstiel
Journal:  Cell Syst       Date:  2018-08-29       Impact factor: 10.304

2.  Serine-Threonine Kinase TAO3-Mediated Trafficking of Endosomes Containing the Invadopodia Scaffold TKS5α Promotes Cancer Invasion and Tumor Growth.

Authors:  Shinji Iizuka; Manuela Quintavalle; Jose C Navarro; Kyle P Gribbin; Robert J Ardecky; Matthew M Abelman; Chen-Ting Ma; Eduard Sergienko; Fu-Yue Zeng; Ian Pass; George V Thomas; Shannon K McWeeney; Christian A Hassig; Anthony B Pinkerton; Sara A Courtneidge
Journal:  Cancer Res       Date:  2021-01-07       Impact factor: 13.312

3.  Fragment Binding to Kinase Hinge: If Charge Distribution and Local pKa Shifts Mislead Popular Bioisosterism Concepts.

Authors:  Matthias Oebbeke; Christof Siefker; Björn Wagner; Andreas Heine; Gerhard Klebe
Journal:  Angew Chem Int Ed Engl       Date:  2020-10-29       Impact factor: 15.336

  3 in total

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